Listeria innocua 58 is a facultative anaerobe, mesophilic, Gram-positive prokaryote that was isolated from brain of cow.
Gram-positive rod-shaped facultative anaerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Listeriaceae |
| Genus Listeria |
| Species Listeria innocua |
| Full scientific name Listeria innocua (ex Seeliger and Schoofs 1979) Seeliger 1983 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8869 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 8869 | BHI MEDIUM (DSMZ Medium 215) | Medium recipe at MediaDive | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water | ||
| 41842 | MEDIUM 29- Brain heart agar | Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g) | |||
| 120122 | CIP Medium 29 | Medium recipe at CIP |
| 120122 | Oxygen tolerancefacultative anaerobe |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8869 | A31 | A1gamma m-Dpm-direct |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68376 | 18333 ChEBI | D-arabitol | + | builds acid from | from API LIST |
| 68374 | 18333 ChEBI | D-arabitol | - | builds acid from | from API ID32E |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68374 | 18024 ChEBI | D-galacturonic acid | - | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | - | builds acid from | from API ID32E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68374 | 16899 ChEBI | D-mannitol | - | builds acid from | from API ID32E |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | + | fermentation | from API Coryne |
| 68376 | 16988 ChEBI | D-ribose | - | builds acid from | from API LIST |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68376 | 16443 ChEBI | D-tagatose | - | builds acid from | from API LIST |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 68376 | 4853 ChEBI | esculin | + | hydrolysis | from API LIST |
| 120122 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68376 | 29042 ChEBI | glucose 1-phosphate | - | builds acid from | from API LIST |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68374 | 30849 ChEBI | L-arabinose | - | builds acid from | from API ID32E |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68376 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API LIST |
| 68374 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API ID32E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 17716 ChEBI | lactose | + | fermentation | from API Coryne |
| 68374 | 25094 ChEBI | lysine | - | degradation | from API ID32E |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68374 | 17306 ChEBI | maltose | - | builds acid from | from API ID32E |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68376 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API LIST |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 120122 | 17632 ChEBI | nitrate | - | reduction | |
| 120122 | 17632 ChEBI | nitrate | + | respiration | |
| 120122 | 16301 ChEBI | nitrite | - | reduction | |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68374 | Potassium 5-ketogluconate | - | builds acid from | from API ID32E | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68374 | 15963 ChEBI | ribitol | - | builds acid from | from API ID32E |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68374 | 17992 ChEBI | sucrose | - | builds acid from | from API ID32E |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68374 | 27082 ChEBI | trehalose | - | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | - | energy source | from API ID32E |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68374 | 16199 ChEBI | urea | + | hydrolysis | from API ID32E |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 120122 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 120122 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68379 | alkaline phosphatase | + | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68374 | alpha-galactosidase | - | 3.2.1.22 | from API ID32E |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68374 | alpha-glucosidase | + | 3.2.1.20 | from API ID32E |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68374 | alpha-maltosidase | + | from API ID32E | |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68376 | alpha-mannosidase | + | 3.2.1.24 | from API LIST |
