Name: Chryseobacterium anthropi NF 1366
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133494

Type strain:

Species: Chryseobacterium anthropi

Strain Designation: NF 1366

Culture col. no.: CCUG 52764, CIP 109762

Strain history: CIP <- 2007, G. Wauters, Leuven Univ., Brussels, Belgium: strain NF 1366

NCBI tax ID(s): 520603 (species)

SI-ID 364121

CCUG 52764, CIP 109762

Other strains from Chryseobacterium anthropi

C. anthropi CCUG 15260, LMG 8325
C. anthropi CCUG 15624
C. anthropi CCUG 34312
C. anthropi CCUG 52760
C. anthropi CCUG 52762
C. anthropi CCUG 52763
C. anthropi CCUG 60562, NCTC 13528

Section

Chryseobacterium anthropi NF 1366 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from Human blood,78-yr-old man,Candida endocarditis.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Chryseobacterium*
	Species	**Chryseobacterium anthropi**
	Full Scientific Name (LPSN)	Chryseobacterium anthropi Kämpfer et al. 2009

Synonym

Kaistella anthropi

Information on morphological and physiological properties Morphology

[Ref.: #29189]	Gram stain	negative
[Ref.: #116411]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.997

[Ref.: #29189]	Cell length	3 µm

[Ref.: #29189]	Cell width	0.75 µm

[Ref.: #29189]	Cell shape	rod-shaped
[Ref.: #116411]	Cell shape	rod-shaped

[Ref.: #29189]	Motility	no
[Ref.: #116411]	Motility	no

[Ref.: #29189]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #34707]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #34707]

Culture medium growth

[Ref.: #34707]

Culture medium composition

expand / minimize

[Ref.: #116411]

Culture medium

CIP Medium 72

[Ref.: #116411]

Culture medium growth

[Ref.: #116411]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #29189]	growth	20-37 °C
[Ref.: #29189]	optimum	30 °C
[Ref.: #34707]	growth	30 °C
[Ref.: #59664]	growth	37 °C

[Ref.: #29189]	Temperature range	mesophilic
[Ref.: #34707]	Temperature range	mesophilic
[Ref.: #59664]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29189]	Oxygen tolerance	aerobe
[Ref.: #59664]	Oxygen tolerance	aerobe
[Ref.: #116411]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.993

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29189]		NaCl		growth	<3	%

[Ref.: #29189]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29189]	acetate ChEBI	+	carbon source
[Ref.: #29189]	glucose ChEBI	+	carbon source
[Ref.: #29189]	maltose ChEBI	+	carbon source
[Ref.: #29189]	mannose ChEBI	+	carbon source
[Ref.: #116411]	nitrate ChEBI	-	reduction
[Ref.: #116411]	nitrite ChEBI	-	reduction
[Ref.: #29189]	tween 80 ChEBI	+	carbon source

	Metabolite production	Metabolite	Production
[Ref.: #29189]		indole ChEBI	yes
[Ref.: #116411]		indole ChEBI	yes

	Physiological tests	Metabolite	Indole test
[Ref.: #29189]		indole ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #29189]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #29189]	catalase	+	1.11.1.6
[Ref.: #116411]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #29189]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #29189]	gelatinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116411]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #116411]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116411]	12095	-	+	+	+	-	+	+	+	+	+	+	+	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #59664]	Sample type/isolated from	Human blood,78-yr-old man,Candida endocarditis
[Ref.: #59664]	Sampling date	2006-02-16
[Ref.: #59664]	Geographic location (country and/or sea, region)	Brussels
[Ref.: #59664]	Country	Belgium
[Ref.: #59664]	Country ISO 3 Code	BEL
[Ref.: #59664]	Continent	Europe

[Ref.: #116411]	Sample type/isolated from	Blood culture
[Ref.: #116411]	Geographic location (country and/or sea, region)	Brussels
[Ref.: #116411]	Country	Belgium
[Ref.: #116411]	Country ISO 3 Code	BEL
[Ref.: #116411]	Continent	Europe
[Ref.: #116411]	Isolation date	2006
* marker position based on {}

Isolation sources categories

#Host Body Product	#Fluids	#Blood
#Host Body-Site	#Organ	#Heart
#Host	#Human	#Male
#Host	#Fungi	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM982786 (>99% sequence identity) for Weeksellaceae from Microbeatlas

Aquatic Samples	207
Soil Samples	137
Animal Samples	578
Plant Samples	31
Total Samples	953

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #116411]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29189]	Chryseobacterium anthropi partial 16S rRNA gene, type strain NF 1366T	AM982786	1456	GenBank	520603 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Kaistella anthropi CCUG 52764	GCA_020480345	contig	GenBank	520603 tax ID	*

[Ref.: #29189]

GC-content

39 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Kaistella anthropi CCUG 52764 NCBI: GCA_020480345.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Kaistella anthropi CCUG 52764 NCBI: GCA_020480345.1
[Ref.: #69480]	flagellated	no	96.459	yes
[Ref.: #69480]	gram-positive	no	98.034	yes
[Ref.: #69480]	anaerobic	no	99.046	no
[Ref.: #69480]	aerobic	yes	88.821	yes
[Ref.: #69480]	halophile	no	90.523	no
[Ref.: #69480]	spore-forming	no	97.382	no
[Ref.: #69480]	motile	no	91.117	yes
[Ref.: #69480]	thermophile	no	99.292	yes
[Ref.: #69480]	glucose-util	yes	87.013	yes
[Ref.: #69480]	glucose-ferment	no	91.189	no

Availability in culture collections External links

[Ref.: #29189]

Culture collection no.

CCUG 52764, CIP 109762

[Ref.: #91468]

SI-ID 364121

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Chryseobacterium faecale sp. nov., isolated from camel feces.	Son Y, Min J, Park W	Int J Syst Evol Microbiol	10.1099/ijsem.0.005405	2022	*
Phylogeny	Chryseobacterium montanum sp. nov. isolated from mountain soil.	Guo W, Li J, Shi M, Yuan K, Li N, Wang G	Int J Syst Evol Microbiol	10.1099/ijsem.0.001309	2016	*
Phylogeny	Description of Chryseobacterium anthropi sp. nov. to accommodate clinical isolates biochemically similar to Kaistella koreensis and Chryseobacterium haifense, proposal to reclassify Kaistella koreensis as Chryseobacterium koreense comb. nov. and emended description of the genus Chryseobacterium.	Kampfer P, Vaneechoutte M, Lodders N, De Baere T, Avesani V, Janssens M, Busse HJ, Wauters G	Int J Syst Evol Microbiol	10.1099/ijs.0.008250-0	2009	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29189

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25613 (see below)

#34707 ; Curators of the CIP;
#59664 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 52764

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#91468

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID364121.1 )

#116411 Collection of Institut Pasteur ; Curators of the CIP; CIP 109762

#25613

IJSEM 2421 2009 ( DOI 10.1099/ijs.0.008250-0 , PubMed 19622666 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Chryseobacterium anthropi in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Kaistella anthropi CCUG 52764

Kaistella anthropi CCUG 52764

Change proposal

Change proposal