Name: Limimaricola hongkongensis UST950701-009W
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 13676

Type strain:

Species: Limimaricola hongkongensis

Strain Designation: UST950701-009W

Culture col. no.: DSM 17493, JCM 12480, NRRL B-41040

Strain history: S. Lau UST950701-009W.

NCBI tax ID(s): 278132 (species)

SI-ID 231906

JCM 12480, NRRL B-41040, DSM 17493

Special Collections

DSMZ
JCM

Other strains from Limimaricola hongkongensis

Section

When using BacDive for research please cite our paper

Limimaricola hongkongensis UST950701-009W is a mesophilic bacterium that was isolated from 7-day-old marine biofilm.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Limimaricola*
	Species	**Limimaricola hongkongensis**
	Full Scientific Name (LPSN)	Limimaricola hongkongensis (Lau et al. 2004) Wirth and Whitman 2018

Synonym

Loktanella hongkongensis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7020]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #7020]

Culture medium growth

[Ref.: #7020]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7020]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7020]			growth	30 °C
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7020]	Sample type/isolated from	7-day-old marine biofilm
[Ref.: #7020]	Country	Hong Kong
[Ref.: #7020]	Country ISO 3 Code	HKG
[Ref.: #7020]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Marine biofilm in Hong Kong waters
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Biofilm	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY600301 (>99% sequence identity) for Limimaricola from Microbeatlas

Aquatic Samples	3059
Soil Samples	214
Animal Samples	378
Plant Samples	76
Total Samples	3727

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7020]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7020]	Loktanella hongkongensis strain UST950701-009W 16S ribosomal RNA gene, partial sequence	AY600301	1336	GenBank ENA	278132 tax ID

[Ref.: #67770]

GC-content

65.8-66.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #7020]

Culture collection no.

DSM 17493, JCM 12480, NRRL B-41040

[Ref.: #82859]

SI-ID 231906

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Loktanella hongkongensis sp. nov., a novel member of the alpha-Proteobacteria originating from marine biofilms in Hong Kong waters.	Lau SCK, Tsoi MMY, Li X, Plakhotnikova I, Wu M, Wong PK, Qian PY	Int J Syst Evol Microbiol	10.1099/ijs.0.63294-0	2004	*

References

#7020

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17493

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#82859

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID231906.1 )

* These data were automatically processed and therefore are not curated

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