Achromobacter xylosoxidans (CIP 71.33, JCM 9660, ATCC 27062)

Name: Achromobacter xylosoxidans (CIP 71.33, JCM 9660, ATCC 27062)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 136825

Type strain

Culture col. no. CIP 71.33 JCM 9660 ATCC 27062 IAM 12685 LMG 3429 1 more

NCBI tax ID(s) 85698

Special Collections JCM CIP

History 1971, E. Yabuuchi, Osaka, Japon: strain 563, Achromobacter xylosoxidans R. Hugh 2860. CIP <- 1971, E. Yabuuchi, Osaka, Japon: strain 563, Achromobacter xylosoxidans

Links

Achromobacter xylosoxidans CIP 71.33 is an obligate aerobe, mesophilic, Gram-negative prokaryote that was isolated from Ear discharge.

Gram-negative motile oval-shaped obligate aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 842

LMG 3429,ATCC 27062,NCTC 10808,JCM 9660,CIP 71.33,ATCC 17062,IAM 12685,NRRL B-4083

@ref 20215

Last LPSN update 2026-02-09 11:32:45

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Alcaligenaceae

Genus Achromobacter

Species Achromobacter xylosoxidans

Full scientific name Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981

Synonyms (4)

"Achromobacter xylosoxidans"
Alcaligenes xylosoxidans
"Alcaligenes xylosoxydans"
Alcaligenes denitrificans subsp. xylosoxydans

BacDive ID	Other strains from **Achromobacter xylosoxidans** (73)	Type strain
298	A. xylosoxidans DPK1, DSM 6388
299	A. xylosoxidans T7, DSM 11852
130853	A. xylosoxidans JP-22, DSM 29570
136806	A. xylosoxidans Dr Paris, CIP 58.72, JCM 20749, GIFU 1054, ...
136808	A. xylosoxidans 325, CIP 62.30, JCM 20673, IAM 12596, LMG ...
136809	A. xylosoxidans 532.85, CIP 101719
136822	A. xylosoxidans plu, CIP 68.19, NBIMCC 152
136823	A. xylosoxidans X86, CIP 61.20, NBIMCC 151, CCUG 723, LMG ...
136824	A. xylosoxidans 51.83, CIP 100029
136827	A. xylosoxidans 11.83, CIP 100005
136839	A. xylosoxidans 232-86, CIP 102274
136840	A. xylosoxidans 503-86, CIP 102498
136847	A. xylosoxidans 1032-85, CIP 102041
136851	A. xylosoxidans 93.9, CIP 104044
136857	A. xylosoxidans CIP 100697
136859	A. xylosoxidans 762-85, CIP 101902
136861	A. xylosoxidans 93.3, CIP 104045
136862	A. xylosoxidans N°2, CIP 104124
136863	A. xylosoxidans 76.80, CIP 105843
136867	A. xylosoxidans 253-86, CIP 102288
136868	A. xylosoxidans 111-86, CIP 102198
136869	A. xylosoxidans CIP 103961, ATCC 9220, NCTC 8764, CCUG 2349, ...
136870	A. xylosoxidans 28443, CIP 103938
136871	A. xylosoxidans CIP 100117
137238	A. xylosoxidans 205-86, CIP 102236
137436	A. xylosoxidans 618-86, CIP 102630
137451	A. xylosoxidans 761-86, CIP 102744
137546	A. xylosoxidans 21-87, CIP 102768
137633	A. xylosoxidans 1030-85, CIP 102062
138417	A. xylosoxidans 126-87, CIP 102864
141242	A. xylosoxidans CCUG 367
141290	A. xylosoxidans CCUG 716
141346	A. xylosoxidans CCUG 1142
141367	A. xylosoxidans CCUG 1205
141418	A. xylosoxidans CCUG 1668
141444	A. xylosoxidans CCUG 1869
141477	A. xylosoxidans CCUG 2160
141483	A. xylosoxidans CCUG 2203
142343	A. xylosoxidans CCUG 11894
142779	A. xylosoxidans CCUG 14603
142780	A. xylosoxidans CCUG 14608
145154	A. xylosoxidans CCUG 27767 B
147214	A. xylosoxidans CCUG 33068
149224	A. xylosoxidans CCUG 37295
150714	A. xylosoxidans CCUG 42034
150731	A. xylosoxidans CCUG 42111
151658	A. xylosoxidans CCUG 44552
152509	A. xylosoxidans CCUG 46971
152571	A. xylosoxidans CCUG 47074
152684	A. xylosoxidans CCUG 47354
152776	A. xylosoxidans CCUG 47596
152828	A. xylosoxidans CCUG 47723
154348	A. xylosoxidans CCUG 53197
154449	A. xylosoxidans CCUG 53665
155054	A. xylosoxidans CCUG 56295
155276	A. xylosoxidans CCUG 57172
155881	A. xylosoxidans CCUG 59527
155975	A. xylosoxidans CCUG 59837
156009	A. xylosoxidans CCUG 60034
156412	A. xylosoxidans CCUG 61615
156471	A. xylosoxidans CCUG 61957, LMG 1865
156472	A. xylosoxidans CCUG 61958, LMG 3466
157260	A. xylosoxidans CCUG 72784
162987	A. xylosoxidans JCM 20745, CDC B6949, GIFU 954, IAM 12686, ...
162988	A. xylosoxidans JCM 20747, GIFU 1044, IAM 12688
162989	A. xylosoxidans JCM 20748, GIFU 1047, IAM 12689
166051	A. xylosoxidans JCM 9656, ATCC 27063
166058	A. xylosoxidans JCM 9787
174336	A. xylosoxidans Dres_AchromXyl_01, DSM 113262
174337	A. xylosoxidans Dres_AchromXyl_02, DSM 113263
174338	A. xylosoxidans Dres_AchromXyl_10, DSM 113276
176394	A. xylosoxidans Dres_AchromXyl_05, DSM 120188
176395	A. xylosoxidans Dres_AchromXyl_07, DSM 120632

