Limimaricola hongkongensis UST950701-009P | Type strain | DSM 17492, JCM 12479, NRRL B-41039, CIP 108639 | BacDiveID:13675

Strain identifier

BacDive ID: 13675

Type strain:

Species: Limimaricola hongkongensis

Strain Designation: UST950701-009P

Culture col. no.: DSM 17492, JCM 12479, NRRL B-41039, CIP 108639

Strain history: CIP <- 2005, JCM <- S. Lau: strain UST950701-009P

NCBI tax ID(s): 1122180 (strain), 278132 (species)

SI-ID 134437

JCM 12479, NRRL B-41039, CIP 108639, DSM 17492

Other strains from Limimaricola hongkongensis

L. hongkongensis UST950701-009W, DSM 17493, JCM ...

Section

Limimaricola hongkongensis UST950701-009P is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from 7-day-old marine biofilm in Hong Kong waters.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Limimaricola*
	Species	**Limimaricola hongkongensis**
	Full Scientific Name (LPSN)	Limimaricola hongkongensis (Lau et al. 2004) Wirth and Whitman 2018

Synonym

Loktanella hongkongensis

Information on morphological and physiological properties Morphology

[Ref.: #31318]	Gram stain	negative
[Ref.: #119962]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %97.998
[Ref.: #69480]	Gram stain	negative Confidence in %97.998

[Ref.: #31318]	Cell shape	rod-shaped
[Ref.: #119962]	Cell shape	rod-shaped

[Ref.: #31318]	Motility	no
[Ref.: #119962]	Motility	yes

Pigment production

yes

Multimedia content

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Information on culture and growth conditions Culture and growth conditions

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

Marine agar (MA)

Culture medium growth

Culture medium composition

expand / minimize

[Ref.: #119962]

Culture medium

CIP Medium 13

[Ref.: #119962]

Culture medium growth

[Ref.: #119962]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #7019]			growth	30 °C
[Ref.: #31318]			growth	08-44 °C
[Ref.: #31318]			optimum	26 °C
[Ref.: #36757]			growth	30 °C
[Ref.: #67770]			growth	30 °C
[Ref.: #119962]			growth	15-37 °C
[Ref.: #119962]		no	growth	5 °C
[Ref.: #119962]		no	growth	41 °C

	pH	Kind of pH		pH
[Ref.: #31318]			optimum	7.5
[Ref.: #31318]			growth	05-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31318]	Oxygen tolerance	aerobe
[Ref.: #119962]	Oxygen tolerance	obligate aerobe

[Ref.: #31318]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %96.199
[Ref.: #69480]	Ability of spore formation	no Confidence in %96.199

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31318]		NaCl		growth	02-14	%
[Ref.: #31318]		NaCl		optimum	8	%
[Ref.: #119962]		NaCl		growth	0-10	%

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]		amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31318]		arabinose ChEBI	+	carbon source
[Ref.: #68371]		arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68371]		cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #119962]		citrate ChEBI	-	carbon source
[Ref.: #68371]		D-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-fucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68371]		D-lyxose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #119962]		esculin ChEBI	+	hydrolysis
[Ref.: #68371]		esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68369]		esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #31318]		fructose ChEBI	+	carbon source
[Ref.: #68371]		galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68371]		gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		gluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #31318]		glucose ChEBI	+	carbon source
[Ref.: #119962]		glucose ChEBI	-	degradation
[Ref.: #68371]		glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68369]		L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-xylose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]		maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31318]		mannitol ChEBI	+	carbon source
[Ref.: #68371]		melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #119962]		nitrate ChEBI	+	reduction
[Ref.: #119962]		nitrate ChEBI	-	respiration
[Ref.: #68369]		nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #119962]		nitrite ChEBI	-	reduction
[Ref.: #68371]		Potassium 2-ketogluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		Potassium 5-ketogluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #119962]		sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #68371]		starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31318]		sucrose ChEBI	+	carbon source
[Ref.: #68369]		tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68371]		turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		urea ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68371]		xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31318]		xylose ChEBI	+	carbon source
		Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #119962]		indole ChEBI	no
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #119962]		acetoin ChEBI	-
[Ref.: #119962]		glucose ChEBI		-
[Ref.: #68369]		indole ChEBI			-	* from API 20NE

