Name: Halopiger thermotolerans SR-441
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133244

Type strain:

Species: Halopiger thermotolerans

Strain Designation: SR-441

Culture col. no.: JCM 19583, KCTC 4248

Strain history: <- Hiroaki Minegishi, Toyo Univ.

NCBI tax ID(s): 1383816 (species)

Other strains from Halopiger thermotolerans

H. thermotolerans JCM 19581
H. thermotolerans JCM 19582

Section

Halopiger thermotolerans SR-441 is an aerobe, pleomorphic-shaped archaeon that forms circular colonies and has a pink pigmentation.

colony-forming
pigmented
pleomorphic-shaped
aerobe
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Natrialbales*
	Family	*Natrialbaceae*
	Genus	*Halopiger*
	Species	**Halopiger thermotolerans**
	Full Scientific Name (LPSN)	Halopiger thermotolerans Minegishi et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	negative

[Ref.: #25131]	Cell length	1.0-6.0 µm

[Ref.: #25131]	Cell width	0.5-1.0 µm

[Ref.: #25131]	Cell shape	rod-shaped
[Ref.: #25131]	Cell shape	pleomorphic-shaped
[Ref.: #67771]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	pleomorphic-shaped

[Ref.: #25131]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #25131]

Colony shape

circular

[Ref.: #25131]	Pigment production	yes
[Ref.: #25131]	Pigmentation color	pink

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #25131]	growth	35-60 °C
[Ref.: #25131]	optimum	45 °C
[Ref.: #67770]	growth	45 °C
[Ref.: #67771]	growth	45 °C

[Ref.: #25131]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic
[Ref.: #67771]	Temperature range	thermophilic

	pH	Kind of pH		pH
[Ref.: #25131]			optimum	8
[Ref.: #25131]			growth	6.5-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25131]		NaCl		growth	1.7-4.6	M
[Ref.: #25131]		NaCl		optimum	2.5	M

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25131]	casein	-	hydrolysis
[Ref.: #25131]	cellulose ChEBI	-	hydrolysis
[Ref.: #25131]	chitin ChEBI	-	hydrolysis
[Ref.: #25131]	D-fructose ChEBI	+/-	carbon source
[Ref.: #25131]	D-galactose ChEBI	+	carbon source
[Ref.: #25131]	D-glucose ChEBI	+	carbon source
[Ref.: #25131]	D-mannitol ChEBI	+/-	carbon source
[Ref.: #25131]	D-mannose ChEBI	+/-	carbon source
[Ref.: #25131]	D-sorbitol ChEBI	-	carbon source
[Ref.: #25131]	D-xylose ChEBI	+/-	carbon source
[Ref.: #25131]	disodium fumarate ChEBI	+/-	carbon source
[Ref.: #25131]	disodium malate ChEBI	+	carbon source
[Ref.: #25131]	gelatin ChEBI	-	hydrolysis
[Ref.: #25131]	glycerol ChEBI	+	carbon source
[Ref.: #25131]	L-rhamnose ChEBI	+/-	carbon source
[Ref.: #25131]	lactose ChEBI	+/-	carbon source
[Ref.: #25131]	maltose ChEBI	+/-	carbon source
[Ref.: #25131]	mannan ChEBI	-	hydrolysis
[Ref.: #25131]	nitrate ChEBI	+	reduction
[Ref.: #25131]	ribose ChEBI	+/-	carbon source
[Ref.: #25131]	sodium acetate ChEBI	+	carbon source
[Ref.: #25131]	sodium citrate ChEBI	-	carbon source
[Ref.: #25131]	sodium L-glutamate ChEBI	+	carbon source
[Ref.: #25131]	sodium propionate ChEBI	+/-	carbon source
[Ref.: #25131]	sodium pyruvate ChEBI	+	carbon source
[Ref.: #25131]	sodium succinate ChEBI	+	carbon source
[Ref.: #25131]	starch ChEBI	-	hydrolysis
[Ref.: #25131]	sucrose ChEBI	+/-	carbon source
[Ref.: #25131]	tryptophan ChEBI	-	energy source
[Ref.: #25131]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic intermediate	Concentration		Antibiotic resistance	Concentration
[Ref.: #25131]	ampicillin ChEBI							yes	10	µg (disc)
[Ref.: #25131]	bacitracin ChEBI	yes	10	Unit (disc)
[Ref.: #25131]	carbenicillin ChEBI							yes	100	µg (disc)
[Ref.: #25131]	cefalotin ChEBI							yes	30	µg (disc)
[Ref.: #25131]	cefoxitin ChEBI							yes	300	µg (disc)
[Ref.: #25131]	chloramphenicol ChEBI							yes	30	µg (disc)
[Ref.: #25131]	erythromycin ChEBI				yes	15	µg (disc)
[Ref.: #25131]	gentamicin ChEBI							yes	120	µg (disc)
[Ref.: #25131]	kanamycin ChEBI							yes	30	µg (disc)
[Ref.: #25131]	nalidixic acid ChEBI				yes	30	µg (disc)
[Ref.: #25131]	neomycin ChEBI							yes	30	µg (disc)
[Ref.: #25131]	novobiocin ChEBI	yes	30	µg (disc)
[Ref.: #25131]	penicillin g ChEBI				yes	10	Unit (disc)
[Ref.: #25131]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #25131]	streptomycin ChEBI							yes	300	µg (disc)
[Ref.: #25131]	tetracycline ChEBI							yes	30	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25131]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #25131]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #25131]	catalase	+/-	1.11.1.6
[Ref.: #25131]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25131]	tryptophan deaminase	-	4.1.99.1
[Ref.: #25131]	urease	-	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67771]	Sample type/isolated from	From commercial solar salt imported from Australia to Japan, and boiled in Japan
[Ref.: #67771]	Country	Australia
[Ref.: #67771]	Country ISO 3 Code	AUS
[Ref.: #67771]	Continent	Australia and Oceania

[Ref.: #25131]	Sample type/isolated from	imported commercial salt
[Ref.: #25131]	Country	Australia
[Ref.: #25131]	Country ISO 3 Code	AUS
[Ref.: #25131]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Commercial salt produced in Australia
* marker position based on {}

Isolation sources categories

#Condition

#Saline

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB844674 (>99% sequence identity) for Halopiger thermotolerans from Microbeatlas

Aquatic Samples	1
Soil Samples	5
Animal Samples
Plant Samples
Total Samples	6

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25131]	16S rRNA	AB844674		GenBank

[Ref.: #25131]

GC-content

63.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #25131]

Culture collection no.

JCM 19583, KCTC 4248

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt.	Minegishi H, Shimogaki R, Enomoto S, Echigo A, Kondo Y, Nagaoka S, Shimane Y, Kamekura M, Itoh T, Ohkuma M, Nunoura T, Takai K, Usami R	Int J Syst Evol Microbiol	10.1099/ijsem.0.001455	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25131

H. S. Minegishi, R.,Enomoto, S.,Echigo, A.,Kondo, Y.,Nagaoka, S.,Shimane, Y.,Kamekura, M.,Itoh, T.,Ohkuma, M.,Nunoura, T.,Takai, K.,Usami, R.: Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt. IJSEM 66: 4975 - 4980 2016 ( DOI 10.1099/ijsem.0.001455 , PubMed 27562780 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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