Aggregatibacter aphrophilus CIP 70.73 is a microaerophile, Gram-negative, oval-shaped bacterium that was isolated from Blood.
Gram-negative oval-shaped microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pasteurellales |
| Family Pasteurellaceae |
| Genus Aggregatibacter |
| Species Aggregatibacter aphrophilus |
| Full scientific name Aggregatibacter aphrophilus (Khairat 1940) Nørskov-Lauritsen and Kilian 2006 |
| Synonyms (2) |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 35024 | MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml) | |||
| 35024 | CIP Medium 10 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68381 | 17716 ChEBI | lactose | + | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 35024 | 17632 ChEBI | nitrate | + | reduction | |
| 35024 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | + | builds acid from | from API 50CH acid |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | + | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 35024 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Chebi-ID | Metabolite | Voges-proskauer-test | |
|---|---|---|---|---|
| 68381 | 15688 ChEBI | acetoin | - | from API rID32STR |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 35024 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68381 | alkaline phosphatase | + | 3.1.3.1 | from API rID32STR |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 35024 | beta-galactosidase | + | 3.2.1.23 | |
| 68381 | beta-galactosidase | + | 3.2.1.23 | from API rID32STR |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 35024 | catalase | - | 1.11.1.6 | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 35024 | lysine decarboxylase | - | 4.1.1.18 | |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 35024 | ornithine decarboxylase | - | 4.1.1.17 | |
| 35024 | oxidase | - | ||
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 35024 | urease | - | 3.5.1.5 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35024 | not determinedn.d. | + | - | - | - | - | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | + | - | + | + | - | - | + | + | + | - | - | + | - | - | - | - | - | - | + | - | + |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44685 | - | - | + | - | - | + | - | - | - | + | + | - | + | - | - | - | - | - | + | - | - | - | - | - | - | + | - | - | - | - | - | - |
| @ref | Sample type | Isolation date | |
|---|---|---|---|
| 35024 | Blood | 1939 |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 35024 | 2 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 45532_F02 assembly for Aggregatibacter aphrophilus ATCC 33389 NCTC5906 | complete | 985008 | 99.33 | ||||
| 66792 | ASM22649v3 assembly for Aggregatibacter aphrophilus ATCC 33389 | contig | 985008 | 67.78 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Aggregatibacter aphrophilus strain CIP 70.73 16S ribosomal RNA gene, partial sequence. | EU083529 | 1506 | 985008 | ||
| 124043 | Aggregatibacter aphrophilus ATCC 33389 16S ribosomal RNA gene, partial sequence. | M75041 | 1479 | 985008 | ||
| 124043 | Aggregatibacter aphrophilus ATCC 33389 strain CCUG 3715 16S ribosomal RNA gene, partial sequence. | AY362906 | 1362 | 985008 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | gram_stain | BacteriaNetⓘ | negative | 65.98 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 74.98 | no |
| 125439 | motility | BacteriaNetⓘ | no | 71.70 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.44 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 93.11 | yes |
| 125438 | aerobic | aerobicⓘ | no | 85.07 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 90.49 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 88.66 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Gilbert's Syndrome and the Gut Microbiota - Insights From the Case-Control BILIHEALTH Study. | Zohrer PA, Hana CA, Seyed Khoei N, Molzer C, Hormann-Wallner M, Tosevska A, Doberer D, Marculescu R, Bulmer AC, Herbold CW, Berry D, Wagner KH. | Front Cell Infect Microbiol | 10.3389/fcimb.2021.701109 | 2021 | |
| Enzymology | New real-time PCR-based method for Kingella kingae DNA detection: application to samples collected from 89 children with acute arthritis. | Ilharreborde B, Bidet P, Lorrot M, Even J, Mariani-Kurkdjian P, Liguori S, Vitoux C, Lefevre Y, Doit C, Fitoussi F, Pennecot G, Bingen E, Mazda K, Bonacorsi S. | J Clin Microbiol | 10.1128/jcm.00144-09 | 2009 | |
| Phylogeny | Evolutionary Divergence of Aggregatibacter actinomycetemcomitans. | Kittichotirat W, Bumgarner RE, Chen C. | J Dent Res | 10.1177/0022034515608163 | 2016 | |
| Laboratory Diagnosis of 37 Cases of Bartonella Endocarditis Based on Enzyme Immunoassay and Real-Time PCR. | Shapira L, Rasis M, Binsky Ehrenreich I, Maor Y, Katchman EA, Treves A, Velan A, Halutz O, Graidy-Varon M, Leibovitch C, Maisler N, Ephros M, Giladi M. | J Clin Microbiol | 10.1128/jcm.02217-20 | 2021 | ||
