Listeria innocua (CIP 107775, CRBIP13.24, CLIP 11262)

Name: Listeria innocua (CIP 107775, CRBIP13.24, CLIP 11262)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 135472

Type strain

Culture col. no. CIP 107775 CRBIP13.24 CLIP 11262

NCBI tax ID(s) 1642

Special Collections CIP

History CIP <- 2002, C. Buchrieser, Inst. Pasteur, Paris, France <- P. Martin, Inst. Pasteur, Paris, France: strain CLIP 11262 <- Rabat, Maroc

Links

Listeria innocua CIP 107775 is a facultative anaerobe, mesophilic, Gram-positive prokaryote of the family Listeriaceae.

Gram-positive rod-shaped facultative anaerobe mesophilic

Name and taxonomic classification

SI-ID 362098

CIP 107775,CRBIP13.23,CRBIP 13.24

@ref 20215

Last LPSN update 2026-02-09 11:32:26

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Listeriaceae

Genus Listeria

Species Listeria innocua

Full scientific name Listeria innocua (ex Seeliger and Schoofs 1979) Seeliger 1983

BacDive ID	Other strains from **Listeria innocua** (30)	Type strain
6871	L. innocua 58, DSM 20649, ATCC 33090, NCTC 11288, WDCM ... (type strain)
135786	L. innocua CIP 78.44
136475	L. innocua L92/67, CIP 106065, SLCC 4951, NCTC 10528, ...
136614	L. innocua CIP 80.12, ATCC 33091, NCTC 11289
137599	L. innocua CIP 79.45
143407	L. innocua CCUG 18949
143915	L. innocua CCUG 21830
143916	L. innocua CCUG 21831
143985	L. innocua CCUG 22268
143986	L. innocua CCUG 22269
143987	L. innocua CCUG 22270
144412	L. innocua CCUG 24924
144413	L. innocua CCUG 24925
144414	L. innocua CCUG 24926
144415	L. innocua CCUG 24927
144416	L. innocua CCUG 24928
145079	L. innocua CCUG 27612
148538	L. innocua CCUG 35613, ATCC 51742
151644	L. innocua CCUG 44511
151763	L. innocua CCUG 44813
172963	L. innocua CRBIP13.10, CLIP 10, CLIP 92006
172964	L. innocua CRBIP13.11, CLIP 11, CLIP 91918
172965	L. innocua CRBIP13.12, CLIP 12, CLIP 91879
172966	L. innocua CRBIP13.13, CLIP 91549
172967	L. innocua R1., CRBIP13.14, CLIP 86490
172968	L. innocua CRBIP13.7, CLIP 7, CLIP 88566
172969	L. innocua CPC CLIP 88307, CRBIP13.8, CLIP 8, CLIP 88307
172970	L. innocua CRBIP13.9, CLIP 92971
174499	L. innocua J1-023, DSM 110665
174500	L. innocua PRL/NW 15B95, DSM 110666

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
34597	positive	rod-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
34597	MEDIUM 29- Brain heart agar	Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g)
34597	CIP Medium 29		Medium recipe at CIP
34597	CIP Medium 72		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
34597	positive	growth	37	mesophilic
34597	positive	growth	10-45
34597	negative	growth	5

Physiology and metabolism

Oxygen tolerance

34597

Oxygen tolerancefacultative anaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68376	18333 ChEBI	D-arabitol	+	builds acid from	from API LIST
68371	18333 ChEBI	D-arabitol	+	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68376	16988 ChEBI	D-ribose	-	builds acid from	from API LIST
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68376	16443 ChEBI	D-tagatose	-	builds acid from	from API LIST
68376	65327 ChEBI	D-xylose	-	builds acid from	from API LIST
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68376	4853 ChEBI	esculin	+	hydrolysis	from API LIST
34597	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68376	29042 ChEBI	glucose 1-phosphate	-	builds acid from	from API LIST
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68376	62345 ChEBI	L-rhamnose	-	builds acid from	from API LIST
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68376	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API LIST
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
34597	17632 ChEBI	nitrate	-	reduction
34597	17632 ChEBI	nitrate	+	respiration
34597	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	+	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
34597	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
34597	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
34597	15688 ChEBI	acetoin	+
34597	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
34597	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68376	alpha-mannosidase	+	3.2.1.24	from API LIST
68382	beta-galactosidase	-	3.2.1.23	from API zym
34597	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68376	beta-glucosidase	+	3.2.1.21	from API LIST
68382	beta-glucuronidase	-	3.2.1.31	from API zym
34597	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
34597	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
34597	ornithine decarboxylase	-	4.1.1.17
34597	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
34597	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
34597	-	+	+	+	-	+	-	-	-	+	+	+	-	-	-	+	+	+	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
34597	not determinedn.d.	+	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	+	+	+	+	+	+	+	+	+	+	-	-	+	-	-	-	+	-	+	+	-	-	-	-	-	+	-	-	-	-

