Name: Roseomonas aerophila 7515T-07
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133919

Type strain:

Species: Roseomonas aerophila

Strain Designation: 7515T-07

Culture col. no.: KACC 16529, NBRC 108923

NCBI tax ID(s): 1224513 (species)

Section

Roseomonas aerophila 7515T-07 is an aerobe, spore-forming, Gram-negative bacterium that was isolated from air.

coccus-shaped
Gram-negative
motile
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Roseomonas*
	Species	**Roseomonas aerophila**
	Full Scientific Name (LPSN)	Roseomonas aerophila Kim et al. 2013

Synonym

Pseudoroseomonas aerophila

Information on morphological and physiological properties Morphology

[Ref.: #30873]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.975

[Ref.: #30873]	Cell length	1.2 µm

[Ref.: #30873]	Cell width	1.2 µm

[Ref.: #30873]	Cell shape	coccus-shaped

[Ref.: #30873]	Motility	yes

[Ref.: #30873]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #30873]			growth	04-40 °C
[Ref.: #30873]			optimum	30 °C

[Ref.: #30873]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #30873]			optimum	7
[Ref.: #30873]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30873]

Oxygen tolerance

aerobe

[Ref.: #30873]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	no Confidence in %99
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.965

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30873]		NaCl		growth	0-5	%

	Enzyme	Enzyme activity	EC number
[Ref.: #30873]	acid phosphatase	+	3.1.3.2
[Ref.: #30873]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30873]	catalase	+	1.11.1.6
[Ref.: #30873]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30873]	gelatinase	+
[Ref.: #30873]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30873]	Sample type/isolated from	air
* marker position based on {}

Isolation sources categories

#Environmental

#Air

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX275860 (>99% sequence identity) for Roseomonas aerophila subclade from Microbeatlas

Aquatic Samples	27
Soil Samples	97
Animal Samples	183
Plant Samples	21
Total Samples	328

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30873]	Roseomonas aerophila strain 7515T-07 16S ribosomal RNA gene, partial sequence	JX275860	1426	GenBank	1224513 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoroseomonas aerophila NBRC 108923	GCA_014490485	scaffold	GenBank	1224513 tax ID	*
[Ref.: #66792]	Roseomonas aerophila strain NBRC 108923	1224513.3	wgs	PATRIC	1224513 tax ID	*

[Ref.: #30873]

GC-content

73 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Roseomonas aerophila NBRC 108923 NCBI: GCA_014490485.1
[Ref.: #69481]	spore-forming	no	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Roseomonas aerophila NBRC 108923 NCBI: GCA_014490485.1
[Ref.: #69480]	flagellated	no	87.415	no
[Ref.: #69480]	gram-positive	no	97.461	no
[Ref.: #69480]	anaerobic	no	98.239	yes
[Ref.: #69480]	aerobic	yes	94.414	yes
[Ref.: #69480]	halophile	no	92.018	no
[Ref.: #69480]	spore-forming	no	88.326	yes
[Ref.: #69480]	thermophile	no	98.796	no
[Ref.: #69480]	glucose-util	yes	92.597	no
[Ref.: #69480]	motile	yes	81.87	yes
[Ref.: #69480]	glucose-ferment	no	88.218	no

Availability in culture collections External links

[Ref.: #30873]

Culture collection no.

KACC 16529, NBRC 108923

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas wenyumeiae sp. nov., isolated from faeces of Tibetan antelopes (Pantholops hodgsonii) on the Qinghai-Tibet Plateau.	Tian Z, Lu S, Jin D, Yang J, Pu J, Lai XH, Wang XX, Wu XM, Li J, Wang S, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003479	2019	*
Phylogeny	Roseomonas aerophila sp. nov., isolated from air.	Kim SJ, Weon HY, Ahn JH, Hong SB, Seok SJ, Whang KS, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijs.0.046482-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30873

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27203 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#27203

IJSEM 2334 2013 ( DOI 10.1099/ijs.0.046482-0 , PubMed 23178724 )

* These data were automatically processed and therefore are not curated

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Roseomonas aerophila NBRC 108923

Roseomonas aerophila NBRC 108923

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