Shewanella vesiculosa (LMG 244245, CECT 7339, M7)

Name: Shewanella vesiculosa (LMG 244245, CECT 7339, M7)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133424

Type strain

Strain Designation M7

Culture col. no. LMG 244245 CECT 7339 M7

NCBI tax ID(s) 518738

Special Collections Literature strains

Links

Shewanella vesiculosa M7 is a facultative anaerobe, Gram-negative, motile bacterium that was isolated from marine sediment.

Gram-negative motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 323228

LMG 24424,CECT 7339

@ref 20215

Last LPSN update 2026-05-29 08:38:05

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Shewanellaceae

Genus Shewanella

Species Shewanella vesiculosa

Full scientific name Shewanella vesiculosa Bozal et al. 2009

BacDive ID	Other strains from **Shewanella vesiculosa** (1)	Type strain
164507	S. vesiculosa JCM 33296

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Confidence
28894	negative	2.25 µm	0.5 µm	rod-shaped
125438	negative					98.5

Pigmentation

28894

Productionno

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
28894	positive	optimum	17.5

Culture pH

@ref	Ability	Type	PH	PH range
28894	positive	optimum	7.5
28894	positive	growth	6.0-8.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

28894

Oxygen tolerancefacultative anaerobe

Spore formation

28894

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
28894	NaCl	positive	growth	<7 %
28894	NaCl	positive	optimum	2 %

Observation

28894

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
28894	17057 ChEBI	cellobiose	+	carbon source
28894	4853 ChEBI	esculin	+	hydrolysis
28894	28260 ChEBI	galactose	+	carbon source
28894	17234 ChEBI	glucose	+	carbon source
28894	25115 ChEBI	malate	+	carbon source
28894	17306 ChEBI	maltose	+	carbon source
28894	29864 ChEBI	mannitol	+	carbon source
28894	28053 ChEBI	melibiose	+	carbon source
28894	17992 ChEBI	sucrose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
28894	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
28894	alkaline phosphatase	+	3.1.3.1
28894	catalase	+	1.11.1.6
28894	cytochrome oxidase	+	1.9.3.1
28894	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

28894

Sample typemarine sediment

Taxonmaps

69479

Global distribution of 16S sequence AM980877 (>99% sequence identity) for Shewanella from Microbeatlas

Aquatic Samples	8506
Soil Samples	472
Animal Samples	2645
Plant Samples	90
Total Samples	11713

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM2156001v1 assembly for Shewanella vesiculosa M7	complete	GCA_021560015	518738.22	518738	63.68

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
28894	Shewanella vesiculosa partial 16S rRNA gene, type strain M7T	AM980877	1495		518738

GC content

28894

GC-content (mol%)42

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Shewanella vesiculosa M7
NCBI: GCA_021560015.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	yes
125438	anaerobic	anaerobicⓘ	no	92.92	yes
125438	aerobic	aerobicⓘ	no	51.81	yes
125438	spore-forming	spore-formingⓘ	no	89.84	yes
125438	thermophilic	thermophileⓘ	no	98.45	yes
125438	flagellated	motile2+ⓘ	yes	89.03	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Whole-Genome Sequencing Redefines Shewanella Taxonomy.	Thorell K, Meier-Kolthoff JP, Sjoling A, Martin-Rodriguez AJ.	Front Microbiol	10.3389/fmicb.2019.01861	2019
Phylogeny	Shewanella vesiculosa sp. nov., a psychrotolerant bacterium isolated from an Antarctic coastal area.	Bozal N, Montes MJ, Minana-Galbis D, Manresa A, Mercade E	Int J Syst Evol Microbiol	10.1099/ijs.0.000737-0	2009

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25334	IJSEM 336 2009 ( DOI 10.1099/ijs.0.000737-0 , PubMed 19196774 )
#28894	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25334
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Shewanella vesiculosa (LMG 244245, CECT 7339, M7)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_021560015

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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