API LIST

@ref	Differentiation L. innocura(+)/ L.monoytogenes(-)DIM	ESC	alpha MAN	DARL	XYL	RHA	Acid from methyl-alpha-D-glucopyranosideMDG	RIB	G1P	TAG	beta hemolysis presentbeta HEM
34597	+	+	+	+	-	-	+	-	-	-	not determinedn.d.

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
34597	not determinedn.d.	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
34597		Rabat	Morocco	MAR	Africa
34597	Food, Cheese	Rabat	Morocco	MAR	Africa	1988

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
34597	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Long-chain unsaturated free fatty acids reduce the host cell invasion of Listeria monocytogenes outbreak strains.	Borreby C, Hvidtfeldt TA, Jespersen MG, T Dos Santos P, Houborg SD, Lillebaek EMS, Kemp M, Kallipolitis BH.	Front Cell Infect Microbiol	10.3389/fcimb.2025.1542165	2025
Genetics	New Insight into Antimicrobial Compounds from Food and Marine-Sourced Carnobacterium Species through Phenotype and Genome Analyses.	Begrem S, Ivaniuk F, Gigout-Chevalier F, Kolypczuk L, Bonnetot S, Leroi F, Grovel O, Delbarre-Ladrat C, Passerini D.	Microorganisms	10.3390/microorganisms8071093	2020
Genetics	Tetracycline resistance in Listeria monocytogenes and L. innocua from wild black bears (Ursus americanus) in the United States is mediated by novel transposable elements.	Brown P, Hernandez K, Parsons C, Chen Y, Gould N, DePerno CS, Niedermeyer J, Kathariou S.	Appl Environ Microbiol	10.1128/aem.01205-23	2023
	Identification of Listeria species and Multilocus Variable-Number Tandem Repeat Analysis (MLVA) Typing of Listeria innocua and Listeria monocytogenes Isolates from Cattle Farms and Beef and Beef-Based Products from Retail Outlets in Mpumalanga and North West Provinces, South Africa.	Manqele A, Gcebe N, Pierneef RE, Moerane R, Adesiyun AA.	Pathogens	10.3390/pathogens12010147	2023
	A dual-function phage regulator controls the response of cohabiting phage elements via regulation of the bacterial SOS response.	Azulay G, Pasechnek A, Stadnyuk O, Ran-Sapir S, Fleisacher AM, Borovok I, Sigal N, Herskovits AA.	Cell Rep	10.1016/j.celrep.2022.110723	2022
	Heavy Metal Resistance Determinants of the Foodborne Pathogen Listeria monocytogenes.	Parsons C, Lee S, Kathariou S.	Genes (Basel)	10.3390/genes10010011	2018
	Structure of a RecT/Redbeta family recombinase in complex with a duplex intermediate of DNA annealing.	Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE.	Nat Commun	10.1038/s41467-022-35572-z	2022
Enzymology	Crystallization and preliminary X-ray diffraction analysis of Lin1840, a putative beta-glucosidase from Listeria innocua.	Nakajima M, Yoshida R, Miyanaga A, Taguchi H.	Acta Crystallogr F Struct Biol Commun	10.1107/s2053230x14018597	2014
	The role of the Listeria monocytogenes surfactome in biofilm formation.	Janez N, Skrlj B, Sternisa M, Klancnik A, Sabotic J.	Microb Biotechnol	10.1111/1751-7915.13847	2021
Metabolism	Characterization, amyloid formation, and immobilization of a novel SGNH hydrolase from Listeria innocua 11262.	Kim S, Bae SY, Kim SJ, Ngo TD, Kim KK, Kim TD.	Int J Biol Macromol	10.1016/j.ijbiomac.2011.10.003	2012
	Design of a novel affinity probe using the cell wall-binding domain of a Listeria monocytogenes autolysin for pathogen detection.	Lin M, Dan H.	Microbiol Spectr	10.1128/spectrum.05356-22	2023