| 120122 | amylase | - | ||
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 120122 | beta-galactosidase | - | 3.2.1.23 | |
| 68374 | beta-galactosidase | + | 3.2.1.23 | from API ID32E |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68376 | beta-glucosidase | + | 3.2.1.21 | from API LIST |
| 68374 | beta-glucosidase | + | 3.2.1.21 | from API ID32E |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68374 | beta-glucuronidase | - | 3.2.1.31 | from API ID32E |
| 120122 | caseinase | - | 3.4.21.50 | |
| 8869 | catalase | + | 1.11.1.6 | |
| 120122 | catalase | + | 1.11.1.6 | |
| 68379 | catalase | + | 1.11.1.6 | from API Coryne |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 8869 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 120122 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 120122 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 120122 | lecithinase | - | ||
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68374 | lipase | - | from API ID32E | |
| 68382 | lipase (C 14) | - | from API zym | |
| 120122 | lysine decarboxylase | - | 4.1.1.18 | |
| 68374 | lysine decarboxylase | - | 4.1.1.18 | from API ID32E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API Coryne |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 120122 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 120122 | oxidase | - | ||
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68374 | urease | + | 3.5.1.5 | from API ID32E |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | ||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||
| @ref | 46272 | |||||||||||||||||||||||||||
|
||||||||||||||||||||||||||||
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8869 | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | + | + | + | + | + | + | + | + | + | + | - | - | + | - | - | - | - | - | + | + | - | - | - | - | - | + | - | - | - | - | |
| 8869 | - | +/- | + | - | - | - | - | - | - | - | - | +/- | +/- | +/- | - | +/- | - | - | - | - | +/- | +/- | +/- | +/- | +/- | +/- | +/- | +/- | +/- | +/- | - | - | +/- | - | - | - | - | - | +/- | +/- | - | - | - | - | - | +/- | - | - | - | - |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46272 | - | - | - | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | + | - | - | - | - | + | - | - | - | - | - | - | + | - |
| @ref | Differentiation L. innocura(+)/ L.monoytogenes(-)DIM | ESC | alpha MAN | DARL | XYL | RHA | Acid from methyl-alpha-D-glucopyranosideMDG | RIB | G1P | TAG | beta hemolysis presentbeta HEM | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8869 | + | + | + | + | - | + | + | - | - | - | - | |
| 8869 | + | + | + | + | - | + | + | - | - | - | - | |
| 8869 | + | + | + | + | +/- | + | + | - | - | - | - | |
| 8869 | + | + | + | + | - | + | + | - | - | - | not determinedn.d. | |
| 8869 | + | + | + | + | +/- | + | + | - | - | - | not determinedn.d. | |
| 8869 | + | + | + | + | - | + | + | - | - | - | - | |
| 8869 | + | + | + | + | - | + | + | - | - | - | not determinedn.d. |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Mammals | #Bovinae (Cow, Cattle) | |
| #Host Body-Site | #Organ | #Brain |
