Bacillus pumilus 272, NRS 272 | Type strain | DSM 27, ATCC 7061, CCM 2144, IFO 12092, JCM 2508, NBRC 12092, NCIB 9369, NCTC 10337

Strain identifier

BacDive ID: 756

Type strain:

Species: Bacillus pumilus

Strain Designation: 272, NRS 272

Culture col. no.: DSM 27, ATCC 7061, CCM 2144, IFO 12092, JCM 2508, NBRC 12092, NCIB 9369, NCTC 10337

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #2028]	Domain	Bacteria
[Ref.: #2028]	Phylum	Firmicutes
[Ref.: #2028]	Class	Bacilli
[Ref.: #2028]	Order	Bacillales
[Ref.: #2028]	Family	Bacillaceae
[Ref.: #2028]	Genus	Bacillus
[Ref.: #2028]	Species	Bacillus pumilus
[Ref.: #2028]	Full Scientific Name	Bacillus pumilus Meyer and Gottheil 1901
[Ref.: #2028]	Strain Designation	272, NRS 272
[Ref.: #2028]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	19-11-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Firmicutes
[Ref.: #20215]	Class	Bacilli		Int. J. Syst. Bacteriol. 38:220
[Ref.: #20215]	Family	Bacillaceae		Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Genus	Bacillus	genus (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Species	Bacillus pumilus	species (AL)	Int. J. Syst. Bacteriol. 30:225
[Ref.: #20215]	Full Scientific Name	Bacillus pumilus Meyer and Gottheil 1901

Information on morphological and physiological propertiesMorphology and physiology

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #22900]		alpha-glucosidase	-	3.2.1.20
[Ref.: #22900]		arginine dihydrolase	-	3.5.3.6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22900]	Dextrin	-	growth
[Ref.: #22900]	Galactose	+	growth
[Ref.: #22900]	Gluconate	+	growth
[Ref.: #22900]	Glycogen	-	growth
[Ref.: #22900]	L-Arabinose	+	growth
[Ref.: #22900]	N-Acetyl-D-glucosamine	+	growth
[Ref.: #22900]	Nitrate	-	reduction
[Ref.: #22900]	Rhamnose	-	growth
[Ref.: #22900]	Starch	-	growth

[Ref.: #2028]	Multimedia content
[Ref.: #2028]	Caption	DSM 27 Bacillus pumilus
[Ref.: #2028]	License/Copyright	(C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
[Ref.: #2028]	Intellectual property rights	© Leibniz-Institut DSMZ

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #2028]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1), 30°C

[Ref.: #2028]

Culture medium growth

[Ref.: #2028]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #40218]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #40218]

Culture medium growth

[Ref.: #40218]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2028]			growth	30 ̊C
[Ref.: #40218]			growth	30 ̊C

[Ref.: #2028]	Temperature range	mesophilic
[Ref.: #40218]	Temperature range	mesophilic

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #2028]	Pathogenicity (human)	yes
[Ref.: #2028]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #2028]	GC-content	41.9 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #2028]	GC-content	40.7 mol%	Buoyant density centrifugation (BD)