| Phylogeny | The reference strain Aeromonas hydrophicla CIP 57.50 should be reclassified as Aeromonas salmonicida CIP 57.50. | Minana-Galbis D, Farfan M, Loren JG, Fuste MC. | Int J Syst Evol Microbiol | 10.1099/ijs.0.017939-0 | 2010 | |
| Oral Bacteriome and Mycobiome across Stages of Oral Carcinogenesis. | Heng W, Wang W, Dai T, Jiang P, Lu Y, Li R, Zhang M, Xie R, Zhou Y, Zhao M, Duan N, Ye Z, Yan F, Wang X. | Microbiol Spectr | 10.1128/spectrum.02737-22 | 2022 | ||
| Identification of the pangenome and its components in 14 distinct Aggregatibacter actinomycetemcomitans strains by comparative genomic analysis. | Kittichotirat W, Bumgarner RE, Asikainen S, Chen C. | PLoS One | 10.1371/journal.pone.0022420 | 2011 | ||
| Enzymology | Rapid identification of oral isolates of Aggregatibacter actinomycetemcomitans obtained from humans and primates by an ultrafast super convection based polymerase chain reaction. | Karched M, Furgang D, Sawalha N, Fine DH. | J Microbiol Methods | 10.1016/j.mimet.2012.01.016 | 2012 | |
| Serum antibodies to commensal oral and gut bacteria vary with age. | Percival RS, Marsh PD, Challacombe SJ. | FEMS Immunol Med Microbiol | 10.1111/j.1574-695x.1996.tb00356.x | 1996 | ||
| Age-related changes in salivary antibodies to commensal oral and gut biota. | Percival RS, Marsh PD, Challacombe SJ. | Oral Microbiol Immunol | 10.1111/j.1399-302x.1997.tb00367.x | 1997 | ||
| Pathogenicity | A concerted probiotic activity to inhibit periodontitis-associated bacteria. | Jansen PM, Abdelbary MMH, Conrads G. | PLoS One | 10.1371/journal.pone.0248308 | 2021 | |
| Phylogeny | 16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria. | Watts GS, Youens-Clark K, Slepian MJ, Wolk DM, Oshiro MM, Metzger GS, Dhingra D, Cranmer LD, Hurwitz BL. | J Appl Microbiol | 10.1111/jam.13590 | 2017 | |
| Pathogenicity | Antimicrobial effects of o-cymen-5-ol and zinc, alone & in combination in simple solutions and toothpaste formulations. | Pizzey RL, Marquis RE, Bradshaw DJ. | Int Dent J | 10.1111/j.1875-595x.2011.00047.x | 2011 | |
| In Vitro Cultivation of 'Unculturable' Oral Bacteria, Facilitated by Community Culture and Media Supplementation with Siderophores. | Vartoukian SR, Adamowska A, Lawlor M, Moazzez R, Dewhirst FE, Wade WG. | PLoS One | 10.1371/journal.pone.0146926 | 2016 | ||
| Phylogeny | Development of a real-time fluorescence resonance energy transfer PCR to detect arcobacter species. | Abdelbaqi K, Buissonniere A, Prouzet-Mauleon V, Gresser J, Wesley I, Megraud F, Menard A. | J Clin Microbiol | 10.1128/jcm.00256-07 | 2007 | |
| Phylogeny | An updated phylogeny of the Alphaproteobacteria reveals that the parasitic Rickettsiales and Holosporales have independent origins. | Munoz-Gomez SA, Hess S, Burger G, Lang BF, Susko E, Slamovits CH, Roger AJ. | Elife | 10.7554/elife.42535 | 2019 | |
| Phylogeny | Recognition of individual genes in diverse microorganisms by cycling primed in situ amplification. | Kenzaka T, Tamaki S, Yamaguchi N, Tani K, Nasu M. | Appl Environ Microbiol | 10.1128/aem.71.11.7236-7244.2005 | 2005 | |
| Metabolism | Nuclear translocation of NF-kappaB in lipopolysaccharide-treated macrophages fails to correspond to endotoxicity: evidence suggesting a requirement for a gamma interferon-like signal. | Denlinger LC, Garis KA, Sommer JA, Guadarrama AG, Proctor RA, Bertics PJ. | Infect Immun | 10.1128/iai.66.4.1638-1647.1998 | 1998 | |
| Bacterial symbionts in oral niche use type VI secretion nanomachinery for fitness increase against pathobionts. | Oscarsson J, Bao K, Shiratsuchi A, Grossmann J, Wolski W, Aung KM, Lindholm M, Johansson A, Mowsumi FR, Wai SN, Belibasakis GN, Bostanci N. | iScience | 10.1016/j.isci.2024.109650 | 2024 | ||
| Role of OmpA1 and OmpA2 in Aggregatibacter actinomycetemcomitans and Aggregatibacter aphrophilus serum resistance. | Lindholm M, Min Aung K, Nyunt Wai S, Oscarsson J. | J Oral Microbiol | 10.1080/20002297.2018.1536192 | 2019 | ||
| Laser-assisted microbial culturomics. | Qu T, Koch L, Mukherjee R, Tu Y, Seidel AL, Puttmann LD, Winkel A, Yang I, Grischke J, Liu D, Wolkers WF, Kittler S, Chichkov B, Stiesch M, Szafranski SP. | Nat Commun | 10.1038/s41467-025-66804-7 | 2025 | ||
| Hepatic Abscess Caused by Aggregatibacter kilianii in an Immunocompetent Active Duty Male, Case Report. | Watkins JT, Cresta JA, Boatwright MA. | Mil Med | 10.1093/milmed/usaf303 | 2025 | ||
| An unusual presentation of a large lower extremity abscess caused by Aggregatibacter aphrophilus: A case report. | Higuchi T, Araki Y, Saito M, Taninaka A, Demura S. | Int J Surg Case Rep | 10.1016/j.ijscr.2025.111971 | 2025 | ||
| Rational design of N-glycosyltransferases from Aggregatibacter aphrophilus to synthesize Gal-modified glycoconjugates targeting hepatocellular carcinoma cells. | Yu Y, Yang J, Liu Y, Liu Z, Zhou P, Mao W, Kong Y, Zhou J, Rong Y, Chen M. | Int J Biol Macromol | 10.1016/j.ijbiomac.2024.138609 | 2025 | ||
| Brain Abscess Caused by Streptococcus intermedius and Aggregatibacter aphrophilus Secondary to Exfoliation of a Deciduous Tooth in a Previously Healthy Child: A Case Report. | Noda K, Miura H, Kozawa K, Muto J, Yoshikawa T. | Cureus | 10.7759/cureus.80591 | 2025 | ||