Global distribution of 16S sequence X98527 (>99% sequence identity) for Listeria monocytogenes from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM2859612v1 assembly for Listeria innocua ATCC 33090 | complete | 1642 | 98.96 | ||||
| 124043 | ASM2472156v1 assembly for Listeria innocua F4078 | complete | 1642 | 97.12 | ||||
| 124043 | ASM1452742v1 assembly for Listeria innocua F4078 | contig | 1642 | 76.39 | ||||
| 124043 | ASM4266052v1 assembly for Listeria innocua CCUG 15531 | scaffold | 1642 | 75.19 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Listeria innocua strain ATCC 33090 16S ribosomal RNA gene, partial sequence | FJ774235 | 1501 | 1642 | ||
| 20218 | Listeria innocua strain ATCC 33090 16S ribosomal RNA gene, partial sequence | JF967625 | 1514 | 1642 | ||
| 20218 | Listeria innocua 16S and 23S ribosomal RNA genes, partial sequence | U57914 | 335 | 1642 | ||
| 20218 | Listeria innocua 16S and 23S ribosomal RNA genes, partial sequence, Ile-tRNA and Ala-tRNA genes, complete sequence | U57915 | 585 | 1642 | ||
| 20218 | L.innocua DNA for 16S ribosomal RNA | X98527 | 1404 | 1642 | ||
| 8869 | Listeria innocua strain ATCC 33090 16S ribosomal RNA gene, partial sequence | GQ911559 | 805 | 1642 | ||
| 67770 | L.innocua gene for 16S ribosomal RNA | X56152 | 1469 | 1642 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 87.80 | no |
| 125439 | motility | BacteriaNetⓘ | no | 66.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 66.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 88.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 84.40 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.46 | no |
| 125438 | aerobic | aerobicⓘ | no | 86.98 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 51.14 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.39 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 66.02 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Lysozyme Modification Using Proteolytic Enzymes. | Tomczyk L, Lesnierowski G, Cegielska-Radziejewska R. | Molecules | 10.3390/molecules28176260 | 2023 | ||
| Detection of Listeria monocytogenes in foods with a textile organic electrochemical transistor biosensor. | Vizzini P, Beltrame E, Coppede N, Vurro F, Andreatta F, Torelli E, Manzano M. | Appl Microbiol Biotechnol | 10.1007/s00253-023-12543-y | 2023 | ||
| Enzymology | Antimicrobial efficacy and inactivation kinetics of a novel LED-based UV-irradiation technology. | Schobel H, Diem G, Kiechl J, Chiste D, Bertacchi G, Mayr A, Wilflingseder D, Lass-Florl C, Posch W. | J Hosp Infect | 10.1016/j.jhin.2022.12.023 | 2023 | |
| Physicochemical and Biological Characterization of Encapsulated Olive Leaf Extracts for Food Preservation. | Medfai W, Oueslati I, Dumas E, Harzalli Z, Viton C, Mhamdi R, Gharsallaoui A. | Antibiotics (Basel) | 10.3390/antibiotics12060987 | 2023 | ||
| Phage Display-Derived Monoclonal Antibodies Against Internalins A and B Allow Specific Detection of Listeria monocytogenes. | Moreira GMSG, Gronow S, Dubel S, Mendonca M, Moreira AN, Conceicao FR, Hust M. | Front Public Health | 10.3389/fpubh.2022.712657 | 2022 | ||
| Headspace solid-phase microextraction method for extracting volatile constituents from the different parts of Saudi Anethum graveolens L. and their antimicrobial activity. | Aati HY, Perveen S, Aati S, Orfali R, Alqahtani JH, Al-Taweel AM, Wanner J, Aati AY. | Heliyon | 10.1016/j.heliyon.2022.e09051 | 2022 | ||
| Antimicrobial Activities Evaluation and Phytochemical Screening of Some Selected Plant Materials Used in Traditional Medicine. | Stuper-Szablewska K, Szablewski T, Przybylska-Balcerek A, Szwajkowska-Michalek L, Krzyzaniak M, Swierk D, Cegielska-Radziejewska R, Krejpcio Z. | Molecules | 10.3390/molecules28010244 | 2022 | ||