Metabolism	A novel bipartite antitermination system widespread in conjugative elements of Gram-positive bacteria.	Miguel-Arribas A, Val-Calvo J, Gago-Cordoba C, Izquierdo JM, Abia D, Wu LJ, Errington J, Meijer WJJ.	Nucleic Acids Res	10.1093/nar/gkab360	2021
	Stress survival islet 1 (SSI-1) survey in Listeria monocytogenes reveals an insert common to listeria innocua in sequence type 121 L. monocytogenes strains.	Hein I, Klinger S, Dooms M, Flekna G, Stessl B, Leclercq A, Hill C, Allerberger F, Wagner M.	Appl Environ Microbiol	10.1128/aem.02159-10	2011
	Development of new multilocus variable number of tandem repeat analysis (MLVA) for Listeria innocua and its application in a food processing plant.	Takahashi H, Ohshima C, Nakagawa M, Thanatsang K, Phraephaisarn C, Chaturongkasumrit Y, Keeratipibul S, Kuda T, Kimura B.	PLoS One	10.1371/journal.pone.0105803	2014
	Genome analysis of deep-sea thermophilic phage D6E.	Wang Y, Zhang X.	Appl Environ Microbiol	10.1128/aem.01270-10	2010
Enzymology	1,2-beta-Oligoglucan phosphorylase from Listeria innocua.	Nakajima M, Toyoizumi H, Abe K, Nakai H, Taguchi H, Kitaoka M.	PLoS One	10.1371/journal.pone.0092353	2014
Enzymology	Substrate specificity characterization for eight putative nudix hydrolases. Evaluation of criteria for substrate identification within the Nudix family.	Nguyen VN, Park A, Xu A, Srouji JR, Brenner SE, Kirsch JF.	Proteins	10.1002/prot.25163	2016
Metabolism	Structural and functional insights into the bona fide catalytic state of Streptococcus pyogenes Cas9 HNH nuclease domain.	Zuo Z, Zolekar A, Babu K, Lin VJ, Hayatshahi HS, Rajan R, Wang YC, Liu J.	Elife	10.7554/elife.46500	2019
Metabolism	Novel listerial glycerol dehydrogenase- and phosphoenolpyruvate-dependent dihydroxyacetone kinase system connected to the pentose phosphate pathway.	Monniot C, Zebre AC, Ake FM, Deutscher J, Milohanic E.	J Bacteriol	10.1128/jb.00801-12	2012
Metabolism	Metabolism of the Gram-Positive Bacterial Pathogen Listeria monocytogenes.	Sauer JD, Herskovits AA, O'Riordan MXD.	Microbiol Spectr	10.1128/microbiolspec.gpp3-0066-2019	2019
	Identification of Listeria innocua by PCR targeting a putative transcriptional regulator gene.	Liu D, Ainsworth AJ, Austin FW, Lawrence ML.	FEMS Microbiol Lett	10.1016/s0378-1097(03)00378-1	2003
Genetics	Genome comparison of Listeria monocytogenes serotype 4a strain HCC23 with selected lineage I and lineage II L. monocytogenes strains and other Listeria strains.	Paul D, Steele C, Donaldson JR, Banes MM, Kumar R, Bridges SM, Arick M, Lawrence ML.	Genom Data	10.1016/j.gdata.2014.06.010	2014
	Comparative analysis of the sigma B-dependent stress responses in Listeria monocytogenes and Listeria innocua strains exposed to selected stress conditions.	Raengpradub S, Wiedmann M, Boor KJ.	Appl Environ Microbiol	10.1128/aem.00951-07	2008
Enzymology	Novel activator of mannose-specific phosphotransferase system permease expression in Listeria innocua, identified by screening for pediocin AcH resistance.	Xue J, Hunter I, Steinmetz T, Peters A, Ray B, Miller KW.	Appl Environ Microbiol	10.1128/aem.71.3.1283-1290.2005	2005
	Cell-Based Screen Identifies Human Interferon-Stimulated Regulators of Listeria monocytogenes Infection.	Perelman SS, Abrams ME, Eitson JL, Chen D, Jimenez A, Mettlen M, Schoggins JW, Alto NM.	PLoS Pathog	10.1371/journal.ppat.1006102	2016
Metabolism	Chitin hydrolysis by Listeria spp., including L. monocytogenes.	Leisner JJ, Larsen MH, Jorgensen RL, Brondsted L, Thomsen LE, Ingmer H.	Appl Environ Microbiol	10.1128/aem.02701-07	2008