| Phylogeny | Facet joint arthritis as the presenting symptom for culture-negative Aggregatibacter aphrophilus native valve endocarditis in a patient without known cardiac disease: a case report. | Okuyama Y, Kikuchi K, Stephenson SD, Nishioka N, Doi T, Yamagishi J, Yuda S. | BMC Infect Dis | 10.1186/s12879-025-10913-7 | 2025 | |
| A rare case of infantile acute polymicrobial dacryocystitis due to Serratia marcescens, Haemophilus aphrophilus, and Prevotellaintermedia. | Shenouda M, Kakouri A, McCulley TJ, Chen Y. | J AAPOS | 10.1016/j.jaapos.2024.104019 | 2024 | ||
| [Brain abscess due to Aggregatibacter aphrophilus]. | Gomez Pastrana JC. | Medicina (B Aires) | 2024 | |||
| Aggregatibacter aphrophilus-associated Sphenoid Sinusitis Causing Orbital Cellulitis, Meningitis, and Venous Sinus Thrombosis. | Ohashi N, Kawamura Y, Kamijima S, Watanabe R, Yamazaki S, Matsushima N, Tazawa KI. | Intern Med | 10.2169/internalmedicine.3965-24 | 2025 | ||
| A Case Report of Acute Infective Endocarditis Caused by Aggregatibacter aphrophilus Involving the Tricuspid Valve. | Jesus A, Lopes M, Martins P, Pires A. | Cureus | 10.7759/cureus.64412 | 2024 | ||
| Epidemiological Insights into HACEK Bacteria: A Seven-year Retrospective Analysis at a Tertiary Care Center in Istanbul. | Dundar T, Habip Z, Kocoglu ME, Ozekinci T. | Medeni Med J | 10.4274/mmj.galenos.2025.69327 | 2025 | ||
| AGGREGATIBACTER ENDOPHTHALMITIS IN A PATIENT WITH DENTOPHOBIA. | Mejaddam A, Pircher A. | Retin Cases Brief Rep | 10.1097/icb.0000000000001335 | 2024 | ||
| Pathogenicity | Aggregatibacteraphrophilus T6SS Effectors in Host-Bacterial Interactions. | Bao K, Oscarsson J, Gehring P, Grossmann J, Belibasakis GN, Bostanci N. | J Dent Res | 10.1177/00220345251337745 | 2025 | |
| Aggregatibacter aphrophilus and Eikenella corrodens: a case of brain abscess. | Lo Biundo C, Bongiovanni A, Tumbiolo S, Sucato A, Fasciana T, Giammanco A, Diquattro O. | New Microbiol | 2023 | |||
| Subdural empyema caused by Aggregatibacter segnis: a rare case report and literature review. | Li Q, Fan X, Wang K, Wu X, Li J, An Y, Wei P, Shi W, Shan Y, Chen S, Zhao G. | BMC Infect Dis | 10.1186/s12879-025-11479-0 | 2025 | ||
| Pancytopenia Unraveled: Tracing Rare Cardiobacterium hominis Bacteremia Back to the Gut. | Kleynerman A, Day RC, Honkanen I. | Cureus | 10.7759/cureus.86358 | 2025 | ||
| Mitral Valve Repair in a 15-Month-Old Child With Kingella kingae Endocarditis. | McGee MD, Coyne SA, Contractor RN, Winburn B. | Cureus | 10.7759/cureus.63670 | 2024 | ||
| Brain Abscess Mimicking Brain Tumors: A Systematic Review of Individual Patient's Data. | Choucha A, De Simone M, Beucler N, Hulot S, Lagier JC, Dufour H. | Asian J Neurosurg | 10.1055/s-0045-1802623 | 2025 | ||
| Invasive Aggregatibacter infection: shedding light on a rare pathogen in a retrospective cohort analysis. | Bapat A, Lucey O, Eckersley M, Ciesielczuk H, Ranasinghe S, Lambourne J. | J Med Microbiol | 10.1099/jmm.0.001612 | 2022 | ||
| Challenges and Insights in Aggregatibacter aphrophilus endocarditis: a review of literature. | Zacarias Mendoza NV, Gamarra Valverde NN, Robles Velarde VJ. | Arch Peru Cardiol Cir Cardiovasc | 10.47487/apcyccv.v4i3.306 | 2023 | ||
| Case Report: The First Case of Bloodstream Infection Complicated with Psoas Abscess and Pulmonary Infection Caused by Aggregatibacter aphrophilus in China. | Lu B, Shi Y, Zhou Y, Zhao F, Wang M, Pan X. | Infect Drug Resist | 10.2147/idr.s381360 | 2022 | ||
| Bacterial endocarditis with AACEK (HACEK) organisms. | Kuohn LR, Ro R, Bamira D, Vainrib A, Freedberg R, Galloway A, Williams MR, Saric M. | Echocardiography | 10.1111/echo.15440 | 2022 | ||
| A rare case of voluminous brain abscess due to Actinomyces meyeri and Aggregatibacter aphrophilus: is there any evidence for a prolonged antibiotic oral relay? | Altdorfer A, De Cassem J, Gavage P, Mathonet PY, Guzman-Suarez S, Moerman F. | J Infect Chemother | 10.1016/j.jiac.2021.02.005 | 2021 | ||
| Characterization of Disease Patterns in Children with Intracranial Abscesses for Enhanced Clinical Decision-Making. | Middelkamp M, Kania MM, Groth FS, Ricklefs FL, Duhrsen L. | Pediatr Rep | 10.3390/pediatric16040085 | 2024 | ||
| The application value and challenges of metagenomic next-generation sequencing in the diagnosis of periprosthetic joint infection after arthroplasty. | Huang H, Tong Y, Hu X, Liao FK, Chen R. | Front Med (Lausanne) | 10.3389/fmed.2025.1686503 | 2025 | ||
| Response to electroconvulsive therapy is associated with a more diverse oral microbiome- a prospective longitudinal cohort pilot study. | Ammer-Herrmenau C, Hamm J, Neesse A, Gunther K, Besse M, Zilles-Wegner D. | Eur Arch Psychiatry Clin Neurosci | 10.1007/s00406-025-01976-3 | 2025 | ||
| Exploration of Shoulder Abscess Association With Prompt Aggregatibacter aphrophilus Growth in Infective Endocarditis. | Bagheri S, Takahashi N, Ramirez VR, Jayasekara DK. | Cureus | 10.7759/cureus.23107 | 2022 | ||
