Bacillus pumilus (CIP 102496, 520.86)

Name: Bacillus pumilus (CIP 102496, 520.86)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137576

Type strain

Strain Designation 520.86

Culture col. no. CIP 102496 520.86

NCBI tax ID(s) 1408

Special Collections CIP

History CIP <- 1986, Lab. Ident. Inst. Pasteur, Paris, France: strain 520.86 <- Meaux Hosp., Meaux, France

Links

Bacillus pumilus 520.86 is an obligate aerobe, Gram-positive, motile bacterium of the family Bacillaceae.

Gram-positive motile rod-shaped obligate aerobe Bacteria

Name and taxonomic classification

SI-ID 67407

CIP 102496

@ref 20215

Last LPSN update 2026-02-09 11:32:55

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Species Bacillus pumilus

Full scientific name Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

BacDive ID	Other strains from **Bacillus pumilus** (72)	Type strain
756	B. pumilus 272, DSM 27, ATCC 7061, CCM 2144, IFO 12092, ... (type strain)
749	B. pumilus 734a, 735, DSM 354, ATCC 71, CCM 1726
750	B. pumilus 734, 736, DSM 355, ATCC 72, CCM 1697, IFO ...
751	B. pumilus CIP3.83, Mill Hill, DSM 361, ATCC 14884, ...
752	B. pumilus E 601, E601, CCUG 24142, DSM 492, ATCC 27142, ...
753	B. pumilus 29, DSM 766
754	B. pumilus DSM 1794, NCIB 10822, CN 607
755	B. pumilus 236, 726, DSM 2893, ATCC 6631, IFO 12110, ...
757	B. pumilus G1R, DSM 5549, HER 1182
758	B. pumilus DSM 8786, DSM 46309, IMET 11026, NCIB 7198
759	B. pumilus ES 20, DSM 13835
760	B. pumilus ES1-184-2, DSM 30537
761	B. pumilus ES1-215-1, DSM 30550
762	B. pumilus ES2-8a2, DSM 30596
763	B. pumilus ES2-12c1, DSM 30606
764	B. pumilus FR2-W6Ac, DSM 30704
765	B. pumilus FR2-W7Aa, DSM 30708
766	B. pumilus FR2-W7Ab, DSM 30709
767	B. pumilus FR2-W8Aa, DSM 30714
768	B. pumilus W17/3, DSM 30786
769	B. pumilus ES2-W4c1, DSM 30628
770	B. pumilus FR2-S1Aa, DSM 30670
771	B. pumilus FR2-S4Aa, DSM 30672
772	B. pumilus FR2-S4Ab, DSM 30673
773	B. pumilus FR2-S7Ab, DSM 30678
774	B. pumilus FR2-S7Ac, DSM 30679
775	B. pumilus FR2-S11Aa-b, DSM 30681
776	B. pumilus FR2-W6Ab, DSM 30703
777	B. pumilus FR1-11con, DSM 30720
778	B. pumilus W20/5, DSM 30789
779	B. pumilus MW15/1, DSM 30805
780	B. pumilus TS1/1, DSM 30806
781	B. pumilus KO_PS 3, DSM 30833
130862	B. pumilus W2, DSM 100617
130861	B. pumilus T4_3, DSM 100541
22913	B. pumilus DSM 30004, ATCC 15716, DSM 15573, IFO 12605, ...
130168	B. pumilus b17_1, DSM 31005
130169	B. pumilus T2_3, DSM 30977
130170	B. pumilus T2_44, DSM 30997
131630	B. pumilus Stev13, DSM 103049
131631	B. pumilus Stev38, DSM 103053
131632	B. pumilus D35_1, DSM 103757
131633	B. pumilus C8_12, DSM 103869
134937	B. pumilus 7.87, CIP 102756
137078	B. pumilus CIP 51.18, CN 2731
138631	B. pumilus CIP 52.42
138682	B. pumilus H 634, CIP 101996
138686	B. pumilus CIP 102081
139688	B. pumilus T3_14, DSM 103904
141248	B. pumilus CCUG 397
141663	B. pumilus CCUG 4626
143929	B. pumilus CCUG 21924
144775	B. pumilus CCUG 26531
144948	B. pumilus CCUG 27243
144950	B. pumilus CCUG 27263
145355	B. pumilus CCUG 28267 B
146007	B. pumilus CCUG 30128
146237	B. pumilus CCUG 30686
147025	B. pumilus CCUG 32666
147795	B. pumilus CCUG 34244
148189	B. pumilus CCUG 35011
150505	B. pumilus CCUG 41443
151344	B. pumilus CCUG 43804
151785	B. pumilus CCUG 44877
151802	B. pumilus CCUG 44940
152656	B. pumilus CCUG 47302
153625	B. pumilus CCUG 50373 A
155159	B. pumilus CCUG 56623
156911	B. pumilus CCUG 66887
173512	B. pumilus CIMB23, CIMB 05-1841, CRBIP17.23
173513	B. pumilus CIMB 05-0968, CRBIP17.25
176402	B. pumilus 45.39, DSM 117807

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
38329	positive	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
38329	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
38329	CIP Medium 72		Medium recipe at CIP
38329	CIP Medium 3		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
38329	positive	growth	30

Physiology and metabolism

Oxygen tolerance

38329

Oxygen toleranceobligate aerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
38329	17632 ChEBI	nitrate	-	reduction
38329	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
38329	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
38329	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
38329	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
38329	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
38329	-	+	+	+	+	+	-	-	-	+	+	+	-	+	-	-	+	-	+	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
38329	not determinedn.d.	+	-	-	+	+	-	-	-	-	+/-	+	+	+	-	-	-	-	+	-	-	-	+	+	+	+	+	+	-	-	-	+	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
38329		Meaux	France	FRA	Europe
38329	Human, Blood	Meaux	France	FRA	Europe	1986

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
38329	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#38329	Collection of Institut Pasteur ; Curators of the CIP; CIP 102496
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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