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #68382]		acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #119962]		alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]		alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]		alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]		alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]		alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]		alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #119962]		amylase	-
[Ref.: #68369]		arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #119962]		beta-galactosidase	+	3.2.1.23
[Ref.: #68382]		beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68369]		beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68382]		beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]		beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119962]		caseinase	-	3.4.21.50
[Ref.: #31318]		catalase	+	1.11.1.6
[Ref.: #119962]		catalase	+	1.11.1.6
[Ref.: #68382]		cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #31318]		cytochrome oxidase	+	1.9.3.1
[Ref.: #119962]		gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #119962]		gelatinase	-
[Ref.: #68369]		gelatinase	-		* from API 20NE
[Ref.: #119962]		lecithinase	-
[Ref.: #68382]		leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #119962]		lipase	-
[Ref.: #68382]		lipase (C 14)	-		* from API zym
[Ref.: #119962]		lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]		N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]		naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119962]		ornithine decarboxylase	-	4.1.1.17
[Ref.: #119962]		oxidase	+
[Ref.: #119962]		phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68382]		trypsin	-	3.4.21.4	* from API zym
[Ref.: #119962]		tryptophan deaminase	-
[Ref.: #119962]		tween esterase	-
[Ref.: #119962]		urease	-	3.5.1.5
[Ref.: #68369]		urease	-	3.5.1.5	* from API 20NE
		Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #7019]	24898	-	-	-	-	-	+	-	+	+	-	+	+	-	+	+	-	+/-	+	+/-	-	not determinedn.d.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #119962]	11338	not determinedn.d.	+/-	-	+	+	+	+/-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+/-	+/-	-	-	+/-	-	-	-	-	-	+	+/-	+	-	-	-	+	+	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #7019]	14200	-	+	-	+/-	-	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-
[Ref.: #119962]	11351	-	+	+	+	-	+	+	-	-	-	-	-	+	-	-	+	-	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7019]	Sample type/isolated from	7-day-old marine biofilm in Hong Kong waters
[Ref.: #7019]	Country	China
[Ref.: #7019]	Country ISO 3 Code	CHN
[Ref.: #7019]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Marine biofilm in Hong Kong waters

[Ref.: #119962]	Sample type/isolated from	Marine biofilms
[Ref.: #119962]	Geographic location (country and/or sea, region)	Hong Kong
[Ref.: #119962]	Country	China
[Ref.: #119962]	Country ISO 3 Code	CHN
[Ref.: #119962]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Biofilm	-

What are isolation sources categories?

Global distribution of 16S sequence AY600300 (>99% sequence identity) for Limimaricola from Microbeatlas

Aquatic Samples	3059
Soil Samples	214
Animal Samples	378
Plant Samples	76
Total Samples	3727

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7019]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119962]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7019]	Loktanella hongkongensis strain UST950701-009P 16S ribosomal RNA gene, partial sequence	AY600300	1407	GenBank ENA	278132 tax ID
[Ref.: #20218]	Loktanella hongkongensis strain NRRL B-41039 16S ribosomal RNA gene, partial sequence	DQ915609	1306	GenBank ENA	278132 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Limimaricola hongkongensis DSM 17492 UST950701-009P	GCA_000365005	scaffold	GenBank ENA	1122180 tax ID
[Ref.: #66792]	Limimaricola hongkongensis DSM 17492	GCA_000600975	scaffold	GenBank ENA	1122180 tax ID	*
[Ref.: #66792]	Loktanella hongkongensis DSM 17492	1122180.14	plasmid	PATRIC	1122180 tax ID	*
[Ref.: #66792]	Loktanella hongkongensis DSM 17492	1122180.3	wgs	PATRIC	1122180 tax ID	*
[Ref.: #66792]	Loktanella hongkongensis DSM 17492	1122180.13	plasmid	PATRIC	1122180 tax ID	*
[Ref.: #66792]	Loktanella hongkongensis DSM 17492	1122180.6	wgs	PATRIC	1122180 tax ID	*