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| Aggregatibacter actinomycetemcomitans and Aggregatibacter aphrophilus in a Kenyan Maasai Adolescent Population and Inhibition of Leukotoxic Activity by Herbal Plants Used as Part of Oral Hygiene Procedures. | Lindholm M, Claesson R, Kemoli A, Mulli T, Oscarsson J, Haubek D, Johansson A, Johansson A. | J Clin Med | 10.3390/jcm10225402 | 2021 | ||
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| Evaluation of Optimal Blood Culture Incubation Time To Maximize Clinically Relevant Results from a Contemporary Blood Culture Instrument and Media System. | Ransom EM, Alipour Z, Wallace MA, Burnham CA. | J Clin Microbiol | 10.1128/jcm.02459-20 | 2021 | ||
| A pilot study of the use of the oral and faecal microbiota for the diagnosis of ulcerative colitis and Crohn's disease in a paediatric population. | Monleon-Getino A, Pujol-Muncunill G, Mendez Viera J, Alvarez Carnero L, Sanseverino W, Paytuvi-Gallart A, Martin de Carpi J. | Front Pediatr | 10.3389/fped.2023.1220976 | 2023 | ||
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| Supragingival microbiome alternations as a consequence of smoking different tobacco types and its relation to dental caries. | Al-Marzooq F, Al Kawas S, Rahman B, Shearston JA, Saad H, Benzina D, Weitzman M. | Sci Rep | 10.1038/s41598-022-06907-z | 2022 | ||
| Phylogeny | Identifying the oral microbiome of adolescents with and without dental fluorosis based on full-length 16S rRNA gene sequencing. | Luo S, Shao R, Hong Y, Zhang T, Zhou Q, Zhou Q, Rao F, Zhao X, Dong Y, Zhu R, Ling P, Cui G, Guan Z, Luo P, He Y, Qi X, Liao J, Hong W. | Front Microbiol | 10.3389/fmicb.2024.1296753 | 2024 | |
| Pediatric subperiosteal orbital abscess characterization and prediction of size, location, and management. | McCoy JL, Dixit R, Dohar JE, Tobey ABJ. | Int J Pediatr Otorhinolaryngol | 10.1016/j.ijporl.2021.110693 | 2021 | ||
| Vertebral Osteomyelitis, Discitis, and Epidural Abscess: A Rare Complication of Cardiobacterium Endocarditis. | Yadava SK, Eranki A. | J Investig Med High Impact Case Rep | 10.1177/2324709618807504 | 2018 | ||
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| Leukocyte Esterase and Glucose Reagent Test Can Rule in and Rule out Septic Arthritis. | Kolbeck L, Haertle M, Graulich T, Ettinger M, Suero EM, Krettek C, Omar M. | In Vivo | 10.21873/invivo.12420 | 2021 | ||
| Pathogenicity | Analysis of the fecal and oral microbiota in chronic recurrent multifocal osteomyelitis. | Rausch P, Hartmann M, Baines JF, von Bismarck P. | Arthritis Res Ther | 10.1186/s13075-021-02711-8 | 2022 | |
| Metabolism | Unconventional N-Linked Glycosylation Promotes Trimeric Autotransporter Function in Kingella kingae and Aggregatibacter aphrophilus. | Rempe KA, Spruce LA, Porsch EA, Seeholzer SH, Norskov-Lauritsen N, St Geme JW. | mBio | 10.1128/mbio.01206-15 | 2015 | |
| Newly identified pathogens in periodontitis: evidence from an association and an elimination study. | Veras EL, Castro Dos Santos N, Souza JGS, Figueiredo LC, Retamal-Valdes B, Barao VAR, Shibli J, Bertolini M, Faveri M, Teles F, Duarte P, Feres M. | J Oral Microbiol | 10.1080/20002297.2023.2213111 | 2023 | ||
| Enzymology | Cervical spondylodiscitis with spinal epidural abscess caused by Aggregatibacter aphrophilus. | Pasqualini L, Mencacci A, Scarponi AM, Leli C, Fabbriciani G, Callarelli L, Schillaci G, Bistoni F, Mannarino E. | J Med Microbiol | 10.1099/jmm.0.47614-0 | 2008 | |
| Lumbar septic arthritis and psoas abscess due to Aggregatibacter aphrophilus. | Bernard F, Rossi P, Lagier JC, Craighero F, Frances Y, Granel B. | BMJ Case Rep | 10.1136/bcr.08.2010.3215 | 2011 | ||
| Aggregatibacter aphrophilus in a patient with recurrent empyema: a case report. | Ratnayake L, Olver WJ, Fardon T. | J Med Case Rep | 10.1186/1752-1947-5-448 | 2011 | ||
| Pathogenicity | Influence of Oral Microbiota on the Presence of IgA Anti-Citrullinated Protein Antibodies in Gingival Crevicular Fluid. | de Smit MJ, Rahajoe PS, Raveling-Eelsing E, Lisotto P, Harmsen HJM, Kertia N, Vissink A, Westra J. | Front Oral Health | 10.3389/froh.2022.904711 | 2022 | |
| Phylogeny | Accurate identification of fastidious Gram-negative rods: integration of both conventional phenotypic methods and 16S rRNA gene analysis. | de Melo Oliveira MG, Abels S, Zbinden R, Bloemberg GV, Zbinden A. | BMC Microbiol | 10.1186/1471-2180-13-162 | 2013 | |
| Proteomic analysis of sialoliths from calcified, lipid and mixed groups as a source of potential biomarkers of deposit formation in the salivary glands. | Musial N, Bogucka A, Tretiakow D, Skorek A, Ryl J, Czaplewska P. | Clin Proteomics | 10.1186/s12014-023-09402-3 | 2023 | ||
| Dual function of the O-antigen WaaL ligase of Aggregatibacter actinomycetemcomitans. | Danforth DR, Melloni M, Thorpe R, Cohen A, Voogt R, Tristano J, Mintz KP. | Mol Oral Microbiol | 10.1111/omi.12444 | 2023 | ||