| Phylogeny | Siamese Networks for Clinically Relevant Bacteria Classification Based on Raman Spectroscopy. | Contreras J, Mostafapour S, Popp J, Bocklitz T. | Molecules | 10.3390/molecules29051061 | 2024 | |
| Novel Lactobacillaceae strains and consortia to produce propionate-containing fermentates as biopreservatives. | Buljubasic E, Bambace MF, Christensen MHL, Ng KS, Huertas-Diaz L, Sundekilde U, Marietou A, Schwab C. | Microb Biotechnol | 10.1111/1751-7915.14392 | 2024 | ||
| Probiotic Enterococcus mundtii Isolate Protects the Model Insect Tribolium castaneum against Bacillus thuringiensis. | Grau T, Vilcinskas A, Joop G. | Front Microbiol | 10.3389/fmicb.2017.01261 | 2017 | ||
| Determination of Antibacterial and Technological Properties of Vaginal Lactobacilli for Their Potential Application in Dairy Products. | Siroli L, Patrignani F, Serrazanetti DI, Parolin C, Nahui Palomino RA, Vitali B, Lanciotti R. | Front Microbiol | 10.3389/fmicb.2017.00166 | 2017 | ||
| Sambucus Nigra Extracts-Natural Antioxidants and Antimicrobial Compounds. | Przybylska-Balcerek A, Szablewski T, Szwajkowska-Michalek L, Swierk D, Cegielska-Radziejewska R, Krejpcio Z, Suchowilska E, Tomczyk L, Stuper-Szablewska K. | Molecules | 10.3390/molecules26102910 | 2021 | ||
| Phylogeny | Antimicrobial Activity of Lactones. | Mazur M, Maslowiec D. | Antibiotics (Basel) | 10.3390/antibiotics11101327 | 2022 | |
| Antibacterial Activity of Three Extra Virgin Olive Oils of the Campania Region, Southern Italy, Related to Their Polyphenol Content and Composition. | Nazzaro F, Fratianni F, Cozzolino R, Martignetti A, Malorni L, De Feo V, Cruz AG, d'Acierno A. | Microorganisms | 10.3390/microorganisms7090321 | 2019 | ||
| Heterologous expression and antimicrobial potential of class II bacteriocins. | Elisa Heesemann Rosenkilde C, Olsen Lutzhoft D, Vazquez-Uribe R, Otto Alexander Sommer M. | Gut Microbes | 10.1080/19490976.2024.2369338 | 2024 | ||
| Almond [Prunus dulcis (Mill.) DA Webb] Processing Residual Hull as a New Source of Bioactive Compounds: Phytochemical Composition, Radical Scavenging and Antimicrobial Activities of Extracts from Italian Cultivars ('Tuono', 'Pizzuta', 'Romana'). | Fabroni S, Trovato A, Ballistreri G, Tortorelli SA, Foti P, Romeo FV, Rapisarda P. | Molecules | 10.3390/molecules28020605 | 2023 | ||
| Establishment and Validation of a Two-Step LAMP Assay for Detection of Bacillus cereus-Group Isolates in Food and Their Possibility of Non-haemolytic Enterotoxin Production. | Busch A, Schotte U, Jessberger N, Frentzel H, Plotz M, Abdulmawjood A. | Front Microbiol | 10.3389/fmicb.2022.930648 | 2022 | ||
| Pathogenicity | Fast and Easy Phage-Tagging and Live/Dead Analysis for the Rapid Monitoring of Bacteriophage Infection. | Low HZ, Bohnlein C, Sprotte S, Wagner N, Fiedler G, Kabisch J, Franz CMAP. | Front Microbiol | 10.3389/fmicb.2020.602444 | 2020 | |
| Quantitative Assessment of Antimicrobial Activity of PLGA Films Loaded with 4-Hexylresorcinol. | Kemme M, Heinzel-Wieland R. | J Funct Biomater | 10.3390/jfb9010004 | 2018 | ||
| Development and Evaluation of qPCR Detection Method and Zn-MgO/Alginate Active Packaging for Controlling Listeria monocytogenes Contamination in Cold-Smoked Salmon. | Vizzini P, Beltrame E, Zanet V, Vidic J, Manzano M. | Foods | 10.3390/foods9101353 | 2020 | ||
| Recent Advances on Multi-Parameter Flow Cytometry to Characterize Antimicrobial Treatments. | Leonard L, Bouarab Chibane L, Ouled Bouhedda B, Degraeve P, Oulahal N. | Front Microbiol | 10.3389/fmicb.2016.01225 | 2016 | ||
| Development of a Droplet Digital Polymerase Chain Reaction for Rapid and Simultaneous Identification of Common Foodborne Pathogens in Soft Cheese. | Cremonesi P, Cortimiglia C, Picozzi C, Minozzi G, Malvisi M, Luini M, Castiglioni B. | Front Microbiol | 10.3389/fmicb.2016.01725 | 2016 | ||
