Flavobacterium nitratireducens (MTCC 11155, JCM 17678, N1)

Name: Flavobacterium nitratireducens (MTCC 11155, JCM 17678, N1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133920

Type strain

Strain Designation N1

Culture col. no. MTCC 11155 JCM 17678 N1

NCBI tax ID(s) 992289

Special Collections JCM Literature strains

History P. Anil Kumar N1.

Links

Flavobacterium nitratireducens N1 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from seawater.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 272865

LMG 27772,MTCC 11155,JCM 17678

@ref 20215

Last LPSN update 2026-02-09 11:32:04

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flavobacterium

Species Flavobacterium nitratireducens

Full scientific name Flavobacterium nitratireducens Nupur et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30874	negative	1.25 µm	0.25 µm	rod-shaped

Pigmentation

30874

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
30874	positive	growth	15-37
30874	positive	optimum	33.5
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
30874	positive	optimum	8
30874	positive	growth	07-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

30874

Oxygen toleranceaerobe

Spore formation

@ref	Spore formation	Confidence
125438		92.85

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30874	NaCl	positive	growth	0-1 %

Observation

30874

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30874	17234 ChEBI	glucose	+	carbon source
30874	17306 ChEBI	maltose	+	carbon source
30874	37684 ChEBI	mannose	+	carbon source
30874	17632 ChEBI	nitrate	+	reduction
30874	17992 ChEBI	sucrose	+	carbon source
30874	27082 ChEBI	trehalose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30874	acid phosphatase	+	3.1.3.2
30874	alpha-galactosidase	+	3.2.1.22
30874	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
30874	seawater
67770	Marine water from the sea shore	Bay of Bengal, Visakhapatnam	India	IND	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2962533v1 assembly for Flavobacterium nitratireducens JCM 17678	complete	GCA_029625335	992289.3	8058113502	992289	91.5

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30874	Flavobacterium nitratireducens partial 16S rRNA gene, type strain N1T	FR827898	1371		992289

GC content

30874

GC-content (mol%)36.3

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Flavobacterium nitratireducens JCM 17678
NCBI: GCA_029625335.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	87.97	yes
125438	anaerobic	anaerobicⓘ	no	78.20	yes
125438	aerobic	aerobicⓘ	yes	59.81	yes
125438	spore-forming	spore-formingⓘ	no	92.85	no
125438	thermophilic	thermophileⓘ	no	95.48	yes
125438	flagellated	motile2+ⓘ	no	84.77	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Non-contiguous finished genome sequence and description of the gliding bacterium Flavobacterium seoulense sp. nov.	Shin SK, Goo H, Cho YJ, Kwon S, Yong D, Yi H.	Stand Genomic Sci	10.1186/1944-3277-9-34	2014
Phylogeny	Flavobacterium nitratireducens sp. nov., an amylolytic bacterium of the family Flavobacteriaceae isolated from coastal surface seawater.	Nupur, Bhumika V, Srinivas TNR, Kumar PA	Int J Syst Evol Microbiol	10.1099/ijs.0.046524-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27204	IJSEM 2490 2013 ( DOI 10.1099/ijs.0.046524-0 , PubMed 23825376 )
#30874	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27204
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Flavobacterium nitratireducens (MTCC 11155, JCM 17678, N1)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_029625335

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media