Corynebacterium pseudotuberculosis (CIP 52.97, CCUG 43567, Krieger)

Name: Corynebacterium pseudotuberculosis (CIP 52.97, CCUG 43567, Krieger)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137801

Type strain

Strain Designation Krieger

Culture col. no. CIP 52.97 CCUG 43567 Krieger

NCBI tax ID(s) 935697 1719

Special Collections CCUG CIP

History CIP <- 1952, Lovell: strain Krieger CIP <- 1952, Lovell: strain Krieger

Links

Corynebacterium pseudotuberculosis Krieger is a microaerophile bacterium of the family Corynebacteriaceae.

microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 68061

CIP 52.97,CCUG 43567

@ref 20215

Last LPSN update 2026-05-29 08:39:07

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium pseudotuberculosis

Full scientific name Corynebacterium pseudotuberculosis (Buchanan 1911) Eberson 1918 (Approved Lists 1980)

Synonyms (1)

"Bacillus pseudotuberculosis"

BacDive ID	Other strains from **Corynebacterium pseudotuberculosis** (13)	Type strain
3113	C. pseudotuberculosis E23, DSM 20689, ATCC 19410, NCTC 3450, CCUG ... (type strain)
3109	C. pseudotuberculosis 2804, Songer 2804, DSM 7177, ATCC 43924
3110	C. pseudotuberculosis 2808, Songer 2808, DSM 7178, ATCC 43925
3111	C. pseudotuberculosis 169, Songer 169, DSM 7179, ATCC 43926
3112	C. pseudotuberculosis Brie, DSM 7180, ATCC 43927
134700	C. pseudotuberculosis CIP A93
135470	C. pseudotuberculosis CIP 58.3
135570	C. pseudotuberculosis Roi de Pique, CIP A95
135615	C. pseudotuberculosis CIP 59.46, CCUG 43568
137026	C. pseudotuberculosis Méd, CIP A94, CCUG 43566
137876	C. pseudotuberculosis PR, CIP 52.104
138684	C. pseudotuberculosis Fleming, CIP 52.103
145060	C. pseudotuberculosis CCUG 27541, NCTC 4655

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		93
125438		93.751	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
38740	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
38740	CIP Medium 3			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
38740	positive	growth	37
55941	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
55941	microaerophile
125439	obligate aerobe	94.864

Spore formation

@ref	Spore formation	Confidence
125439		99.597

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Equidae (Horse)
#Host Body-Site	#Organ	#Lymph node
#Infection	#Inflammation	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
38740		Kenya	KEN	Africa
55941	Horse lymphangitis	Kenya	KEN	Africa
38740	Animal, Horse, lymphangitis	Kenya	KEN	Africa

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
38740	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM22760v3 assembly for Corynebacterium pseudotuberculosis CIP 52.97	complete	GCA_000227605	935697.4	2511231153	935697	98.92

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	C.pseudotuberculosis 16S rRNA gene (CIP 52.97)	X81907	1396		1719

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM22760v3 assembly for Corynebacterium pseudotuberculosis CIP 52.97
BV-BRC: 935697.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	48.37	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.86	no
125439	motility	BacteriaNetⓘ	no	87.83	no
125439	spore_formation	BacteriaNetⓘ	no	99.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium pseudotuberculosis CIP 52.97 CIP 52.97
NCBI: GCA_000227605.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	93.75	no
125438	anaerobic	anaerobicⓘ	no	90.29	no
125438	aerobic	aerobicⓘ	no	61.58	yes
125438	spore-forming	spore-formingⓘ	no	82.10	no
125438	thermophilic	thermophileⓘ	no	94.50	yes
125438	flagellated	motile2+ⓘ	no	93.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	In silico approach to identify microsatellite candidate biomarkers to differentiate the biovar of Corynebacterium pseudotuberculosis genomes.	Pinheiro KDC, Gois BVA, Nogueira WG, Araujo FA, Queiroz ALC, Cardenas-Alegria O, da Silva ALDC, Junior AMGM, Ramos RTJ.	Front Bioinform	10.3389/fbinf.2022.931583	2022
Genetics	Pangenome analysis of Corynebacterium striatum: insights into a neglected multidrug-resistant pathogen.	Nageeb WM, Hetta HF.	BMC Microbiol	10.1186/s12866-023-02996-6	2023
	Commercially available tests for determining cefiderocol susceptibility display variable performance in the Achromobacter genus.	Jean-Pierre V, Sorlin P, Jeannot K, Chiron R, Lavigne JP, Pantel A, Marchandin H.	Ann Clin Microbiol Antimicrob	10.1186/s12941-024-00731-1	2024
	Multilocus Sequencing of Corynebacterium pseudotuberculosis Biotype Ovis Strains.	Sellyei B, Banyai K, Bartha D, Hajtos I, Fodor L, Makrai L.	Biomed Res Int	10.1155/2017/1762162	2017
	Cefiderocol susceptibility of Achromobacter spp.: study of an accurately identified collection of 230 strains.	Jean-Pierre V, Sorlin P, Pantel A, Chiron R, Lavigne JP, Jeannot K, Marchandin H, Collaborative study group on antimicrobial resistance of Achromobacter spp..	Ann Clin Microbiol Antimicrob	10.1186/s12941-024-00709-z	2024
Transcriptome	Tips and tricks for the assembly of a Corynebacterium pseudotuberculosis genome using a semiconductor sequencer.	Ramos RT, Carneiro AR, Soares Sde C, dos Santos AR, Almeida S, Guimaraes L, Figueira F, Barbosa E, Tauch A, Azevedo V, Silva A.	Microb Biotechnol	10.1111/1751-7915.12006	2013
Phylogeny	Evaluation of ERIC-PCR as genotyping method for Corynebacterium pseudotuberculosis isolates.	Dorneles EM, Santana JA, Ribeiro D, Dorella FA, Guimaraes AS, Moawad MS, Selim SA, Garaldi AL, Miyoshi A, Ribeiro MG, Gouveia AM, Azevedo V, Heinemann MB, Lage AP.	PLoS One	10.1371/journal.pone.0098758	2014
	Copper Alloy Touch Surfaces in Healthcare Facilities: An Effective Solution to Prevent Bacterial Spreading.	Colin M, Klingelschmitt F, Charpentier E, Josse J, Kanagaratnam L, De Champs C, Gangloff SC.	Materials (Basel)	10.3390/ma11122479	2018
	Genomic and phenotypic characterization of Borrelia afzelii BO23 and Borrelia garinii CIP 103362.	Bontemps-Gallo S, Lawrence KA, Richards CL, Gherardini FC.	PLoS One	10.1371/journal.pone.0199641	2018
Phylogeny	Clonal relationship and differentiation among Mycobacterium abscessus isolates as determined using the semiautomated repetitive extragenic palindromic sequence PCR-based DiversiLab system.	Mougari F, Raskine L, Ferroni A, Marcon E, Sermet-Gaudelus I, Veziris N, Heym B, Gaillard JL, Nassif X, Cambau E.	J Clin Microbiol	10.1128/jcm.03600-13	2014
Phylogeny	High-performance liquid chromatography of corynomycolic acids as a tool in identification of Corynebacterium species and related organisms.	De Briel D, Couderc F, Riegel P, Jehl F, Minck R.	J Clin Microbiol	10.1128/jcm.30.6.1407-1417.1992	1992
Genetics	Assessing the Genotypic Differences between Strains of Corynebacterium pseudotuberculosis biovar equi through Comparative Genomics.	Barauna RA, Ramos RT, Veras AA, Pinheiro KC, Benevides LJ, Viana MV, Guimaraes LC, Edman JM, Spier SJ, Azevedo V, Silva A	PLoS One	10.1371/journal.pone.0170676	2017
Genetics	Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya.	Cerdeira LT, Schneider MP, Pinto AC, de Almeida SS, dos Santos AR, Barbosa EG, Ali A, Aburjaile FF, de Abreu VA, Guimaraes LC, Soares Sde C, Dorella FA, Rocha FS, Bol E, Gomes de Sa PH, Lopes TS, Barbosa MS, Carneiro AR, Juca Ramos RT, Coimbra NA, Lima AR, Barh D, Jain N, Tiwari S, Raja R, Zambare V, Ghosh P, Trost E, Tauch A, Miyoshi A, Azevedo V, Silva A	J Bacteriol	10.1128/JB.06293-11	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38740	Collection of Institut Pasteur ; Curators of the CIP; CIP 52.97
#55941	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 43567
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Corynebacterium pseudotuberculosis (CIP 52.97, CCUG 43567, Krieger)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000227605

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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