Olivibacter jilunii (KCTC 23098, CCTCC AB 2010105, 14-2A)

Name: Olivibacter jilunii (KCTC 23098, CCTCC AB 2010105, 14-2A)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133862

Type strain

Strain Designation 14-2A

Culture col. no. KCTC 23098 CCTCC AB 2010105 14-2A

NCBI tax ID(s) 985016

Special Collections KCTC Literature strains

History <- G Wang, Nanjing Agi. Univ., China

Links

Olivibacter jilunii 14-2A is an aerobe, Gram-negative, rod-shaped prokaryote that was isolated from From long-term DDT-contaminated soil, DDT production plant.

Gram-negative rod-shaped aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 27228

KCTC 23098

@ref 20215

Last LPSN update 2025-12-16 10:01:54

Domain Pseudomonadati

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Olivibacter

Species Olivibacter jilunii

Full scientific name Olivibacter jilunii Chen et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
30701	negative	1.3 µm	0.55 µm	rod-shaped
67771				rod-shaped
67771	negative

Pigmentation

30701

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
30701	positive	growth	04-42
30701	positive	optimum	29	mesophilic
67771	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
30701	positive	optimum	7.25
30701	positive	growth	06-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
30701	aerobe
67771	aerobe

Spore formation

@ref	Spore formation
30701
67771

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30701	NaCl	positive	growth	0-5 %

Observation

@ref	Observation
30701	aggregates in clumps
67771	quinones: MK-7, MK-8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30701	30089 ChEBI	acetate	+	carbon source
30701	22599 ChEBI	arabinose	+	carbon source
30701	24265 ChEBI	gluconate	+	carbon source
30701	17234 ChEBI	glucose	+	carbon source
30701	24996 ChEBI	lactate	+	carbon source
30701	15792 ChEBI	malonate	+	carbon source
30701	17306 ChEBI	maltose	+	carbon source
30701	29864 ChEBI	mannitol	+	carbon source
30701	28053 ChEBI	melibiose	+	carbon source
30701	506227 ChEBI	N-acetylglucosamine	+	carbon source
30701	17632 ChEBI	nitrate	+	reduction
30701	26546 ChEBI	rhamnose	+	carbon source
30701	33942 ChEBI	ribose	+	carbon source
30701	17814 ChEBI	salicin	+	carbon source
30701	17822 ChEBI	serine	+	carbon source
30701	17992 ChEBI	sucrose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30701	acid phosphatase	+	3.1.3.2
30701	alkaline phosphatase	+	3.1.3.1
30701	alpha-galactosidase	+	3.2.1.22
30701	catalase	+	1.11.1.6
30701	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67771	From long-term DDT-contaminated soil, DDT production plant	Jiangsu province	China	CHN	Asia
30701	soil

Taxonmaps

69479

Global distribution of 16S sequence HQ848949 (>99% sequence identity) for Sphingobacteriaceae from Microbeatlas

Aquatic Samples	147
Soil Samples	160
Animal Samples	660
Plant Samples	113
Total Samples	1080

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4268600v1 assembly for Olivibacter jilunii KCTC 23098	scaffold	GCA_042686005	985016	65.64

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30701	Olivibacter jilunii strain 14-2A 16S ribosomal RNA gene, partial sequence	HQ848949	1481		985016

GC content

30701

GC-content (mol%)41.2

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Olivibacter ginsenosidimutans sp nov., with ginsenoside converting activity isolated from compost, and reclassification of Pseudosphingobacterium domesticum as Olivibacter domesticus comb. nov.	Siddiqi MZ, Liu Q, Lee SY, Choi KD, Im WT	Int J Syst Evol Microbiol	10.1099/ijsem.0.002819	2018
Phylogeny	Olivibacter jilunii sp. nov., isolated from DDT-contaminated soil.	Chen K, Tang SK, Wang GL, Nie GX, Li QF, Zhang JD, Li WJ, Li SP	Int J Syst Evol Microbiol	10.1099/ijs.0.042416-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27032	IJSEM 1083 2013 ( DOI 10.1099/ijs.0.042416-0 , PubMed 22707536 )
#30701	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27032
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Olivibacter jilunii (KCTC 23098, CCTCC AB 2010105, 14-2A)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_042686005

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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