[Ref.: #7019]	GC-content	65.9 mol%
[Ref.: #67770]	GC-content	65.5-66.3 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Limimaricola hongkongensis DSM 17492 DSM 17492 NCBI: GCA_000600975.2
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Limimaricola hongkongensis DSM 17492 DSM 17492 NCBI: GCA_000600975.1
[Ref.: #69480]	motile	yes	56.219	no
[Ref.: #69480]	flagellated	no	87.296	yes
[Ref.: #69480]	gram-positive	no	97.998	yes
[Ref.: #69480]	anaerobic	no	96.807	yes
[Ref.: #69480]	halophile	yes	75.589	yes
[Ref.: #69480]	spore-forming	no	96.199	yes
[Ref.: #69480]	thermophile	no	94.946	yes
[Ref.: #69480]	glucose-util	yes	90.764	no
[Ref.: #69480]	aerobic	yes	92.55	no
[Ref.: #69480]	glucose-ferment	no	89.776	yes
[Ref.: #69480]	motile	yes	56.219	no
[Ref.: #69480]	flagellated	no	87.296	yes
[Ref.: #69480]	gram-positive	no	97.998	yes
[Ref.: #69480]	anaerobic	no	96.807	yes
[Ref.: #69480]	halophile	yes	75.589	yes
[Ref.: #69480]	spore-forming	no	96.199	yes
[Ref.: #69480]	thermophile	no	94.946	yes
[Ref.: #69480]	glucose-util	yes	90.764	no
[Ref.: #69480]	aerobic	yes	92.55	no
[Ref.: #69480]	glucose-ferment	no	89.776	yes

Availability in culture collections External links

Culture collection no.

DSM 17492, JCM 12479, NRRL B-41039, CIP 108639

SI-ID 134437

*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marivivens aquimaris sp. nov., isolated from seawater.	Kim JA, Lee B, Kang JY, Song JJ, Choi JH	Arch Microbiol	10.1007/s00203-021-02305-7	2021	*
Genetics	Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group.	Lau SC, Riedel T, Fiebig A, Han J, Huntemann M, Petersen J, Ivanova NN, Markowitz V, Woyke T, Goker M, Kyrpides NC, Klenk HP, Qian PY	Stand Genomic Sci	10.1186/s40793-015-0050-9	2015	*
Phylogeny	Loktanella soesokkakensis sp. nov., isolated from the junction between the North Pacific Ocean and a freshwater spring.	Park S, Lee JS, Lee KC, Yoon JH	Antonie Van Leeuwenhoek	10.1007/s10482-013-9962-9	2013	*
Phylogeny	Loktanella cinnabarina sp. nov., isolated from a deep subseafloor sediment, and emended description of the genus Loktanella.	Tsubouchi T, Shimane Y, Mori K, Miyazaki M, Tame A, Uematsu K, Maruyama T, Hatada Y	Int J Syst Evol Microbiol	10.1099/ijs.0.043174-0	2012	*
Phylogeny	Loktanella hongkongensis sp. nov., a novel member of the alpha-Proteobacteria originating from marine biofilms in Hong Kong waters.	Lau SCK, Tsoi MMY, Li X, Plakhotnikova I, Wu M, Wong PK, Qian PY	Int J Syst Evol Microbiol	10.1099/ijs.0.63294-0	2004	*

References

#7019

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17492

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#31318

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27633 (see below)

#36757 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68369

Automatically annotated from API 20NE .

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#82858

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID134437.1 )

#119962 Collection of Institut Pasteur ; Curators of the CIP; CIP 108639

#27633

IJSEM 2281 2004 ( DOI 10.1099/ijs.0.63294-0 , PubMed 15545471 )

* These data were automatically processed and therefore are not curated

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