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus 16S ribosomal RNA gene, partial sequence	DQ105967	16S	1449	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain 001T 16S ribosomal RNA gene, partial sequence	FJ477095	16S	650	1408	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig118, whole genome shotgun sequence	ABRX01000001	WGS	942069	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig113, whole genome shotgun sequence	ABRX01000002	WGS	610621	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig112, whole genome shotgun sequence	ABRX01000003	WGS	486567	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig115, whole genome shotgun sequence	ABRX01000004	WGS	483688	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig117, whole genome shotgun sequence	ABRX01000005	WGS	352324	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig110, whole genome shotgun sequence	ABRX01000006	WGS	330784	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig116, whole genome shotgun sequence	ABRX01000007	WGS	226251	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig108, whole genome shotgun sequence	ABRX01000008	WGS	114009	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig106, whole genome shotgun sequence	ABRX01000009	WGS	107335	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig107, whole genome shotgun sequence	ABRX01000010	WGS	67319	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig105, whole genome shotgun sequence	ABRX01000011	WGS	56310	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig104, whole genome shotgun sequence	ABRX01000012	WGS	30500	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig103, whole genome shotgun sequence	ABRX01000013	WGS	19406	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig101, whole genome shotgun sequence	ABRX01000014	WGS	2570	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig100, whole genome shotgun sequence	ABRX01000015	WGS	2395	536229	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Bacillus pumilus ATCC 7061 BAT.Contig99, whole genome shotgun sequence	ABRX01000016	WGS	1850	536229	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus clone Bpumi-1F 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF478070	16S	416	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 gyrase B subunit-like gene, partial sequence	AY167869		1133	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 16S ribosomal RNA gene, partial sequence	AY876289	16S	1434	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 60 kDa chaperonin (cpn60) gene, partial cds	EF685215		552	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 16S ribosomal RNA gene, partial sequence	GQ911554	16S	803	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 DNA gyrase subunit B (gyrB) gene, partial cds	JN575338		841	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 PhoP (phoP) and PhoR (phoR) genes, partial cds	JN580978		1158	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain ATCC 7061 16S ribosomal RNA gene, partial sequence	JQ424887	16S	1456	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain CIP 52.67 16S ribosomal RNA gene, partial sequence	AY876045	16S	1065	1408	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Bacillus pumilus partial 16S rRNA gene, isolate OS-70	AM237370	16S	1459	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain DSMZ27 16S ribosomal RNA gene, partial sequence	AY456263	16S	1481	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain DSM27 DNA gyrase subunit A (gyrA) gene, partial cds	JX513936		459	1408	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus gene for 16S rRNA, partial sequence	AB006934	16S	274	1408	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus gene for 16S rRNA, partial sequence	AB271753	16S	1474	1408	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus fus gene for elongation factor G, partial cds, strain: NBRC 12092	AB353941		412	1408	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Bacillus pumilus rpoB gene for RNA polymerase beta subunit, partial cds, strain: NBRC 12092	AB353945		343	1408	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	B.pumilus 16S ribosomal RNA	X60637	16S	1427	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 16S ribosomal RNA gene, partial sequence	EU138517	16S	1167	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 gyrase subunit alpha (gyrA) gene, partial cds	EU138655		920	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 polymerase C (polC) gene, partial cds	EU138724		777	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 phosphoribosylaminoimidazolecarboxamide formyltransferase (purH) gene, partial cds	EU138793		872	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRRL NRS-272 RNA polymerase subunit beta (rpoB) gene, partial cds	EU138862		964	1408	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bacillus pumilus strain NRS-272 GroEL (groEL) gene, partial cds	EU138586		835	1408	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Saccharomyces bayanus HDF2 gene, strain VKM508	AM296329		1866	4931	*

Availability in culture collectionsStrain availability

[Ref.: #2028]

Culture collection no.

DSM 27, ATCC 7061, CCM 2144, IFO 12092, JCM 2508, NBRC 12092, NCIB 9369, NCTC 10337

[Ref.: #2028]

Strain history

<- ATCC <- N.R. Smith, 272 <- F. Löhnis <- Král <- O. Gottheil

[Ref.: #20218]

Associated Passport(s) in StrainInfo

4986, 4980, 4982, 4988, 4989, 333138, 4993, 4994

References

#2028

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22900

A. G. O'DONNELL, J. R. NORRIS, R. C. W. BERKELEY, D. CLAUS, T. KANEKO, N. A. LOGAN, R. NOZAKI: Characterization of Bacillus subtilis, Bacillus pumilus, Bacillus licheniformis, and Bacillus amyloliquefaciens by Pyrolysis Gas-Liquid Chromatography, Deoxyribonucleic Acid-Deoxyribonucleic Acid Hybridization, Biochemical Tests, and API Systems. IJSEM 30: 448 - 459 1980 ( DOI 10.1099/00207713-30-2-448 )

#40218 ; Curators of the CIP;
* These References are textmined

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