| Stress survival islet 1 (SSI-1) survey in Listeria monocytogenes reveals an insert common to listeria innocua in sequence type 121 L. monocytogenes strains. | Hein I, Klinger S, Dooms M, Flekna G, Stessl B, Leclercq A, Hill C, Allerberger F, Wagner M. | Appl Environ Microbiol | 10.1128/aem.02159-10 | 2011 | ||
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| Metabolism | Isolation, purification, and amino acid sequence of lactobin A, one of the two bacteriocins produced by Lactobacillus amylovorus LMG P-13139. | Contreras BG, De Vuyst L, Devreese B, Busanyova K, Raymaeckers J, Bosman F, Sablon E, Vandamme EJ. | Appl Environ Microbiol | 10.1128/aem.63.1.13-20.1997 | 1997 | |
| Glucose Oxidase, an Enzyme "Ferrari": Its Structure, Function, Production and Properties in the Light of Various Industrial and Biotechnological Applications. | Bauer JA, Zamocka M, Majtan J, Bauerova-Hlinkova V. | Biomolecules | 10.3390/biom12030472 | 2022 | ||
| Detection, identification and quantification of Campylobacter jejuni, coli and lari in food matrices all at once using multiplex qPCR. | Vondrakova L, Pazlarova J, Demnerova K. | Gut Pathog | 10.1186/1757-4749-6-12 | 2014 | ||
| Optimization of High-Pressure Processing for Microbial Inactivation in Pigmented Rice Grass Juice and Quality Impact Assessment during Refrigerated Storage. | Dao UH, Lamphun JN, Tongdonyod S, Taya S, Phongthai S, Klangpetch W. | Foods | 10.3390/foods13182995 | 2024 | ||
| Development of Fructooligosaccharide-Rich Sugarcane Juice by Enzymatic Method and Enhancement of Its Microbial Safety Using High-Pressure Processing. | Kaewsalud T, Liony JM, Tongdonyod S, Phongthai S, Klangpetch W. | Foods | 10.3390/foods14193417 | 2025 | ||
| Antibacterial Peptides Produced by Alcalase from Cowpea Seed Proteins. | Osman A, Enan G, Al-Mohammadi AR, Abdel-Shafi S, Abdel-Hameid S, Sitohy MZ, El-Gazzar N | Antibiotics (Basel) | 10.3390/antibiotics10070870 | 2021 | ||
| Phylogeny | Characterization of Partially Purified Bacteriocins Produced by Enterococcus faecium Strains Isolated from Soybean Paste Active Against Listeria spp. and Vancomycin-Resistant Enterococci. | Fugaban JII, Vazquez Bucheli JE, Holzapfel WH, Todorov SD | Microorganisms | 10.3390/microorganisms9051085 | 2021 | |
| Phylogeny | Diversity and Antimicrobial Activity towards Listeria spp. and Escherichia coli among Lactic Acid Bacteria Isolated from Ready-to-Eat Seafood. | Stupar J, Holoymoen IG, Hoel S, Lerfall J, Rustad T, Jakobsen AN | Foods | 10.3390/foods10020271 | 2021 | |
| Biotechnology | Condensation Removal Practices and Their Potential for Contributing to Environmental Pathogen Contamination in Food Processing Facilities. | Martinez BA, Bianchini A, Stratton J, Raabe O, Swanson S | J Food Prot | 10.4315/JFP-20-337 | 2021 | |
| Lactococcus lactis Diversity Revealed by Targeted Amplicon Sequencing of purR Gene, Metabolic Comparisons and Antimicrobial Properties in an Undefined Mixed Starter Culture Used for Soft-Cheese Manufacture. | Saltaji S, Rue O, Sopena V, Sable S, Tambadou F, Didelot S, Chevrot R | Foods | 10.3390/foods9050622 | 2020 | ||
| Metabolism | Evaluation of antibacterial properties of lactic acid bacteria from traditionally and industrially produced fermented sausages from Germany. | Bungenstock L, Abdulmawjood A, Reich F | PLoS One | 10.1371/journal.pone.0230345 | 2020 | |
| Biotechnology | Bacteriocin-like inhibitory substance of Pediococcus pentosaceus as a biopreservative for Listeria sp. control in ready-to-eat pork ham. | de Azevedo POS, Mendonca CMN, Seibert L, Dominguez JM, Converti A, Gierus M, Oliveira RPS | Braz J Microbiol | 10.1007/s42770-020-00245-w | 2020 | |
