Name: Muricauda beolgyonensis BB-My12
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133724

Type strain:

Species: Muricauda beolgyonensis

Strain Designation: BB-My12

Culture col. no.: KCTC 23501, CCUG 60800

Strain history: <- JH Yoon, KRIBB

NCBI tax ID(s): 864064 (species)

SI-ID 412246

CCUG 60800

Section

Muricauda beolgyonensis BB-My12 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from marine sediment.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	Muricauda
	Species	Muricauda beolgyonensis
	Full Scientific Name (LPSN)	Muricauda beolgyonensis Lee et al. 2012

Synonym

Allomuricauda beolgyonensis

Information on morphological and physiological properties Morphology

[Ref.: #30288]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.989

[Ref.: #30288]	Cell length	3.5 µm

[Ref.: #30288]	Cell width	0.6 µm

[Ref.: #30288]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #30288]	Motility	no

[Ref.: #62443]

Incubation period

1-2 days

[Ref.: #30288]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30288]	growth	10-40 °C
[Ref.: #30288]	optimum	37 °C
[Ref.: #62443]	growth	30 °C
[Ref.: #67771]	growth	37 °C

[Ref.: #30288]	Temperature range	mesophilic
[Ref.: #62443]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30288]			optimum	7.25
[Ref.: #30288]			growth	5.5-7.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30288]	Oxygen tolerance	aerobe
[Ref.: #62443]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #30288]	Ability of spore formation	no
[Ref.: #67771]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30288]		NaCl		growth	0.5-8	%
[Ref.: #30288]		NaCl		optimum	2.50	%

[Ref.: #67771]

Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30288]	cellobiose ChEBI	+	carbon source
[Ref.: #30288]	fructose ChEBI	+	carbon source
[Ref.: #30288]	glucose ChEBI	+	carbon source
[Ref.: #30288]	maltose ChEBI	+	carbon source
[Ref.: #30288]	mannose ChEBI	+	carbon source
[Ref.: #30288]	salicin ChEBI	+	carbon source
[Ref.: #30288]	succinate ChEBI	+	carbon source
[Ref.: #30288]	sucrose ChEBI	+	carbon source
[Ref.: #30288]	trehalose ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30288]		catalase	+	1.11.1.6
[Ref.: #30288]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30288]	Sample type/isolated from	marine sediment

[Ref.: #62443]	Sample type/isolated from	Tidal flat sediment
[Ref.: #62443]	Sampling date	2009
[Ref.: #62443]	Geographic location (country and/or sea, region)	Beolgyo
[Ref.: #62443]	Country	Republic of Korea
[Ref.: #62443]	Country ISO 3 Code	KOR
[Ref.: #62443]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From tidal flat sediment
[Ref.: #67771]	Geographic location (country and/or sea, region)	Boseong
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM355805 (>99% sequence identity) for Muricauda beolgyonensis subclade from Microbeatlas

Aquatic Samples	160
Soil Samples	4
Animal Samples	5
Plant Samples	2
Total Samples	171

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30288]	Muricauda beolgyonensis strain BB-My12 16S ribosomal RNA gene, partial sequence	HM355805	1449	GenBank	864064 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Allomuricauda beolgyonensis KCTC 23501	GCA_003992615	scaffold	GenBank	864064 tax ID	*
[Ref.: #66792]	Muricauda beolgyonensis strain KCTC 23501	864064.3	wgs	PATRIC	864064 tax ID	*
[Ref.: #66792]	Muricauda beolgyonensis KCTC 23501	2894668856	draft	JGI IMG/M	864064 tax ID	*

[Ref.: #30288]	GC-content	45 mol%
[Ref.: #67771]	GC-content	45.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Muricauda beolgyonensis KCTC 23501 NCBI: GCA_003992615.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Muricauda beolgyonensis KCTC 23501 NCBI: GCA_003992615.1
[Ref.: #69480]	motile	no	91.484	yes
[Ref.: #69480]	flagellated	no	95.644	no
[Ref.: #69480]	gram-positive	no	98.86	no
[Ref.: #69480]	anaerobic	no	98.305	yes
[Ref.: #69480]	aerobic	yes	80.4	yes
[Ref.: #69480]	halophile	no	87.209	no
[Ref.: #69480]	spore-forming	no	96.925	yes
[Ref.: #69480]	thermophile	no	98.151	no
[Ref.: #69480]	glucose-util	yes	85.409	no
[Ref.: #69480]	glucose-ferment	no	89.124	no

Availability in culture collections External links

[Ref.: #30288]

Culture collection no.

KCTC 23501, CCUG 60800

[Ref.: #91572]

SI-ID 412246

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Muricauda maritima sp. nov., Muricauda aequoris sp. nov. and Muricauda oceanensis sp. nov., three marine bacteria isolated from seawater.	Guo LL, Wu D, Sun C, Cheng H, Xu XW, Wu M, Wu YH	Int J Syst Evol Microbiol	10.1099/ijsem.0.004522	2020	*
Phylogeny	Muricauda alvinocaridis sp. nov., isolated from shrimp gill from the Okinawa Trough.	Liu L, Yu M, Zhou S, Fu T, Sun W, Wang L, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijsem.0.003953	2020	*
Phylogeny	Muricauda taeanensis sp. nov., isolated from a marine tidal flat.	Kim JM, Jin HM, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.047647-0	2013	*
Phylogeny	Muricauda beolgyonensis sp. nov., isolated from a tidal flat.	Lee SY, Park S, Oh TK, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijs.0.032581-0	2011	*
Phylogeny	Muricauda sediminis sp. nov., isolated from western Pacific Ocean sediment.	Zhu S, Xue Z, Huang Y, Chen X, Ren N, Chen T, Chen Y, Yang J, Chen J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004757	2021	*
Phylogeny	Muricauda ochracea sp. nov., isolated from a tidal flat in the Republic of Korea.	Kim D, Yoo Y, Khim JS, Yang D, Pathiraja D, Choi IG, Kim JJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.004312	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30288

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26629 (see below)

#62443 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 60800

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#91572

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID412246.1 )

#26629

IJSEM 1134 2012 ( DOI 10.1099/ijs.0.032581-0 , PubMed 21724956 )

* These data were automatically processed and therefore are not curated

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Muricauda beolgyonensis KCTC 23501

Muricauda beolgyonensis KCTC 23501

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