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| Short-term exposure to particulate matters is associated with septic emboli in infective endocarditis. | Hsieh FC, Huang CY, Lin SF, Sun JT, Yen TH, Chang CC. | Medicine (Baltimore) | 10.1097/md.0000000000017899 | 2019 | ||
| Pathogenicity | Systematic Evaluation of the Viable Microbiome in the Human Oral and Gut Samples with Spike-in Gram+/- Bacteria. | Liu F, Lu H, Dong B, Huang X, Cheng H, Qu R, Hu Y, Zhong L, Guo Z, You Y, Xu ZZ. | mSystems | 10.1128/msystems.00738-22 | 2023 | |
| Impact of different oral treatments on the composition of the supragingival plaque microbiome. | Rabe A, Gesell Salazar M, Michalik S, Kocher T, Below H, Volker U, Welk A. | J Oral Microbiol | 10.1080/20002297.2022.2138251 | 2022 | ||
| Narrative review of application of metagenomic approaches to study the link between oropharyngeal microbiome and infectious diseases. | Diallo K, Missa KF, Tuo JK, Amoikon TLS, Bla BK, Bonfoh B. | Front Microbiol | 10.3389/fmicb.2023.1292526 | 2023 | ||
| Kingella kingae endocarditis: A rare case of mitral valve perforation. | Holmes AA, Hung T, Human DG, Campbell AI. | Ann Pediatr Cardiol | 10.4103/0974-2069.84664 | 2011 | ||
| Appendiceal microbiome in uncomplicated and complicated acute appendicitis: A prospective cohort study. | Vanhatalo S, Munukka E, Kallonen T, Sippola S, Gronroos J, Haijanen J, Hakanen AJ, Salminen P. | PLoS One | 10.1371/journal.pone.0276007 | 2022 | ||
| The Role of Oral Microbiota in Intra-Oral Halitosis. | Hampelska K, Jaworska MM, Babalska ZL, Karpinski TM. | J Clin Med | 10.3390/jcm9082484 | 2020 | ||
| Whole Genome Sequencing of Aggregatibacter actinomycetemcomitans Cultured from Blood Stream Infections Reveals Three Major Phylogenetic Groups Including a Novel Lineage Expressing Serotype a Membrane O Polysaccharide. | Nedergaard S, Kobel CM, Nielsen MB, Moller RT, Jensen AB, Norskov-Lauritsen N. | Pathogens | 10.3390/pathogens8040256 | 2019 | ||
| Pyogenic ventriculitis complicating Aggregatibacter aphrophilus infective endocarditis: A case report and literature review. | Jung GW, Parkins MD, Church D. | Can J Infect Dis Med Microbiol | 10.1155/2009/971735 | 2009 | ||
| The Oral Microbiome in Periodontal Health. | Lenartova M, Tesinska B, Janatova T, Hrebicek O, Mysak J, Janata J, Najmanova L. | Front Cell Infect Microbiol | 10.3389/fcimb.2021.629723 | 2021 | ||
| Culture on Selective Media and Amplicon-Based Sequencing of 16S rRNA from Spontaneous Brain Abscess-the View from the Diagnostic Laboratory. | Andersen C, Bergholt B, Ridderberg W, Norskov-Lauritsen N. | Microbiol Spectr | 10.1128/spectrum.02407-21 | 2022 | ||
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| Corncob structures in dental plaque reveal microhabitat taxon specificity. | Morillo-Lopez V, Sjaarda A, Islam I, Borisy GG, Mark Welch JL. | Microbiome | 10.1186/s40168-022-01323-x | 2022 | ||
| Enzymology | Determinants and Interactions of Oral Bacterial and Fungal Microbiota in Healthy Chinese Adults. | Cheung MK, Chan JYK, Wong MCS, Wong PY, Lei P, Cai L, Lan L, Ho WCS, Yeung ACM, Chan PKS, Chen Z. | Microbiol Spectr | 10.1128/spectrum.02410-21 | 2022 | |
| Pathogenicity | Pro-inflammatory cytokines in cystic glioblastoma: A quantitative study with a comparison with bacterial brain abscesses. With an MRI investigation of displacement and destruction of the brain tissue surrounding a glioblastoma. | Hassel B, Hassel B, Niehusmann P, Halvorsen B, Dahlberg D. | Front Oncol | 10.3389/fonc.2022.846674 | 2022 | |
| Aggregatibacter actinomycetemcomitans osteomyelitis in a 12 year old boy: case report emphasizing the importance of tissue culture, and review of literature. | Sharma K, Mudgil P, Whitehall JS, Gosbell I. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-017-0186-0 | 2017 | ||
| Identification of HACEK clinical isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Couturier MR, Mehinovic E, Croft AC, Fisher MA. | J Clin Microbiol | 10.1128/jcm.01777-10 | 2011 | ||
| Phylogeny | Comparative Clinical Evaluation of NeoPlex RB-8 with Seeplex PneumoBacter ACE for Simultaneous Detection of Eight Respiratory Bacterial Pathogens. | Kim JW, Hong SS, Lee IS, Chi HY, Kim SO, Kim HN, Hong SP. | J Clin Microbiol | 10.1128/jcm.01500-19 | 2020 | |
| Phylogeny | Massive parallel sequencing provides new perspectives on bacterial brain abscesses. | Kommedal O, Wilhelmsen MT, Skrede S, Meisal R, Jakovljev A, Gaustad P, Hermansen NO, Vik-Mo E, Solheim O, Ambur OH, Saebo O, Hostmaelingen CT, Helland C. | J Clin Microbiol | 10.1128/jcm.00346-14 | 2014 | |
| CT-Guided Biopsy in Suspected Spondylodiscitis--The Association of Paravertebral Inflammation with Microbial Pathogen Detection. | Spira D, Germann T, Lehner B, Hemmer S, Akbar M, Jesser J, Weber MA, Rehnitz C. | PLoS One | 10.1371/journal.pone.0146399 | 2016 | ||
| Transcriptomic Analysis of Aggregatibacter actinomycetemcomitans Core and Accessory Genes in Different Growth Conditions. | Tjokro NO, Kittichotirat W, Torittu A, Ihalin R, Bumgarner RE, Chen C. | Pathogens | 10.3390/pathogens8040282 | 2019 | ||
| Genetics | When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing. | Lazarevic V, Gaia N, Girard M, Leo S, Cherkaoui A, Renzi G, Emonet S, Jamme S, Ruppe E, Vijgen S, Rubbia-Brandt L, Toso C, Schrenzel J. | Front Microbiol | 10.3389/fmicb.2018.01566 | 2018 | |
| Oral Microbiome Dysbiosis Is Associated With Symptoms Severity and Local Immune/Inflammatory Response in COVID-19 Patients: A Cross-Sectional Study. | Soffritti I, D'Accolti M, Fabbri C, Passaro A, Manfredini R, Zuliani G, Libanore M, Franchi M, Contini C, Caselli E. | Front Microbiol | 10.3389/fmicb.2021.687513 | 2021 | ||
| Clinical utility and cost-effectiveness of bacterial 16S rRNA and targeted PCR based diagnostic testing in a UK microbiology laboratory network. | Aggarwal D, Kanitkar T, Narouz M, Azadian BS, Moore LSP, Mughal N. | Sci Rep | 10.1038/s41598-020-64739-1 | 2020 | ||
| Pathogenicity | Effects of subgingival air-polishing with trehalose powder on oral biofilm during periodontal maintenance therapy: a randomized-controlled pilot study. | Kruse AB, Maamar R, Akakpo DL, Woelber JP, Wittmer A, Vach K, Ratka-Kruger P, Al-Ahmad A. | BMC Oral Health | 10.1186/s12903-020-01111-9 | 2020 | |
| Phylogeny | Nitric Oxide Donor Modulates a Multispecies Oral Bacterial Community-An In Vitro Study. | Nambu T, Wang D, Mashimo C, Maruyama H, Kashiwagi K, Yoshikawa K, Yamamoto K, Okinaga T. | Microorganisms | 10.3390/microorganisms7090353 | 2019 | |
| Genetics | Diversity of 5S rRNA genes within individual prokaryotic genomes. | Pei A, Li H, Oberdorf WE, Alekseyenko AV, Parsons T, Yang L, Gerz EA, Lee P, Xiang C, Nossa CW, Pei Z. | FEMS Microbiol Lett | 10.1111/j.1574-6968.2012.02632.x | 2012 | |
| Osteoarticular Infection in Three Young Thoroughbred Horses Caused by a Novel Gram Negative Cocco-Bacillus. | Hudson BJ, Chicken C, Blishen A, Todhunter KH, Begg AP, Chan L, Karagiannis T, Raymond B, Bogema D, Adkins AR, O'Sullivan CB, O'Rourke BA, Roy Chowdhury P, Djordjevic SP, Charles IG, Edgar A, Mitsakos K. | Case Rep Vet Med | 10.1155/2020/9785861 | 2020 | ||
| Genetics | Prediction of Prophages and Their Host Ranges in Pathogenic and Commensal Neisseria Species. | Orazi G, Collins AJ, Whitaker RJ. | mSystems | 10.1128/msystems.00083-22 | 2022 | |
| Enzymology | Francisella philomiragia Bacteremia in a Patient with Acute Respiratory Insufficiency and Acute-on-Chronic Kidney Disease. | Relich RF, Humphries RM, Mattison HR, Miles JE, Simpson ER, Corbett IJ, Schmitt BH, May M. | J Clin Microbiol | 10.1128/jcm.01762-15 | 2015 | |
| Metabolism | Semiprocessive Hyperglycosylation of Adhesin by Bacterial Protein N-Glycosyltransferases. | Yakovlieva L, Ramirez-Palacios C, Marrink SJ, Walvoort MTC. | ACS Chem Biol | 10.1021/acschembio.0c00848 | 2021 | |
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| Salivary dysbiosis in Sjögren's syndrome and a commensal-mediated immunomodulatory effect of salivary gland epithelial cells. | Tseng YC, Yang HY, Lin WT, Chang CB, Chien HC, Wang HP, Chen CM, Wang JT, Li C, Wu SF, Hsieh SC. | NPJ Biofilms Microbiomes | 10.1038/s41522-021-00192-w | 2021 | ||
| Substantial Differences in the Subgingival Microbiome Measured by 16S Metagenomics According to Periodontitis Status in Older Women. | LaMonte MJ, Genco RJ, Zheng W, McSkimming DI, Andrews CA, Hovey KM, Li L, Sun Y, Buck MJ, Millen AE, Falkner KL, Wactawski-Wende J. | Dent J (Basel) | 10.3390/dj6040058 | 2018 | ||
| Metabolism | Identification and Characterization of a Novel N- and O-Glycosyltransferase from Saccharopolyspora erythraea. | Gutacker F, Schmidt-Bohli YI, Strobel T, Qiu D, Jessen H, Paululat T, Bechthold A. | Molecules | 10.3390/molecules25153400 | 2020 | |
| Functional dysbiosis within dental plaque microbiota in cleft lip and palate patients. | Funahashi K, Shiba T, Watanabe T, Muramoto K, Takeuchi Y, Ogawa T, Izumi Y, Sekizaki T, Nakagawa I, Moriyama K. | Prog Orthod | 10.1186/s40510-019-0265-1 | 2019 | ||
| Proteome | Salivary proteome of aphthous stomatitis reveals the participation of vitamin metabolism, nutrients, and bacteria. | Hernandez-Olivos R, Munoz M, Nunez E, Camargo-Ayala PA, Garcia-Huidobro J, Pereira A, Nachtigall FM, Santos LS, Rivera C. | Sci Rep | 10.1038/s41598-021-95228-8 | 2021 | |
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| A riboswitch separated from its ribosome-binding site still regulates translation. | Schroeder GM, Akinyemi O, Malik J, Focht CM, Pritchett EM, Baker CD, McSally JP, Jenkins JL, Mathews DH, Wedekind JE. | Nucleic Acids Res | 10.1093/nar/gkad056 | 2023 | ||
| Sputum microbiota in tuberculosis as revealed by 16S rRNA pyrosequencing. | Cheung MK, Lam WY, Fung WY, Law PT, Au CH, Nong W, Kam KM, Kwan HS, Tsui SK. | PLoS One | 10.1371/journal.pone.0054574 | 2013 | ||
| Blood cultures in acute surgical admissions. | Dunne DF, McDonald R, Ratnayake R, Malik HZ, Ward R, Poston GJ, Fenwick SW. | Ann R Coll Surg Engl | 10.1308/003588414x14055925059110 | 2015 | ||
