Name: Hyunsoonleella aestuarii KYW371
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133861

Type strain:

Species: Hyunsoonleella aestuarii

Strain Designation: KYW371

Culture col. no.: KCTC 23449, JCM 17452

Strain history: <- CN Seong, Sunchon Natl. Univ., Korea

NCBI tax ID(s): 912802 (species)

Section

Hyunsoonleella aestuarii KYW371 is an aerobe, Gram-negative, motile bacterium that was isolated from seawater.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Hyunsoonleella*
	Species	**Hyunsoonleella aestuarii**
	Full Scientific Name (LPSN)	Hyunsoonleella aestuarii (Park et al. 2013) Li et al. 2022

	Synonym	Algibacter aestuarii
	Synonym	Marinivirga aestuarii

Information on morphological and physiological properties Morphology

[Ref.: #30699]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.975

[Ref.: #30699]	Cell length	1.4 µm

[Ref.: #30699]	Cell width	0.35 µm

[Ref.: #30699]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #30699]	Motility	yes
[Ref.: #67771]	Motility	no

[Ref.: #30699]	Flagellum arrangement	gliding

[Ref.: #30699]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30699]	growth	10-30 °C
[Ref.: #30699]	optimum	25 °C
[Ref.: #67770]	growth	25 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #30699]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30699]			optimum	7
[Ref.: #30699]			growth	06-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30699]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #30699]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30699]		NaCl		growth	01-07	%
[Ref.: #30699]		NaCl		optimum	2	%

[Ref.: #30699]	Observation	aggregates in clumps
[Ref.: #67770]	Observation	quinones: MK-6
[Ref.: #67771]	Observation	quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30699]	alanine ChEBI	+	carbon source
[Ref.: #30699]	dextrin ChEBI	+	carbon source
[Ref.: #30699]	esculin ChEBI	+	hydrolysis
[Ref.: #30699]	glucose ChEBI	+	carbon source
[Ref.: #30699]	maltose ChEBI	+	carbon source
[Ref.: #30699]	methyl pyruvate ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30699]	acid phosphatase	+	3.1.3.2
[Ref.: #30699]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30699]	catalase	+	1.11.1.6
[Ref.: #30699]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30699]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30699]	Sample type/isolated from	seawater

[Ref.: #67770]	Sample type/isolated from	Seawater,(34° 51' N 127° 47' E)
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
[Ref.: #67770]	Geographic location	34.8500°/127.7830°

[Ref.: #67771]	Sample type/isolated from	From seawater
[Ref.: #67771]	Geographic location (country and/or sea, region)	Gwangyang Bay
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
[Ref.: #67771]	Geographic location	34.8500°/127.7830°
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ405792 (>99% sequence identity) for Algibacter aestuarii subclade from Microbeatlas

Aquatic Samples	676
Soil Samples	8
Animal Samples	5
Plant Samples	7
Total Samples	696

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30699]	Marinivirga aestuarii strain KYW371 16S ribosomal RNA gene, partial sequence	HQ405792	1482	GenBank	912802 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Hyunsoonleella aestuarii KCTC 23449	GCA_006148925	scaffold	GenBank	912802 tax ID
[Ref.: #66792]	Algibacter aestuarii strain KCTC 23449	912802.3	wgs	PATRIC	912802 tax ID	*

[Ref.: #30699]	GC-content	36.6 mol%
[Ref.: #67770]	GC-content	36.6 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Algibacter aestuarii KCTC 23449 NCBI: GCA_006148925.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Algibacter aestuarii strain KCTC 23449 PATRIC: 912802.3
[Ref.: #69480]	motile	no	91.723	yes
[Ref.: #69480]	flagellated	no	95.276	yes
[Ref.: #69480]	gram-positive	no	98.148	yes
[Ref.: #69480]	anaerobic	no	98.766	yes
[Ref.: #69480]	halophile	no	85.898	no
[Ref.: #69480]	spore-forming	no	97.457	yes
[Ref.: #69480]	thermophile	no	98.145	no
[Ref.: #69480]	glucose-util	yes	86.604	no
[Ref.: #69480]	aerobic	yes	82.948	yes
[Ref.: #69480]	glucose-ferment	no	89.817	no

Availability in culture collections External links

[Ref.: #30699]

Culture collection no.

KCTC 23449, JCM 17452

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinivirga aestuarii gen. nov., sp. nov., a member of the family Flavobacteriaceae, isolated from marine environments, and emended descriptions of the genera Hyunsoonleella, Jejuia and Pontirhabdus and the species Hyunsoonleella jejuensis, Jejuia pallidilutea and Pontirhabdus pectinivorans.	Park SC, Choe HN, Hwang YM, Baik KS, Kim SN, Lee YS, Jung JS, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.042341-0	2012	*
Phylogeny	Algibacter onchidii sp. nov., a symbiotic bacterium isolated from a marine invertebrate.	Yin Q, Liang J, Zheng X, Wang Y, Song ZM, Zhang Y, Xu Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.005102	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30699

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27030 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#27030

IJSEM 1524 2013 ( DOI 10.1099/ijs.0.042341-0 , PubMed 22888187 )

* These data were automatically processed and therefore are not curated

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Algibacter aestuarii KCTC 23449

Algibacter aestuarii strain KCTC 23449

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