Oceanobacillus chungangensis (KCTC 33035, CCUG 62987, CAU 1051)

Name: Oceanobacillus chungangensis (KCTC 33035, CCUG 62987, CAU 1051)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133918

Type strain

Culture col. no. KCTC 33035 CCUG 62987 CAU 1051

NCBI tax ID(s) 1229152

Special Collections CCUG KCTC Literature strains

History KCTC <- Wonyong Kim, Chung-Ang Univ.

Links

Oceanobacillus chungangensis KCTC 33035 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

spore-forming Gram-positive motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 408676

KCTC 33035,CCUG 62987

@ref 20215

Last LPSN update 2026-05-29 08:38:12

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Oceanobacillus

Species Oceanobacillus chungangensis

Full scientific name Oceanobacillus chungangensis Lee et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30872	positive	2.5 µm	0.6 µm	rod-shaped
67771	positive

Colony morphology

62960

Incubation period1 day

Pigmentation

30872

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
30872	positive	growth	20-37
30872	positive	optimum	30
62960	positive	growth	37
67771	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
30872	positive	optimum	5
30872	positive	growth	4.5-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30872	aerobe
62960	aerobe
67771	aerobe
125439	obligate aerobe	96.657

Spore formation

@ref	Spore formation	Confidence
30872
125438		90.204

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30872	NaCl	positive	growth	0-10 %

Observation

30872

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30872	4853 ChEBI	esculin	+	hydrolysis
30872	28757 ChEBI	fructose	+	carbon source
30872	37684 ChEBI	mannose	+	carbon source
30872	33942 ChEBI	ribose	+	carbon source
30872	17814 ChEBI	salicin	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30872	catalase	+	1.11.1.6
30872	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
30872	soil
62926	Soil,sea	2010-05-27	Jeju Island	Republic of Korea	KOR	Asia
62960	Soil	2010-06-04	Jeju Island	Republic of Korea	KOR	Asia
67771	soil		Jeju island	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence JX233492 (>99% sequence identity) for Oceanobacillus from Microbeatlas

Aquatic Samples	55
Soil Samples	902
Animal Samples	67
Plant Samples	133
Total Samples	1157

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM336956v1 assembly for Oceanobacillus chungangensis CAU 1051	scaffold	GCA_003369565	1229152.3	2882391793	1229152	54.75

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30872	Oceanobacillus chungangensis strain CAU 1051 from South Korea 16S ribosomal RNA gene, partial sequence	JX233492	1533		1229152

GC content

30872

GC-content (mol%)36.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM336956v1 assembly for Oceanobacillus chungangensis CAU 1051
NCBI: GCA_003369565

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.66	no
125439	motility	BacteriaNetⓘ	yes	78.87	no
125439	gram_stain	BacteriaNetⓘ	variable	66.77	no
125439	spore_formation	BacteriaNetⓘ	yes	84.07	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Oceanobacillus chungangensis strain CAU 1051
PATRIC: 1229152.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	74.11	no
125438	anaerobic	anaerobicⓘ	no	94.23	yes
125438	spore-forming	spore-formingⓘ	yes	90.20	yes
125438	aerobic	aerobicⓘ	yes	71.21	no
125438	thermophilic	thermophileⓘ	no	93.05	yes
125438	flagellated	motile2+ⓘ	yes	80.92	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanobacillus bengalensis sp. nov., a bacterium isolated from seawater of the Bay of Bengal.	Yongchang O, Xiang W, Wang G	Antonie Van Leeuwenhoek	10.1007/s10482-015-0573-5	2015
Phylogeny	Oceanobacillus chungangensis sp. nov., isolated from a sand dune.	Lee DC, Kang H, Weerawongwiwat V, Kim B, Choi YW, Kim W	Int J Syst Evol Microbiol	10.1099/ijs.0.046441-0	2013
Phylogeny	Oceanobacillus arenosus sp. nov., a moderately halophilic bacterium isolated from marine sand.	Kim W, Siamphan C, Kim JH, Sukhoom A	Int J Syst Evol Microbiol	10.1099/ijs.0.000360	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27202	IJSEM 3666 2013 ( DOI 10.1099/ijs.0.046441-0 , PubMed 23625258 )
#30872	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27202
#62926	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 62987
#62960	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 63270
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Oceanobacillus chungangensis (KCTC 33035, CCUG 62987, CAU 1051)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003369565

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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