	Epistatic control of intrinsic resistance by virulence genes in Listeria.	Scortti M, Han L, Alvarez S, Leclercq A, Moura A, Lecuit M, Vazquez-Boland J.	PLoS Genet	10.1371/journal.pgen.1007525	2018
Genetics	New aspects regarding evolution and virulence of Listeria monocytogenes revealed by comparative genomics and DNA arrays.	Doumith M, Cazalet C, Simoes N, Frangeul L, Jacquet C, Kunst F, Martin P, Cossart P, Glaser P, Buchrieser C.	Infect Immun	10.1128/iai.72.2.1072-1083.2004	2004
Metabolism	Wall teichoic acids restrict access of bacteriophage endolysin Ply118, Ply511, and PlyP40 cell wall binding domains to the Listeria monocytogenes peptidoglycan.	Eugster MR, Loessner MJ.	J Bacteriol	10.1128/jb.00808-12	2012
Genetics	Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species.	Nelson KE, Fouts DE, Mongodin EF, Ravel J, DeBoy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR, Paulsen IT, Peterson J, White O, Nelson WC, Nierman W, Beanan MJ, Brinkac LM, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Haft DH, Selengut J, Van Aken S, Khouri H, Fedorova N, Forberger H, Tran B, Kathariou S, Wonderling LD, Uhlich GA, Bayles DO, Luchansky JB, Fraser CM.	Nucleic Acids Res	10.1093/nar/gkh562	2004
Metabolism	Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease.	Anders C, Niewoehner O, Duerst A, Jinek M.	Nature	10.1038/nature13579	2014
	JProGO: a novel tool for the functional interpretation of prokaryotic microarray data using Gene Ontology information.	Scheer M, Klawonn F, Munch R, Grote A, Hiller K, Choi C, Koch I, Schobert M, Hartig E, Klages U, Jahn D.	Nucleic Acids Res	10.1093/nar/gkl329	2006
Metabolism	Regulation of the mpt operon in Listeria innocua by the ManR protein.	Xue J, Miller KW.	Appl Environ Microbiol	10.1128/aem.00052-07	2007
	Listeria monocytogenes Induces a Virulence-Dependent microRNA Signature That Regulates the Immune Response in Galleria mellonella.	Mannala GK, Izar B, Rupp O, Schultze T, Goesmann A, Chakraborty T, Hain T.	Front Microbiol	10.3389/fmicb.2017.02463	2017
	The htrA (degP) gene of Listeria monocytogenes 10403S is essential for optimal growth under stress conditions.	Wonderling LD, Wilkinson BJ, Bayles DO.	Appl Environ Microbiol	10.1128/aem.70.4.1935-1943.2004	2004
	Mosaic-like sequences containing transposon, phage, and plasmid elements among Listeria monocytogenes plasmids.	Canchaya C, Giubellini V, Ventura M, de los Reyes-Gavilan CG, Margolles A.	Appl Environ Microbiol	10.1128/aem.02799-09	2010
	Galleria mellonella-intracellular bacteria pathogen infection models: the ins and outs.	Asai M, Li Y, Newton SM, Robertson BD, Langford PR.	FEMS Microbiol Rev	10.1093/femsre/fuad011	2023
Transcriptome	Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes.	Hain T, Steinweg C, Kuenne CT, Billion A, Ghai R, Chatterjee SS, Domann E, Karst U, Goesmann A, Bekel T, Bartels D, Kaiser O, Meyer F, Puhler A, Weisshaar B, Wehland J, Liang C, Dandekar T, Lampidis R, Kreft J, Goebel W, Chakraborty T.	J Bacteriol	10.1128/jb.00758-06	2006
	A conserved anti-repressor controls horizontal gene transfer by proteolysis.	Bose B, Auchtung JM, Lee CA, Grossman AD.	Mol Microbiol	10.1111/j.1365-2958.2008.06414.x	2008
Phylogeny	The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes.	Ruepp A, Zollner A, Maier D, Albermann K, Hani J, Mokrejs M, Tetko I, Guldener U, Mannhaupt G, Munsterkotter M, Mewes HW.	Nucleic Acids Res	10.1093/nar/gkh894	2004