| Accuracy of commercial kits and published primer pairs for the detection of periodontopathogens. | Santigli E, Leitner E, Wimmer G, Kessler HH, Feierl G, Grube M, Eberhard K, Klug B. | Clin Oral Investig | 10.1007/s00784-016-1748-9 | 2016 | ||
| Metabolism | Processivity in Bacterial Glycosyltransferases. | Yakovlieva L, Walvoort MTC. | ACS Chem Biol | 10.1021/acschembio.9b00619 | 2020 | |
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| Enzymology | Development of Real-Time PCR Methods for the Detection of Bacterial Meningitis Pathogens without DNA Extraction. | Vuong J, Collard JM, Whaley MJ, Bassira I, Seidou I, Diarra S, Ouedraogo RT, Kambire D, Taylor TH, Sacchi C, Mayer LW, Wang X. | PLoS One | 10.1371/journal.pone.0147765 | 2016 | |
| Enzymology | Characterization of polybacterial clinical samples using a set of group-specific broad-range primers targeting the 16S rRNA gene followed by DNA sequencing and RipSeq analysis. | Kommedal O, Lekang K, Langeland N, Wiker HG. | J Med Microbiol | 10.1099/jmm.0.028373-0 | 2011 | |
| Actinomyces and related organisms in human infections. | Kononen E, Wade WG. | Clin Microbiol Rev | 10.1128/cmr.00100-14 | 2015 | ||
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| Cytoplasmic glycoengineering of Apx toxin fragments in the development of Actinobacillus pleuropneumoniae glycoconjugate vaccines. | Passmore IJ, Andrejeva A, Wren BW, Cuccui J. | BMC Vet Res | 10.1186/s12917-018-1751-2 | 2019 | ||
| Microbial Protein Binding to gC1qR Drives PLA2G1B-Induced CD4 T-Cell Anergy. | Pothlichet J, Meola A, Bugault F, Jeammet L, Savitt AG, Ghebrehiwet B, Touqui L, Pouletty P, Fiore F, Sauvanet A, Theze J. | Front Immunol | 10.3389/fimmu.2022.824746 | 2022 | ||
| Advantages and Limitations of Direct PCR Amplification of Bacterial 16S-rDNA from Resected Heart Tissue or Swabs Followed by Direct Sequencing for Diagnosing Infective Endocarditis: A Retrospective Analysis in the Routine Clinical Setting. | Maneg D, Sponsel J, Muller I, Lohr B, Penders J, Madlener K, Hunfeld KP. | Biomed Res Int | 10.1155/2016/7923874 | 2016 | ||
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| Enzymology | Prosthetic valve endocarditis and bloodstream infection due to Mycobacterium chimaera. | Achermann Y, Rossle M, Hoffmann M, Deggim V, Kuster S, Zimmermann DR, Bloemberg G, Hombach M, Hasse B. | J Clin Microbiol | 10.1128/jcm.00435-13 | 2013 | |
| Genetics | Panel 3: Genomics, precision medicine and targeted therapies. | Santos-Cortez RLP, Bhutta MF, Earl JP, Hafren L, Jennings M, Mell JC, Pichichero ME, Ryan AF, Tateossian H, Ehrlich GD. | Int J Pediatr Otorhinolaryngol | 10.1016/j.ijporl.2019.109835 | 2020 | |
| Aggregatibacter actinomycetemcomitans H-NS promotes biofilm formation and alters protein dynamics of other species within a polymicrobial oral biofilm. | Bao K, Bostanci N, Thurnheer T, Grossmann J, Wolski WE, Thay B, Belibasakis GN, Oscarsson J. | NPJ Biofilms Microbiomes | 10.1038/s41522-018-0055-4 | 2018 | ||
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| Phylogeny | Investigations into genome diversity of Haemophilus influenzae using whole genome sequencing of clinical isolates and laboratory transformants. | Power PM, Bentley SD, Parkhill J, Moxon ER, Hood DW. | BMC Microbiol | 10.1186/1471-2180-12-273 | 2012 | |
| Profiling of Oral Microbiota in Early Childhood Caries Using Single-Molecule Real-Time Sequencing. | Wang Y, Zhang J, Chen X, Jiang W, Wang S, Xu L, Tu Y, Zheng P, Wang Y, Lin X, Chen H. | Front Microbiol | 10.3389/fmicb.2017.02244 | 2017 | ||
| Phylogeny | Rapid identification and phylogenetic classification of diverse bacterial pathogens in a multiplexed hybridization assay targeting ribosomal RNA. | Bhattacharyya RP, Walker M, Boykin R, Son SS, Liu J, Hachey AC, Ma P, Wu L, Choi K, Cummins KC, Benson M, Skerry J, Ryu H, Wong SY, Goldberg MB, Han J, Pierce VM, Cosimi LA, Shoresh N, Livny J, Beechem J, Hung DT. | Sci Rep | 10.1038/s41598-019-40792-3 | 2019 | |
| O-Polysaccharide Plays a Major Role on the Virulence and Immunostimulatory Potential of Aggregatibacter actinomycetemcomitans During Periodontal Infection. | Monasterio G, Castillo F, Astorga J, Hoare A, Terraza-Aguirre C, Cafferata EA, Villablanca EJ, Vernal R. | Front Immunol | 10.3389/fimmu.2020.591240 | 2020 | ||
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| Enzymology | Modulation of the processive abasic site lyase activity of a pyrimidine dimer glycosylase. | Ryabinina OP, Minko IG, Lasarev MR, McCullough AK, Lloyd RS. | DNA Repair (Amst) | 10.1016/j.dnarep.2011.07.015 | 2011 | |
| Genetics | Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and Transposon Mutagenesis in a Murine Subcutaneous Abscess Model. | Hasegawa N, Sekizuka T, Sugi Y, Kawakami N, Ogasawara Y, Kato K, Yamashita A, Takeuchi F, Kuroda M. | Infect Immun | 10.1128/iai.00886-16 | 2017 | |
