Bacillus pumilus 272, NRS 272 | Type strain | DSM 27, ATCC 7061, CCM 2144, IFO 12092, JCM 2508, NBRC 12092, NCIB 9369, NCTC 10337

Strain identifier

BacDive ID: 756

Type strain:

Species: Bacillus pumilus

Strain Designation: 272, NRS 272

Culture col. no.: DSM 27, ATCC 7061, CCM 2144, IFO 12092, JCM 2508, NBRC 12092, NCIB 9369, NCTC 10337

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Application and interaction
Molecular biology
Strain availability

External links

Bacillus pumilus 272 is a mesophilic human pathogen of the family Bacillaceae.

human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	10-09-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Firmicutes
	Class	Bacilli
	Order	Caryophanales
	Family	Bacillaceae
	Genus	Bacillus
	Species	Bacillus pumilus
	Full Scientific Name (PNU)	Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

Information on morphological and physiological propertiesMorphology and physiology

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #22900]		alpha-glucosidase	-	3.2.1.20
[Ref.: #22900]		arginine dihydrolase	-	3.5.3.6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22900]	dextrin ChEBI	-	growth
[Ref.: #22900]	galactose ChEBI	+	growth
[Ref.: #22900]	gluconate ChEBI	+	growth
[Ref.: #22900]	glycogen ChEBI	-	growth
[Ref.: #22900]	L-arabinose ChEBI	+	growth
[Ref.: #22900]	N-acetyl-D-glucosamine ChEBI	+	growth
[Ref.: #22900]	nitrate ChEBI	-	reduction
[Ref.: #22900]	rhamnose ChEBI	-	growth
[Ref.: #22900]	starch ChEBI	-	growth

[Ref.: #2028]	Multimedia content
[Ref.: #2028]	Caption	DSM 27 Bacillus pumilus
[Ref.: #2028]	License/Copyright	(C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
[Ref.: #2028]	Intellectual property rights	© Leibniz-Institut DSMZ

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #2028]

Culture medium

Nutrient agar (NA)

[Ref.: #2028]

Culture medium growth

[Ref.: #2028]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #40218]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #40218]

Culture medium growth

[Ref.: #40218]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2028]			growth	30 ̊C
[Ref.: #40218]			growth	30 ̊C

[Ref.: #2028]	Temperature range	mesophilic
[Ref.: #40218]	Temperature range	mesophilic

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #2028]	Pathogenicity (human)	yes
[Ref.: #2028]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #2028]	GC-content	41.9 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #2028]	GC-content	40.7 mol%	Buoyant density centrifugation (BD)