Metabolism	Analysis of the isoprenoid biosynthesis pathways in Listeria monocytogenes reveals a role for the alternative 2-C-methyl-D-erythritol 4-phosphate pathway in murine infection.	Begley M, Bron PA, Heuston S, Casey PG, Englert N, Wiesner J, Jomaa H, Gahan CG, Hill C.	Infect Immun	10.1128/iai.01376-07	2008
	Assessing the quality of whole genome alignments in bacteria.	Swidan F, Shamir R.	Adv Bioinformatics	10.1155/2009/749027	2009
Metabolism	Pyruvate carboxylase plays a crucial role in carbon metabolism of extra- and intracellularly replicating Listeria monocytogenes.	Schar J, Stoll R, Schauer K, Loeffler DI, Eylert E, Joseph B, Eisenreich W, Fuchs TM, Goebel W.	J Bacteriol	10.1128/jb.01132-09	2010
Metabolism	Identification and analysis of DNA-binding transcription factors in Bacillus subtilis and other Firmicutes--a genomic approach.	Moreno-Campuzano S, Janga SC, Perez-Rueda E.	BMC Genomics	10.1186/1471-2164-7-147	2006
Genetics	inGeno--an integrated genome and ortholog viewer for improved genome to genome comparisons.	Liang C, Dandekar T.	BMC Bioinformatics	10.1186/1471-2105-7-461	2006
	Antimutator role of the DNA glycosylase mutY gene in Helicobacter pylori.	Huang S, Kang J, Blaser MJ.	J Bacteriol	10.1128/jb.00477-06	2006
Metabolism	Src-dependent tyrosine phosphorylation of non-muscle myosin heavy chain-IIA restricts Listeria monocytogenes cellular infection.	Almeida MT, Mesquita FS, Cruz R, Osorio H, Custodio R, Brito C, Vingadassalom D, Martins M, Martins M, Leong JM, Holden DW, Cabanes D, Sousa S.	J Biol Chem	10.1074/jbc.m114.591313	2015
Phylogeny	Genome sequencing identifies two nearly unchanged strains of persistent Listeria monocytogenes isolated at two different fish processing plants sampled 6 years apart.	Holch A, Webb K, Lukjancenko O, Ussery D, Rosenthal BM, Gram L.	Appl Environ Microbiol	10.1128/aem.03715-12	2013
	Comparing the similarity of different groups of bacteria to the human proteome.	Trost B, Pajon R, Jayaprakash T, Kusalik A.	PLoS One	10.1371/journal.pone.0034007	2012
Genetics	Divergence and redundancy of 16S rRNA sequences in genomes with multiple rrn operons.	Acinas SG, Marcelino LA, Klepac-Ceraj V, Polz MF, Polz MF.	J Bacteriol	10.1128/jb.186.9.2629-2635.2004	2004
Pathogenicity	Heavy-metal and benzalkonium chloride resistance of Listeria monocytogenes isolates from the environment of turkey-processing plants.	Mullapudi S, Siletzky RM, Kathariou S.	Appl Environ Microbiol	10.1128/aem.02426-07	2008
Metabolism	Genome-wide detection and analysis of cell wall-bound proteins with LPxTG-like sorting motifs.	Boekhorst J, de Been MW, Kleerebezem M, Siezen RJ.	J Bacteriol	10.1128/jb.187.14.4928-4934.2005	2005
	The chitinolytic activity of Listeria monocytogenes EGD is regulated by carbohydrates but also by the virulence regulator PrfA.	Larsen MH, Leisner JJ, Ingmer H.	Appl Environ Microbiol	10.1128/aem.00297-10	2010
Phylogeny	Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequences.	Fouts DE.	Nucleic Acids Res	10.1093/nar/gkl732	2006
Genetics	Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource.	Denoeud F, Vergnaud G.	BMC Bioinformatics	10.1186/1471-2105-5-4	2004
	Intracellular gene expression profile of Listeria monocytogenes.	Chatterjee SS, Hossain H, Otten S, Kuenne C, Kuchmina K, Machata S, Domann E, Chakraborty T, Hain T.	Infect Immun	10.1128/iai.74.2.1323-1338.2006	2006