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| Mature Biofilm Degradation by Potential Probiotics: Aggregatibacter actinomycetemcomitans versus Lactobacillus spp. | Jaffar N, Ishikawa Y, Mizuno K, Okinaga T, Maeda T. | PLoS One | 10.1371/journal.pone.0159466 | 2016 | ||
| A computational strategy for the search of regulatory small RNAs in Actinobacillus pleuropneumoniae. | Rossi CC, Bosse JT, Li Y, Witney AA, Gould KA, Langford PR, Bazzolli DM. | RNA | 10.1261/rna.055129.115 | 2016 | ||
| The rtxA toxin gene of Kingella kingae: a pertinent target for molecular diagnosis of osteoarticular infections. | Lehours P, Freydiere AM, Richer O, Burucoa C, Boisset S, Lanotte P, Prere MF, Ferroni A, Lafuente C, Vandenesch F, Megraud F, Menard A. | J Clin Microbiol | 10.1128/jcm.01657-10 | 2011 | ||
| Phylogeny | Fastidious Gram-Negatives: Identification by the Vitek 2 Neisseria-Haemophilus Card and by Partial 16S rRNA Gene Sequencing Analysis. | Sonksen UW, Christensen JJ, Nielsen L, Hesselbjerg A, Hansen DS, Bruun B. | Open Microbiol J | 10.2174/1874285801004010123 | 2010 | |
| The N-linking glycosylation system from Actinobacillus pleuropneumoniae is required for adhesion and has potential use in glycoengineering. | Cuccui J, Terra VS, Bosse JT, Naegeli A, Abouelhadid S, Li Y, Lin CW, Vohra P, Tucker AW, Rycroft AN, Maskell DJ, Aebi M, Langford PR, Wren BW, BRaDP1T Consortium. | Open Biol | 10.1098/rsob.160212 | 2017 | ||
| Phylogeny | Diversity and site-specificity of the oral microflora in the elderly. | Preza D, Olsen I, Willumsen T, Grinde B, Paster BJ. | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-009-0743-3 | 2009 | |
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| Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans. | Huang Y, Kittichotirat W, Mayer MP, Hall R, Bumgarner R, Chen C. | Mol Oral Microbiol | 10.1111/omi.12005 | 2013 | ||
| Biotechnology | Sequence analysis of Leuconostoc mesenteroides bacteriophage Phi1-A4 isolated from an industrial vegetable fermentation. | Lu Z, Altermann E, Breidt F, Kozyavkin S. | Appl Environ Microbiol | 10.1128/aem.02126-09 | 2010 | |
| Metabolism | Characterization of the Haemophilus influenzae tehB gene and its role in virulence. | Whitby PW, Seale TW, Morton DJ, VanWagoner TM, Stull TL. | Microbiology (Reading) | 10.1099/mic.0.036400-0 | 2010 | |
| Oligo-DNA custom macroarray for monitoring major pathogenic and non-pathogenic fungi and bacteria in the phyllosphere of apple trees. | He YH, Isono S, Shibuya M, Tsuji M, Adkar Purushothama CR, Tanaka K, Sano T. | PLoS One | 10.1371/journal.pone.0034249 | 2012 | ||
| Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation. | E-komon T, Burchmore R, Herzyk P, Davies R. | BMC Bioinformatics | 10.1186/1471-2105-13-63 | 2012 | ||
| Metabolism | Haemophilus parainfluenzae expresses diverse lipopolysaccharide O-antigens using ABC transporter and Wzy polymerase-dependent mechanisms. | Young RE, Twelkmeyer B, Vitiazeva V, Power PM, Schweda EK, Hood DW. | Int J Med Microbiol | 10.1016/j.ijmm.2013.08.006 | 2013 | |
| Metabolism | A genomic perspective on the potential of Actinobacillus succinogenes for industrial succinate production. | McKinlay JB, Laivenieks M, Schindler BD, McKinlay AA, Siddaramappa S, Challacombe JF, Lowry SR, Clum A, Lapidus AL, Burkhart KB, Harkins V, Vieille C. | BMC Genomics | 10.1186/1471-2164-11-680 | 2010 | |
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| Phylogeny | Reclassification of Actinobacillus actinomycetemcomitans, Haemophilus aphrophilus, Haemophilus paraphrophilus and Haemophilus segnis as Aggregatibacter actinomycetemcomitans gen. nov., comb. nov., Aggregatibacter aphrophilus comb. nov. and Aggregatibacter segnis comb. nov., and emended description of Aggregatibacter aphrophilus to include V factor-dependent and V factor-independent isolates. | Norskov-Lauritsen N, Kilian M | Int J Syst Evol Microbiol | 10.1099/ijs.0.64207-0 | 2006 | |
| Phylogeny | Differentiation among closely related organisms of the Actinobacillus-Haemophilus-Pasteurella group by means of lysozyme and EDTA. | Olsen I, Brondz I | J Clin Microbiol | 10.1128/jcm.22.4.629-636.1985 | 1985 | |
| Pathogenicity | Use of a nonradioactive genetic probe identified, synthesized, and labeled in the polymerase chain reaction. | Preus HR, Russell DT | Scand J Dent Res | 10.1111/j.1600-0722.1994.tb01173.x | 1994 | |
| Phylogeny | Whole-Genome Sequencing of Aggregatibacter Species Isolated from Human Clinical Specimens and Description of Aggregatibacter kilianii sp. nov. | Murra M, Lutzen L, Barut A, Zbinden R, Lund M, Villesen P, Norskov-Lauritsen N. | J Clin Microbiol | 10.1128/jcm.00053-18 | 2018 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #35024 | Collection of Institut Pasteur ; Curators of the CIP; CIP 70.73 |
| #44685 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 3715 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68381 | Automatically annotated from API rID32STR . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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