Saccharopolyspora antimicrobica (DSM 45119, CCM 7463, KCTC 19303)

Name: Saccharopolyspora antimicrobica (DSM 45119, CCM 7463, KCTC 19303)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13467

Type strain

Strain Designation 05-74, I05-00074

Culture col. no. DSM 45119 CCM 7463 KCTC 19303 05-74 I05-00074 2 more

NCBI tax ID(s) 455193

Special Collections DSMZ JCM KCTC Wink compendium Literature strains

History DSMZ <- Y.-Q. Zhang; 05-74 <- L.-Y. Yu et al. JCM <-- CCM 7463 <-- Y.-Q. Zhang I05-00074. KCTC <- YQ Zhang, Inst. Med. Biotechnol, China

Links

Saccharopolyspora antimicrobica 05-74 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from forest soil.

spore-forming Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 396626

KCTC 19303,JCM 16610,DSM 45119

@ref 20215

Last LPSN update 2026-05-29 08:28:03

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Saccharopolyspora

Species Saccharopolyspora antimicrobica

Full scientific name Saccharopolyspora antimicrobica Yuan et al. 2008

Morphology

Cell morphology

@ref	Gram stain	Confidence
32466	positive
67771	positive
125439	positive	98.138
125438	positive	90.789

Colony morphology

@ref	Colony color	Incubation period	Medium used
20166	Beige (1001)	10-14 days	ISP 2
20166	Beige (1001)	10-14 days	ISP 3
20166	Beige (1001)	10-14 days	ISP 4
20166	Ochre brown (8001)	10-14 days	ISP 5
20166	Ochre brown (8001)	10-14 days	ISP 6
20166	Beige (1001)	10-14 days	ISP 7

Multicellular morphology

@ref	Forms multicellular complex	Medium name
20166		ISP 2
20166		ISP 3
20166		ISP 4
20166		ISP 5
20166		ISP 6
20166		IPS 7

Pigmentation

32466

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12358	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
12358	GPHF-MEDIUM (DSMZ Medium 553)	Medium recipe at MediaDive	Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water
20166	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
20166	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
20166	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
20166	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
20166	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
20166	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes

Culture temp

@ref	Growth	Type	Temperature (°C)
12358	positive	growth	28
20166	positive	optimum	28
32466	positive	growth	20-45
32466	positive	optimum	32.5
67770	positive	growth	28
67771	positive	growth	28-37

Culture pH

@ref	Ability	Type	PH	PH range
32466	positive	optimum	7.25
32466	positive	growth	6-8.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
32466	aerobe
67771	aerobe
125439	obligate aerobe	98.189

Spore formation

@ref	Spore formation	Confidence
32466
125438		90.549

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32466	NaCl	positive	growth	0-7 %