Phylogeny	A population genetics-based and phylogenetic approach to understanding the evolution of virulence in the genus Listeria.	den Bakker HC, Bundrant BN, Fortes ED, Orsi RH, Wiedmann M.	Appl Environ Microbiol	10.1128/aem.00447-10	2010
	The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003.	Ventura M, Zhang Z, Cronin M, Canchaya C, Kenny JG, Fitzgerald GF, van Sinderen D.	J Bacteriol	10.1128/jb.187.24.8411-8426.2005	2005
	Traffic at the tmRNA gene.	Williams KP.	J Bacteriol	10.1128/jb.185.3.1059-1070.2003	2003
	Evolutionary dynamics of the accessory genome of Listeria monocytogenes.	den Bakker HC, Desjardins CA, Griggs AD, Peters JE, Zeng Q, Young SK, Kodira CD, Yandava C, Hepburn TA, Haas BJ, Birren BW, Wiedmann M.	PLoS One	10.1371/journal.pone.0067511	2013
Phylogeny	Characterization of a trinucleotide repeat sequence (CGG)5 and potential use in restriction fragment length polymorphism typing of Mycobacterium tuberculosis.	Otsuka Y, Parniewski P, Zwolska Z, Kai M, Fujino T, Kirikae F, Toyota E, Kudo K, Kuratsuji T, Kirikae T.	J Clin Microbiol	10.1128/jcm.42.8.3538-3548.2004	2004
	Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss.	den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M.	BMC Genomics	10.1186/1471-2164-11-688	2010
Metabolism	Identification of the full set of Listeria monocytogenes penicillin-binding proteins and characterization of PBPD2 (Lmo2812).	Korsak D, Markiewicz Z, Gutkind GO, Ayala JA.	BMC Microbiol	10.1186/1471-2180-10-239	2010
Genetics	Minimum contradiction matrices in whole genome phylogenies.	Thuillard M.	Evol Bioinform Online	10.4137/ebo.s909	2008
Enzymology	The TyrA family of aromatic-pathway dehydrogenases in phylogenetic context.	Song J, Bonner CA, Wolinsky M, Jensen RA.	BMC Biol	10.1186/1741-7007-3-13	2005
	Role of ctc from Listeria monocytogenes in osmotolerance.	Gardan R, Duche O, Leroy-Setrin S, Labadie J, European Listeria Genome Consortium.	Appl Environ Microbiol	10.1128/aem.69.1.154-161.2003	2003
	Construction, characterization, and use of two Listeria monocytogenes site-specific phage integration vectors.	Lauer P, Chow MY, Loessner MJ, Portnoy DA, Calendar R.	J Bacteriol	10.1128/jb.184.15.4177-4186.2002	2002
Phylogeny	Proteome-wide functional classification and identification of prokaryotic transmembrane proteins by transmembrane topology similarity comparison.	Arai M, Okumura K, Satake M, Shimizu T.	Protein Sci	10.1110/ps.04814404	2004
Genetics	Fine-structured multi-scaling long-range correlations in completely sequenced genomes--features, origin, and classification.	Knoch TA, Goker M, Lohner R, Abuseiris A, Grosveld FG.	Eur Biophys J	10.1007/s00249-009-0489-y	2009
	Listeria monocytogenes surface proteins: from genome predictions to function.	Bierne H, Cossart P.	Microbiol Mol Biol Rev	10.1128/mmbr.00039-06	2007

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#34597	Collection of Institut Pasteur ; Curators of the CIP; CIP 107775
#68371	Automatically annotated from API 50CH acid .
#68376	Automatically annotated from API LIST .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Listeria innocua (CIP 107775, CRBIP13.24, CLIP 11262)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

API LIST

API biotype100

Isolation, sampling and environmental information

Isolation

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Risk assessment

Sequence information

Genome-based predictions

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