Name: Ferrimonas gelatinilytica CJ24
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133991

Type strain:

Species: Ferrimonas gelatinilytica

Strain Designation: CJ24

Culture col. no.: KACC 17065, JCM 18720

Strain history: C.-J. Cha CJ24.

NCBI tax ID(s): 1255257 (species)

Section

Ferrimonas gelatinilytica CJ24 is an anaerobe, Gram-negative, motile bacterium that was isolated from marine sediment.

Gram-negative
motile
ovoid-shaped
anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Ferrimonadaceae*
	Genus	*Ferrimonas*
	Species	**Ferrimonas gelatinilytica**
	Full Scientific Name (LPSN)	Ferrimonas gelatinilytica Rahman and Cha 2013

Information on morphological and physiological properties Morphology

[Ref.: #31017]	Gram stain	negative

[Ref.: #31017]	Cell shape	ovoid-shaped

[Ref.: #31017]	Motility	yes

[Ref.: #31017]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #31017]	growth	15-42 °C
[Ref.: #31017]	optimum	30 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #31017]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31017]			optimum	6
[Ref.: #31017]			growth	6.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31017]

Oxygen tolerance

anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31017]		NaCl		growth	02-07	%
[Ref.: #31017]		NaCl		optimum	2	%

[Ref.: #31017]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31017]	acetate ChEBI	+	carbon source
[Ref.: #31017]	alpha-cyclodextrin ChEBI	+	carbon source
[Ref.: #31017]	arabinose ChEBI	+	carbon source
[Ref.: #31017]	esculin ChEBI	+	hydrolysis
[Ref.: #31017]	lactate ChEBI	+	carbon source
[Ref.: #31017]	nitrate ChEBI	+	reduction
[Ref.: #31017]	thymidine ChEBI	+	carbon source
[Ref.: #31017]	tween 40 ChEBI	+	carbon source
[Ref.: #31017]	tween 80 ChEBI	+	carbon source
[Ref.: #31017]	uridine ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #31017]	alkaline phosphatase	+	3.1.3.1
[Ref.: #31017]	catalase	+	1.11.1.6
[Ref.: #31017]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31017]	Sample type/isolated from	marine sediment

[Ref.: #67770]	Sample type/isolated from	Tidal flat sediment of Yellow Sea in South Korea
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC017768 (>99% sequence identity) for Ferrimonas gelatinilytica subclade from Microbeatlas

Aquatic Samples	781
Soil Samples	1
Animal Samples	1
Plant Samples
Total Samples	783

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31017]	UNVERIFIED: Ferrimonas gelatinilytica strain CJ24 16S ribosomal RNA gene, partial sequence	KC017768	1492	GenBank	1255257 tax ID

[Ref.: #31017]

GC-content

60.2 mol%

Availability in culture collections External links

[Ref.: #31017]

Culture collection no.

KACC 17065, JCM 18720

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ferrimonas gelatinilytica sp. nov., isolated from tidal flat sediment.	Rahman MM, Cha CJ	Int J Syst Evol Microbiol	10.1099/ijs.0.049866-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31017

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27347 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27347

IJSEM 4309 2013 ( DOI 10.1099/ijs.0.049866-0 , PubMed 23838445 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Ferrimonas gelatinilytica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF