Gaetbulibacter aestuarii (KCTC 23303, JCM 17455, KYW382)

Name: Gaetbulibacter aestuarii (KCTC 23303, JCM 17455, KYW382)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133673

Type strain

Strain Designation KYW382

Culture col. no. KCTC 23303 JCM 17455 KYW382

NCBI tax ID(s) 1502358

Special Collections JCM KCTC Literature strains

History C. N. Seong KYW382. <- CN Seong, Sunchon Natl. Univ.

Links

Gaetbulibacter aestuarii KYW382 is an aerobe, Gram-negative, rod-shaped prokaryote that was isolated from seawater.

Gram-negative rod-shaped aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 25053

KCTC 23303,JCM 17455

@ref 20215

Last LPSN update 2026-02-09 11:32:00

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Gaetbulibacter

Species Gaetbulibacter aestuarii

Full scientific name Gaetbulibacter aestuarii Park et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
30061	negative	1.5-4.0 µm	0.3 µm	rod-shaped
67771				rod-shaped
67771	negative

Pigmentation

30061

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
30061	positive	growth	10-40
30061	positive	optimum	25-35	mesophilic
67770	positive	growth	30	mesophilic
67771	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH
30061	positive	optimum	7
30061	positive	growth	5.0-8.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
30061	aerobe
67771	aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30061	NaCl	positive	growth	1-9 %
30061	NaCl	positive	optimum	2-3 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30061	18240 ChEBI	4-hydroxy-L-proline	+	carbon source
30061	22653 ChEBI	asparagine	+	carbon source
30061	35391 ChEBI	aspartate	+	carbon source
30061	17057 ChEBI	cellobiose	+	carbon source
30061	23652 ChEBI	dextrin	+	carbon source
30061	4853 ChEBI	esculin	+	hydrolysis
30061	28757 ChEBI	fructose	+	carbon source
30061	28260 ChEBI	galactose	+	carbon source
30061	17234 ChEBI	glucose	+	carbon source
30061	29987 ChEBI	glutamate	+	carbon source
30061	17716 ChEBI	lactose	+	carbon source
30061	17306 ChEBI	maltose	+	carbon source
30061	37684 ChEBI	mannose	+	carbon source
30061	28053 ChEBI	melibiose	+	carbon source
30061	37657 ChEBI	methyl D-glucoside	+	carbon source
30061	18257 ChEBI	ornithine	+	carbon source
30061	26271 ChEBI	proline	+	carbon source
30061	16634 ChEBI	raffinose	+	carbon source
30061	26546 ChEBI	rhamnose	+	carbon source
30061	17992 ChEBI	sucrose	+	carbon source
30061	26986 ChEBI	threonine	+	carbon source
30061	27082 ChEBI	trehalose	+	carbon source
30061	53424 ChEBI	tween 20	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30061	catalase	+	1.11.1.6
30061	cytochrome oxidase	+	1.9.3.1
30061	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
30061	seawater
67770	Seawater		Republic of Korea	KOR	Asia
67771	From seawater	the shallow coastal region of Gwangyang Bay, South Sea	Republic of Korea	KOR	Asia	34.9	128.717 34.9/128.717

Taxonmaps

69479

Global distribution of 16S sequence GU552681 (>99% sequence identity) for Gaetbulibacter aestuarii subclade from Microbeatlas

Aquatic Samples	90
Soil Samples	9
Animal Samples
Plant Samples	16
Total Samples	115

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953766v1 assembly for Gaetbulibacter aestuarii JCM 17455	contig	GCA_039537665	1502358	78

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30061	Gaetbulibacter aestuarii strain KYW382 16S ribosomal RNA gene, partial sequence	GU552681	1458		1502358

GC content

@ref	GC-content (mol%)	Method
30061	32.4
67770	32.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Gaetbulibacter aquiaggeris sp. nov., a member of the Flavobacteriaceae isolated from seawater.	Jung YT, Lee JS, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000845	2015
Phylogeny	Gaetbulibacter lutimaris sp. nov., isolated from a tidal flat sediment.	Yoon JH, Lee SY, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.040352-0	2012
Phylogeny	Gaetbulibacter aestuarii sp. nov., isolated from shallow coastal seawater, and emended description of the genus Gaetbulibacter.	Park SC, Choe HN, Baik KS, Lee KH, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.028944-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26421	IJSEM 150 2012 ( DOI 10.1099/ijs.0.028944-0 , PubMed 21357459 )
#30061	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26421
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Gaetbulibacter aestuarii (KCTC 23303, JCM 17455, KYW382)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_039537665

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media