| Phylogeny | Characterization of lactic acid bacteria isolated from a traditional Ivoirian beer process to develop starter cultures for safe sorghum-based beverages. | Aka S, Dridi B, Bolotin A, Yapo EA, Koussemon-Camara M, Bonfoh B, Renault P | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2020.108547 | 2020 | |
| Phylogeny | [Isolation of enterocin-producing Enterococcus hirae strains from the intestinal content of the Patagonian mussel (Mytilus edulis platensis)]. | Vallejo M, Parada RB, Marguet ER | Rev Argent Microbiol | 10.1016/j.ram.2019.06.001 | 2019 | |
| Efficacy of olive leaf extract (Olea europaea L. cv Gentile di Larino) in marinated anchovies (Engraulis encrasicolus, L.) process. | Testa B, Lombardi SJ, Macciola E, Succi M, Tremonte P, Iorizzo M | Heliyon | 10.1016/j.heliyon.2019.e01727 | 2019 | ||
| Metabolism | Antilisterial activity of dromedary lactoferrin peptic hydrolysates. | Jrad Z, El-Hatmi H, Adt I, Gouin S, Jardin J, Oussaief O, Dbara M, Arroum S, Khorchani T, Degraeve P, Oulahal N | J Dairy Sci | 10.3168/jds.2018-15548 | 2019 | |
| Biotechnology | Fate of selected pathogens in spiked < | Cenci-Goga BT, Karama M, Sechi P, Iulietto MF, Grispoldi L, Selvaggini R, Ceccarelli M, Barbera S | Meat Sci | 10.1016/j.meatsci.2018.02.002 | 2018 | |
| Antilisterial activity of Cymbopogon citratus on crabsticks. | Ramroop P, Neetoo H | AIMS Microbiol | 10.3934/microbiol.2018.1.67 | 2018 | ||
| The biodiversity of Lactobacillus spp. from Iranian raw milk Motal cheese and antibacterial evaluation based on bacteriocin-encoding genes. | Azizi F, Habibi Najafi MB, Edalatian Dovom MR | AMB Express | 10.1186/s13568-017-0474-2 | 2017 | ||
| Chemical Composition, Antioxidant and Antimicrobial Activity of Essential Oils from Organic Fennel, Parsley, and Lavender from Spain. | Marin I, Sayas-Barbera E, Viuda-Martos M, Navarro C, Sendra E | Foods | 10.3390/foods5010018 | 2016 | ||
| Stress | Homology-Based Modeling of Universal Stress Protein from Listeria innocua Up-Regulated under Acid Stress Conditions. | Tremonte P, Succi M, Coppola R, Sorrentino E, Tipaldi L, Picariello G, Pannella G, Fraternali F | Front Microbiol | 10.3389/fmicb.2016.01998 | 2016 | |
| Biotechnology | Modeling the isothermal inactivation curves of Listeria innocua CECT 910 in a vegetable beverage under low-temperature treatments and different pH levels. | Vega S, Saucedo D, Rodrigo D, Pina C, Armero C, Martinez A | Food Sci Technol Int | 10.1177/1082013215624807 | 2016 | |
| Enzymology | Purification and characterization of a novel plantaricin, KL-1Y, from Lactobacillus plantarum KL-1. | Rumjuankiat K, Perez RH, Pilasombut K, Keawsompong S, Zendo T, Sonomoto K, Nitisinprasert S | World J Microbiol Biotechnol | 10.1007/s11274-015-1851-0 | 2015 | |
| Stress | Antilisterial activity of bacteriocinogenic Pediococcus acidilactici HA6111-2 and Lactobacillus plantarum ESB 202 grown under pH and osmotic stress conditions. | Engelhardt T, Albano H, Kisko G, Mohacsi-Farkas C, Teixeira P | Food Microbiol | 10.1016/j.fm.2014.11.015 | 2014 | |
| Enzymology | Pulsed light decontamination of endive salad and mung bean sprouts and impact on color and respiration activity. | Kramer B, Wunderlich J, Muranyi P | J Food Prot | 10.4315/0362-028X.JFP-14-262 | 2015 | |
| Pathogenicity | Comparative study of the effects of citral on the growth and injury of Listeria innocua and Listeria monocytogenes cells. | Silva-Angulo AB, Zanini SF, Rosenthal A, Rodrigo D, Klein G, Martinez A | PLoS One | 10.1371/journal.pone.0114026 | 2015 | |
| Biotechnology | Refined liquid smoke: a potential antilisterial additive to cold-smoked sockeye salmon (Oncorhynchus nerka). | Montazeri N, Himelbloom BH, Oliveira AC, Leigh MB, Crapo CA | J Food Prot | 10.4315/0362-028X.JFP-12-368 | 2013 | |