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
125439	negative		92.6
125438	negative		97.328
36490	negative	oval-shaped

Colony morphology

36490

Hemolysis ability1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
36490	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
36490	CIP Medium 3			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
36490	positive	growth	37	mesophilic
36490	positive	growth	15-41
36490	negative	growth	5
36490	negative	growth	45
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
36490	obligate aerobe
125438	aerobe	90.563
125439	obligate aerobe	94.6

Spore formation

@ref	Spore formation	Confidence
125439		92.7

Halophily

@ref	Salt	Growth	Tested relation	Concentration
36490	NaCl	positive	growth	0-6 %
36490	NaCl		growth	8 %
36490	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
36490	16947 ChEBI	citrate	+	carbon source
36490	4853 ChEBI	esculin	-	hydrolysis
36490	606565 ChEBI	hippurate	-	hydrolysis
36490	15792 ChEBI	malonate	-	assimilation
36490	17632 ChEBI	nitrate	+	builds gas from
36490	17632 ChEBI	nitrate	+	reduction
36490	17632 ChEBI	nitrate	+	respiration
36490	16301 ChEBI	nitrite	+	builds gas from
36490	16301 ChEBI	nitrite	+	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
36490	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
36490	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
36490	15688 ChEBI	acetoin	-
36490	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
36490	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
36490	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
36490	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
36490	caseinase	-	3.4.21.50
36490	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
36490	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
36490	gamma-glutamyltransferase	-	2.3.2.2
36490	gelatinase	-
36490	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
36490	lipase	-
68382	lipase (C 14)	-		from API zym
36490	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
36490	ornithine decarboxylase	-	4.1.1.17
36490	oxidase	+
36490	phenylalanine ammonia-lyase	-	4.3.1.24
36490	protease	-
68382	trypsin	-	3.4.21.4	from API zym
36490	tryptophan deaminase	-
36490	tween esterase	-
36490	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
36490	-	-	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
36490	not determinedn.d.	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	+	+	+	+	+	-	+	-	-	-	-	+	-	+	+	-	-	-	+	-	-	-	-	-	-	-	+	-	+	+	-	+	+	+	+	-	-	-	-	-	-	+	+	+	+	+	+	+	-	+	+	+

Isolation, sampling and environmental information

Isolation

@ref	Sample type
67770	Ear discharge
36490	Human, Ear

Taxonmaps

69479

Global distribution of 16S sequence LC506137 (>99% sequence identity) for Achromobacter from Microbeatlas

Aquatic Samples	362
Soil Samples	273
Animal Samples	742
Plant Samples	143
Total Samples	1520

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
36490	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	44257_A01 assembly for Achromobacter xylosoxidans NCTC10808	complete	GCA_900475575	85698.131	2841492466	85698	95.07

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Achromobacter xylosoxidans JCM 9660 gene for 16S ribosomal RNA, partial sequence	LC506137	1453		85698

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Achromobacter xylosoxidans NCTC10808
NCBI: GCA_900475575

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	92.70	no
125439	motility	BacteriaNetⓘ	yes	81.80	no
125439	gram_stain	BacteriaNetⓘ	negative	92.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Achromobacter xylosoxidans NCTC10808
NCBI: GCA_900475575.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.33	no
125438	anaerobic	anaerobicⓘ	no	97.91	no
125438	aerobic	aerobicⓘ	yes	90.56	yes
125438	spore-forming	spore-formingⓘ	no	88.13	no
125438	thermophilic	thermophileⓘ	no	99.00	yes
125438	flagellated	motile2+ⓘ	yes	84.35	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Neonatal meningitis caused by Achromobacter xylosoxidans.	Namnyak SS, Holmes B, Fathalla SE.	J Clin Microbiol	10.1128/jcm.22.3.470-471.1985	1985
Phylogeny	Strains of Achromobacter xylosoxidans from clinical material.	Holmes B, Snell JJ, Lapage SP.	J Clin Pathol	10.1136/jcp.30.7.595	1977
Phylogeny	Identification of Gram-negative non-fermenters and oxidase-positive fermenters by the Oxi/Ferm tube.	Holmes B, Dowling J, Lapage SP.	J Clin Pathol	10.1136/jcp.32.1.78	1979

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#36490	Collection of Institut Pasteur ; Curators of the CIP; CIP 71.33
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Achromobacter xylosoxidans (CIP 71.33, JCM 9660, ATCC 27062)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API biotype100

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900475575

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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