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus 16S ribosomal RNA gene, partial sequence	DQ105967 ENA	16S	1449	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain 001T 16S ribosomal RNA gene, partial sequence	FJ477095 ENA	16S	650	1408 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig118, whole genome shotgun sequence	ABRX01000001 ENA	WGS	942069	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig113, whole genome shotgun sequence	ABRX01000002 ENA	WGS	610621	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig112, whole genome shotgun sequence	ABRX01000003 ENA	WGS	486567	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig115, whole genome shotgun sequence	ABRX01000004 ENA	WGS	483688	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig117, whole genome shotgun sequence	ABRX01000005 ENA	WGS	352324	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig110, whole genome shotgun sequence	ABRX01000006 ENA	WGS	330784	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig116, whole genome shotgun sequence	ABRX01000007 ENA	WGS	226251	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig108, whole genome shotgun sequence	ABRX01000008 ENA	WGS	114009	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig106, whole genome shotgun sequence	ABRX01000009 ENA	WGS	107335	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig107, whole genome shotgun sequence	ABRX01000010 ENA	WGS	67319	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig105, whole genome shotgun sequence	ABRX01000011 ENA	WGS	56310	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig104, whole genome shotgun sequence	ABRX01000012 ENA	WGS	30500	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig103, whole genome shotgun sequence	ABRX01000013 ENA	WGS	19406	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig101, whole genome shotgun sequence	ABRX01000014 ENA	WGS	2570	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig100, whole genome shotgun sequence	ABRX01000015 ENA	WGS	2395	536229 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig99, whole genome shotgun sequence	ABRX01000016 ENA	WGS	1850	536229 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus clone Bpumi-1F 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF478070 ENA	16S	416	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 gyrase B subunit-like gene, partial sequence	AY167869 ENA		1133	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 16S ribosomal RNA gene, partial sequence	AY876289 ENA	16S	1434	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 60 kDa chaperonin (cpn60) gene, partial cds	EF685215 ENA		552	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 16S ribosomal RNA gene, partial sequence	GQ911554 ENA	16S	803	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 DNA gyrase subunit B (gyrB) gene, partial cds	JN575338 ENA		841	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 PhoP (phoP) and PhoR (phoR) genes, partial cds	JN580978 ENA		1158	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 16S ribosomal RNA gene, partial sequence	JQ424887 ENA	16S	1456	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain CIP 52.67 16S ribosomal RNA gene, partial sequence	AY876045 ENA	16S	1065	1408 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Bacillus pumilus partial 16S rRNA gene, isolate OS-70	AM237370 ENA	16S	1459	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain DSMZ27 16S ribosomal RNA gene, partial sequence	AY456263 ENA	16S	1481	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain DSM27 DNA gyrase subunit A (gyrA) gene, partial cds	JX513936 ENA		459	1408 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus gene for 16S rRNA, partial sequence	AB006934 ENA	16S	274	1408 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus gene for 16S rRNA, partial sequence	AB271753 ENA	16S	1474	1408 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus fus gene for elongation factor G, partial cds, strain: NBRC 12092	AB353941 ENA		412	1408 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus rpoB gene for RNA polymerase beta subunit, partial cds, strain: NBRC 12092	AB353945 ENA		343	1408 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	B.pumilus 16S ribosomal RNA	X60637 ENA	16S	1427	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 16S ribosomal RNA gene, partial sequence	EU138517 ENA	16S	1167	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 gyrase subunit alpha (gyrA) gene, partial cds	EU138655 ENA		920	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 polymerase C (polC) gene, partial cds	EU138724 ENA		777	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 phosphoribosylaminoimidazolecarboxamide formyltransferase (purH) gene, partial cds	EU138793 ENA		872	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 RNA polymerase subunit beta (rpoB) gene, partial cds	EU138862 ENA		964	1408 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRS-272 GroEL (groEL) gene, partial cds	EU138586 ENA		835	1408 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Saccharomyces bayanus HDF2 gene, strain VKM508	AM296329 ENA		1866	4931 tax ID	*

Availability in culture collectionsStrain availability

[Ref.: #2028]

Culture collection no.

DSM 27, ATCC 7061, CCM 2144, IFO 12092, JCM 2508, NBRC 12092, NCIB 9369, NCTC 10337

[Ref.: #2028]

Strain history

<- ATCC <- N.R. Smith, 272 <- F. Löhnis <- Král <- O. Gottheil

[Ref.: #20218]

Associated Passport(s) in StrainInfo

4986, 4980, 4982, 4988, 4989, 333138, 4993, 4994

References

#2028

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22900

A. G. O'DONNELL, J. R. NORRIS, R. C. W. BERKELEY, D. CLAUS, T. KANEKO, N. A. LOGAN, R. NOZAKI: Characterization of Bacillus subtilis, Bacillus pumilus, Bacillus licheniformis, and Bacillus amyloliquefaciens by Pyrolysis Gas-Liquid Chromatography, Deoxyribonucleic Acid-Deoxyribonucleic Acid Hybridization, Biochemical Tests, and API Systems. IJSEM 30: 448 - 459 1980 ( DOI 10.1099/00207713-30-2-448 )

#40218 ; Curators of the CIP;
* These References are textmined

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