| Biotechnology | Diversity of Streptococcus thermophilus in bacteriocin production; inhibitory spectrum and occurrence of thermophilin genes. | Rossi F, Marzotto M, Cremonese S, Rizzotti L, Torriani S | Food Microbiol | 10.1016/j.fm.2013.02.006 | 2013 | |
| Pathogenicity | Antimicrobial activity and hydrophobicity of edible whey protein isolate films formulated with nisin and/or glucose oxidase. | Murillo-Martinez MM, Tello-Solis SR, Garcia-Sanchez MA, Ponce-Alquicira E | J Food Sci | 10.1111/1750-3841.12078 | 2013 | |
| Phylogeny | Characterization of two safe Enterococcus strains producing enterocins isolated from Egyptian dairy products. | El-Ghaish S, Hadji-Sfaxi I, Ahmadova A, Choiset Y, Rabesona H, Sitohy M, Haertle T, Chobert JM | Benef Microbes | 10.3920/BM2011.0001 | 2011 | |
| Enzymology | Chemical composition and antioxidant and anti-Listeria activities of essential oils obtained from some Egyptian plants. | Viuda-Martos M, El Gendy Ael-N, Sendra E, Fernandez-Lopez J, Abd El Razik KA, Omer EA, Perez-Alvarez JA | J Agric Food Chem | 10.1021/jf101620c | 2010 | |
| Pathogenicity | Antilisterial effects of gravinol-s grape seed extract at low levels in aqueous media and its potential application as a produce wash. | Bisha B, Weinsetel N, Brehm-Stecher BF, Mendonca A | J Food Prot | 10.4315/0362-028x-73.2.266 | 2010 | |
| Pathogenicity | Development of a sanitizing fabric wipe for use on food contact surfaces. | Lee J, Lopes JA, Pascall MA | J Food Sci | 10.1111/j.1750-3841.2007.00558.x | 2007 | |
| Pathogenicity | Identification of antibacterial peptides from bovine kappa-casein. | Lopez-Exposito I, Minervini F, Amigo L, Recio I | J Food Prot | 10.4315/0362-028x-69.12.2992 | 2006 | |
| Pathogenicity | Inactivation of Listeria innocua in milk and orange juice by ultrahigh-pressure homogenization. | Brinez WJ, Roig-Sagues AX, Hernandez Herrero MM, Guamis Lopez B | J Food Prot | 10.4315/0362-028x-69.1.86 | 2006 | |
| Pathogenicity | Modelling the influence of single acid and mixture on bacterial growth. | Coroller L, Guerrot V, Huchet V, Le Marc Y, Mafart P, Sohier D, Thuault D | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2004.10.014 | 2005 | |
| Biotechnology | Modelling the growth kinetics of Listeria as a function of temperature, pH and organic acid concentration. | Le Marc Y, Huchet V, Bourgeois CM, Guyonnet JP, Mafart P, Thuault D | Int J Food Microbiol | 10.1016/s0168-1605(01)00640-7 | 2002 | |
| Metabolism | Effect of bacteriocin-producing lactobacilli on the survival of Escherichia coli and Listeria in a dynamic model of the stomach and the small intestine. | Ganzle MG, Hertel C, van der Vossen JM, Hammes WP | Int J Food Microbiol | 10.1016/s0168-1605(99)00025-2 | 1999 | |
| Biotechnology | Exposure to cellulose acetate films incorporated with garlic essential oil does not lead to homologous resistance in Listeria innocua ATCC 33090. | Marques CS, Arruda TR, Silva RRA, Ferreira ALV, Oliveira WLA, Rocha F, Mendes LA, de Oliveira TV, Vanetti MCD, Soares NFF | Food Res Int | 10.1016/j.foodres.2022.111676 | 2022 |
| #8869 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20649 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #41842 | ; Curators of the CIP; |
| #46272 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 15531 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68374 | Automatically annotated from API ID32E . |
| #68376 | Automatically annotated from API LIST . |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120122 | Collection of Institut Pasteur ; Curators of the CIP; CIP 80.11 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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