Name: Olivibacter jilunii 14-2A
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133862

Type strain:

Species: Olivibacter jilunii

Strain Designation: 14-2A

Culture col. no.: KCTC 23098, CCTCC AB 2010105

Strain history: <- G Wang, Nanjing Agi. Univ., China

NCBI tax ID(s): 985016 (species)

Section

Olivibacter jilunii 14-2A is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from From long-term DDT-contaminated soil, DDT production plant.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Olivibacter*
	Species	**Olivibacter jilunii**
	Full Scientific Name (LPSN)	Olivibacter jilunii Chen et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30701]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #30701]	Cell length	1.3 µm

[Ref.: #30701]	Cell width	0.55 µm

[Ref.: #30701]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #30701]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #30701]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30701]	growth	04-42 °C
[Ref.: #30701]	optimum	29 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #30701]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30701]			optimum	7.25
[Ref.: #30701]			growth	06-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30701]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #30701]	Ability of spore formation	no
[Ref.: #67771]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30701]		NaCl		growth	0-5	%

[Ref.: #30701]	Observation	aggregates in clumps
[Ref.: #67771]	Observation	quinones: MK-7, MK-8

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30701]	acetate ChEBI	+	carbon source
[Ref.: #30701]	arabinose ChEBI	+	carbon source
[Ref.: #30701]	gluconate ChEBI	+	carbon source
[Ref.: #30701]	glucose ChEBI	+	carbon source
[Ref.: #30701]	lactate ChEBI	+	carbon source
[Ref.: #30701]	malonate ChEBI	+	carbon source
[Ref.: #30701]	maltose ChEBI	+	carbon source
[Ref.: #30701]	mannitol ChEBI	+	carbon source
[Ref.: #30701]	melibiose ChEBI	+	carbon source
[Ref.: #30701]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #30701]	nitrate ChEBI	+	reduction
[Ref.: #30701]	rhamnose ChEBI	+	carbon source
[Ref.: #30701]	ribose ChEBI	+	carbon source
[Ref.: #30701]	salicin ChEBI	+	carbon source
[Ref.: #30701]	serine ChEBI	+	carbon source
[Ref.: #30701]	sucrose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #30701]	acid phosphatase	+	3.1.3.2
[Ref.: #30701]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30701]	alpha-galactosidase	+	3.2.1.22
[Ref.: #30701]	catalase	+	1.11.1.6
[Ref.: #30701]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67771]	Sample type/isolated from	From long-term DDT-contaminated soil, DDT production plant
[Ref.: #67771]	Geographic location (country and/or sea, region)	Jiangsu province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia

[Ref.: #30701]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ848949 (>99% sequence identity) for Sphingobacteriaceae from Microbeatlas

Aquatic Samples	147
Soil Samples	160
Animal Samples	660
Plant Samples	113
Total Samples	1080

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30701]	Olivibacter jilunii strain 14-2A 16S ribosomal RNA gene, partial sequence	HQ848949	1481	GenBank	985016 tax ID

[Ref.: #30701]

GC-content

41.2 mol%

Availability in culture collections External links

[Ref.: #30701]

Culture collection no.

KCTC 23098, CCTCC AB 2010105

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Olivibacter ginsenosidimutans sp nov., with ginsenoside converting activity isolated from compost, and reclassification of Pseudosphingobacterium domesticum as Olivibacter domesticus comb. nov.	Siddiqi MZ, Liu Q, Lee SY, Choi KD, Im WT	Int J Syst Evol Microbiol	10.1099/ijsem.0.002819	2018	*
Phylogeny	Olivibacter jilunii sp. nov., isolated from DDT-contaminated soil.	Chen K, Tang SK, Wang GL, Nie GX, Li QF, Zhang JD, Li WJ, Li SP	Int J Syst Evol Microbiol	10.1099/ijs.0.042416-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30701

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27032 (see below)

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27032

IJSEM 1083 2013 ( DOI 10.1099/ijs.0.042416-0 , PubMed 22707536 )

* These data were automatically processed and therefore are not curated

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