Name: Oceanobacillus chungangensis KCTC 33035
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133918

Type strain:

Species: Oceanobacillus chungangensis

Culture col. no.: KCTC 33035, CCUG 62987, CAU 1051

Strain history: <- Wonyong Kim, Chung-Ang Univ.

NCBI tax ID(s): 1229152 (species)

SI-ID 408676

CCUG 62987

Section

Oceanobacillus chungangensis KCTC 33035 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

Gram-positive
motile
rod-shaped
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Oceanobacillus*
	Species	**Oceanobacillus chungangensis**
	Full Scientific Name (LPSN)	Oceanobacillus chungangensis Lee et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30872]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #30872]	Cell length	2.5 µm

[Ref.: #30872]	Cell width	0.6 µm

[Ref.: #30872]	Cell shape	rod-shaped

[Ref.: #30872]	Motility	yes

[Ref.: #62960]

Incubation period

1 day

[Ref.: #30872]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30872]	growth	20-37 °C
[Ref.: #30872]	optimum	30 °C
[Ref.: #62960]	growth	37 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #30872]	Temperature range	mesophilic
[Ref.: #62960]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30872]			optimum	5
[Ref.: #30872]			growth	4.5-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30872]	Oxygen tolerance	aerobe
[Ref.: #62960]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #30872]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30872]		NaCl		growth	0-10	%

[Ref.: #30872]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30872]	esculin ChEBI	+	hydrolysis
[Ref.: #30872]	fructose ChEBI	+	carbon source
[Ref.: #30872]	mannose ChEBI	+	carbon source
[Ref.: #30872]	ribose ChEBI	+	carbon source
[Ref.: #30872]	salicin ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30872]		catalase	+	1.11.1.6
[Ref.: #30872]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30872]	Sample type/isolated from	soil

[Ref.: #62926]	Sample type/isolated from	Soil,sea
[Ref.: #62926]	Sampling date	2010-05-27
[Ref.: #62926]	Geographic location (country and/or sea, region)	Jeju Island
[Ref.: #62926]	Country	Republic of Korea
[Ref.: #62926]	Country ISO 3 Code	KOR
[Ref.: #62926]	Continent	Asia

[Ref.: #62960]	Sample type/isolated from	Soil
[Ref.: #62960]	Sampling date	2010-06-04
[Ref.: #62960]	Geographic location (country and/or sea, region)	Jeju Island
[Ref.: #62960]	Country	Republic of Korea
[Ref.: #62960]	Country ISO 3 Code	KOR
[Ref.: #62960]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	soil
[Ref.: #67771]	Geographic location (country and/or sea, region)	Jeju island
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX233492 (>99% sequence identity) for Oceanobacillus from Microbeatlas

Aquatic Samples	55
Soil Samples	902
Animal Samples	67
Plant Samples	133
Total Samples	1157

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30872]	Oceanobacillus chungangensis strain CAU 1051 from South Korea 16S ribosomal RNA gene, partial sequence	JX233492	1533	GenBank	1229152 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Oceanobacillus chungangensis strain CAU 1051	1229152.3	wgs	PATRIC	1229152 tax ID	*

[Ref.: #30872]

GC-content

36.3 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Oceanobacillus chungangensis strain CAU 1051 PATRIC: 1229152.3
[Ref.: #69480]	motile	yes	89.671	yes
[Ref.: #69480]	gram-positive	yes	89.123	yes
[Ref.: #69480]	anaerobic	no	98.754	yes
[Ref.: #69480]	aerobic	yes	91.238	yes
[Ref.: #69480]	halophile	yes	76.725	no
[Ref.: #69480]	spore-forming	yes	93.371	yes
[Ref.: #69480]	thermophile	no	98.553	yes
[Ref.: #69480]	glucose-util	yes	84.086	no
[Ref.: #69480]	flagellated	yes	86.507	no
[Ref.: #69480]	glucose-ferment	no	88.167	no

Availability in culture collections External links

[Ref.: #30872]

Culture collection no.

KCTC 33035, CCUG 62987, CAU 1051

[Ref.: #91640]

SI-ID 408676

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanobacillus bengalensis sp. nov., a bacterium isolated from seawater of the Bay of Bengal.	Yongchang O, Xiang W, Wang G	Antonie Van Leeuwenhoek	10.1007/s10482-015-0573-5	2015	*
Phylogeny	Oceanobacillus chungangensis sp. nov., isolated from a sand dune.	Lee DC, Kang H, Weerawongwiwat V, Kim B, Choi YW, Kim W	Int J Syst Evol Microbiol	10.1099/ijs.0.046441-0	2013	*
Phylogeny	Oceanobacillus arenosus sp. nov., a moderately halophilic bacterium isolated from marine sand.	Kim W, Siamphan C, Kim JH, Sukhoom A	Int J Syst Evol Microbiol	10.1099/ijs.0.000360	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30872

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27202 (see below)

#62926 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 62987
#62960 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 63270

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#91640

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408676.1 )

#27202

IJSEM 3666 2013 ( DOI 10.1099/ijs.0.046441-0 , PubMed 23625258 )

* These data were automatically processed and therefore are not curated

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Oceanobacillus chungangensis strain CAU 1051

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