Observation

67770

Observationquinones: MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32466	30089 ChEBI	acetate	+	carbon source
32466	22599 ChEBI	arabinose	+	carbon source
32466	17057 ChEBI	cellobiose	+	carbon source
32466	16947 ChEBI	citrate	+	carbon source
32466	4853 ChEBI	esculin	+	hydrolysis
32466	28757 ChEBI	fructose	+	carbon source
32466	28260 ChEBI	galactose	+	carbon source
32466	5417 ChEBI	glucosamine	+	carbon source
32466	17234 ChEBI	glucose	+	carbon source
32466	17716 ChEBI	lactose	+	carbon source
32466	15792 ChEBI	malonate	+	carbon source
32466	17306 ChEBI	maltose	+	carbon source
32466	29864 ChEBI	mannitol	+	carbon source
32466	37684 ChEBI	mannose	+	carbon source
32466	28053 ChEBI	melibiose	+	carbon source
32466	17632 ChEBI	nitrate	+	reduction
32466	28044 ChEBI	phenylalanine	+	carbon source
32466	16634 ChEBI	raffinose	+	carbon source
32466	26546 ChEBI	rhamnose	+	carbon source
32466	15963 ChEBI	ribitol	+	carbon source
32466	33942 ChEBI	ribose	+	carbon source
32466	17814 ChEBI	salicin	+	carbon source
32466	30911 ChEBI	sorbitol	+	carbon source
32466	17992 ChEBI	sucrose	+	carbon source
32466	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
32466	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	+	3.1.3.2	from API zym
32466	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
32466	alpha-galactosidase	+	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
32466	gelatinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	+	3.4.21.4	from API zym
32466	urease	+	3.5.1.5
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	valine metabolism	100	9 of 9
66794	4-hydroxymandelate degradation	100	9 of 9
66794	adipate degradation	100	2 of 2
66794	ethanol fermentation	100	2 of 2
66794	threonine metabolism	100	10 of 10
66794	lipoate biosynthesis	100	5 of 5
66794	Entner Doudoroff pathway	100	10 of 10
66794	glycogen metabolism	100	5 of 5
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	enterobactin biosynthesis	100	3 of 3
66794	3-chlorocatechol degradation	100	5 of 5
66794	butanoate fermentation	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	biotin biosynthesis	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	propanol degradation	100	7 of 7
66794	palmitate biosynthesis	100	22 of 22
66794	acetate fermentation	100	4 of 4
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	cellulose degradation	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	cyanate degradation	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	suberin monomers biosynthesis	100	2 of 2
66794	ceramide biosynthesis	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	taurine degradation	100	1 of 1
66794	formaldehyde oxidation	100	3 of 3
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	glycine betaine biosynthesis	100	5 of 5
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	vitamin K metabolism	100	5 of 5
66794	NAD metabolism	94.44	17 of 18
66794	flavin biosynthesis	93.33	14 of 15
66794	citric acid cycle	92.86	13 of 14
66794	phenylalanine metabolism	92.31	12 of 13
66794	leucine metabolism	92.31	12 of 13
66794	proline metabolism	90.91	10 of 11
66794	glutamate and glutamine metabolism	89.29	25 of 28
66794	chorismate metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	allantoin degradation	88.89	8 of 9
66794	vitamin B12 metabolism	88.24	30 of 34
66794	dTDPLrhamnose biosynthesis	87.5	7 of 8
66794	ketogluconate metabolism	87.5	7 of 8
66794	tryptophan metabolism	86.84	33 of 38
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	purine metabolism	86.17	81 of 94
66794	heme metabolism	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	aclacinomycin biosynthesis	85.71	6 of 7
66794	methionine metabolism	84.62	22 of 26
66794	pyrimidine metabolism	84.44	38 of 45
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	alanine metabolism	82.76	24 of 29
66794	histidine metabolism	82.76	24 of 29
66794	glycolysis	82.35	14 of 17
66794	pentose phosphate pathway	81.82	9 of 11
66794	phenol degradation	80	16 of 20
66794	4-hydroxyphenylacetate degradation	80	8 of 10
66794	factor 420 biosynthesis	80	4 of 5
66794	gallate degradation	80	4 of 5
66794	propionate fermentation	80	8 of 10
66794	starch degradation	80	8 of 10
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	glutathione metabolism	78.57	11 of 14
66794	photosynthesis	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	lipid metabolism	77.42	24 of 31
66794	urea cycle	76.92	10 of 13
66794	vitamin B1 metabolism	76.92	10 of 13
66794	non-pathway related	76.32	29 of 38
66794	gluconeogenesis	75	6 of 8
66794	cyclohexanol degradation	75	3 of 4
66794	arginine metabolism	75	18 of 24
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	3-phenylpropionate degradation	73.33	11 of 15
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	tyrosine metabolism	71.43	10 of 14
66794	tetrahydrofolate metabolism	71.43	10 of 14
66794	oxidative phosphorylation	71.43	65 of 91
66794	bile acid biosynthesis, neutral pathway	70.59	12 of 17
66794	polyamine pathway	69.57	16 of 23
66794	androgen and estrogen metabolism	68.75	11 of 16
66794	degradation of sugar alcohols	68.75	11 of 16
66794	carotenoid biosynthesis	68.18	15 of 22
66794	degradation of sugar acids	68	17 of 25
66794	degradation of pentoses	67.86	19 of 28
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	methane metabolism	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
66794	cysteine metabolism	66.67	12 of 18
66794	octane oxidation	66.67	2 of 3
66794	lysine metabolism	66.67	28 of 42
66794	acetoin degradation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	isoprenoid biosynthesis	65.38	17 of 26
66794	d-xylose degradation	63.64	7 of 11
66794	metabolism of disaccharids	63.64	7 of 11
66794	vitamin B6 metabolism	63.64	7 of 11
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	degradation of hexoses	61.11	11 of 18
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	creatinine degradation	60	3 of 5
66794	daunorubicin biosynthesis	55.56	5 of 9
66794	cholesterol biosynthesis	54.55	6 of 11
66794	ascorbate metabolism	54.55	12 of 22
66794	phenylpropanoid biosynthesis	53.85	7 of 13
66794	kanosamine biosynthesis II	50	1 of 2
66794	sphingosine metabolism	50	3 of 6
66794	carnitine metabolism	50	4 of 8
66794	glycine metabolism	50	5 of 10
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	quinate degradation	50	1 of 2
66794	resorcinol degradation	50	1 of 2
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	toluene degradation	50	2 of 4
66794	lactate fermentation	50	2 of 4
66794	phenylmercury acetate degradation	50	1 of 2
66794	myo-inositol biosynthesis	50	5 of 10
66794	coenzyme M biosynthesis	50	5 of 10
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	CMP-KDO biosynthesis	50	2 of 4
66794	phosphatidylethanolamine bioynthesis	46.15	6 of 13
66794	sulfate reduction	46.15	6 of 13
66794	nitrate assimilation	44.44	4 of 9
66794	lipid A biosynthesis	44.44	4 of 9
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	arachidonate biosynthesis	40	2 of 5
66794	hydrogen production	40	2 of 5
66794	D-cycloserine biosynthesis	40	2 of 5
66794	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	chlorophyll metabolism	33.33	6 of 18
66794	sulfoquinovose degradation	33.33	1 of 3
66794	mevalonate metabolism	28.57	2 of 7
66794	arachidonic acid metabolism	27.78	5 of 18
66794	vitamin E metabolism	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
20166	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	-	+	-	+	+	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
12358	forest soil	Temple of Heaven, Beijing	China	CHN	Asia
67770	Soil from the Temple of Heaven	Beijing	China	CHN	Asia
67771	From forest soil	Hebei Province	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12358	1	Risk group (German classification) According to TRBA 466
20166	1	German classification According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM363502v1 assembly for Saccharopolyspora antimicrobica DSM 45119	contig	GCA_003635025	455193.5	2627854288	455193	78.26

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
12358	Saccharopolyspora antimicrobica strain I05-00074 16S ribosomal RNA gene, partial sequence	EF693956	1449		455193
124043	Saccharopolyspora antimicrobica strain CCM 7463 16S ribosomal RNA gene, partial sequence.	MT760141	1345		455193

GC content

@ref	GC-content (mol%)	Method
12358	69.3
67770	70.4	genome sequence analysis
67770	69.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM363502v1 assembly for Saccharopolyspora antimicrobica DSM 45119
NCBI: GCA_003635025

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.19	no
125439	gram_stain	BacteriaNetⓘ	positive	98.14	no
125439	spore_formation	BacteriaNetⓘ	yes	69.09	no
125439	motility	BacteriaNetⓘ	no	88.18	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Saccharopolyspora antimicrobica strain DSM 45119
PATRIC: 455193.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.79	yes
125438	anaerobic	anaerobicⓘ	no	95.81	no
125438	spore-forming	spore-formingⓘ	yes	90.55	yes
125438	aerobic	aerobicⓘ	yes	89.30	yes
125438	thermophilic	thermophileⓘ	no	95.75	no
125438	flagellated	motile2+ⓘ	no	88.19	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P₄₅₀ enzymes.	Harken L, Li SM.	Appl Microbiol Biotechnol	10.1007/s00253-021-11178-1	2021
	Saccharopolyspora oryzae sp. nov., isolated from rhizosphere soil of the wild rice species Oryza rufipogon.	Kammanee S, Muangham S, Butdee W, Klaysubun C, Igarashi Y, Duangmal K.	J Antibiot (Tokyo)	10.1038/s41429-023-00647-6	2023
Phylogeny	Saccharopolyspora maritima sp. nov., an actinomycete isolated from mangrove sediment.	Suksaard P, Srisuk N, Duangmal K	Int J Syst Evol Microbiol	10.1099/ijsem.0.002941	2018
Phylogeny	Saccharopolyspora indica sp. nov., an actinomycete isolated from the rhizosphere of Callistemon citrinus (Curtis).	Vaddavalli R, Peddi S, Kothagauni SY, Begum Z, Gaddam B, Periketi M, Linga VR	Int J Syst Evol Microbiol	10.1099/ijs.0.057539-0	2014
Phylogeny	Saccharopolyspora antimicrobica sp. nov., an actinomycete from soil.	Yuan LJ, Zhang YQ, Guan Y, Wei YZ, Li QP, Yu LY, Li WJ, Zhang YQ	Int J Syst Evol Microbiol	10.1099/ijs.0.65532-0	2008

References

#12358	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45119
#20166	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28687	IJSEM 1180 2008 ( DOI 10.1099/ijs.0.65532-0 , PubMed 18450710 )
#32466	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28687
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Saccharopolyspora antimicrobica (DSM 45119, CCM 7463, KCTC 19303)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Pathway annotation

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003635025

16S sequences

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