Name: Roseomonas arcticisoli MC 3624
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133171

Type strain:

Species: Roseomonas arcticisoli

Strain Designation: MC 3624

Culture col. no.: CCTCC AB 2014278, LMG 28637

NCBI tax ID(s): 1597968 (species)

Section

Roseomonas arcticisoli MC 3624 is an aerobe, Gram-negative, coccus-shaped bacterium that was isolated from high Arctic tundra.

coccus-shaped
Gram-negative
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Roseomonas*
	Species	**Roseomonas arcticisoli**
	Full Scientific Name (LPSN)	Roseomonas arcticisoli Kim et al. 2016

Synonym

Falsiroseomonas arcticisoli

Information on morphological and physiological properties Morphology

[Ref.: #24946]	Gram stain	negative

[Ref.: #24946]	Cell length	0.56-0.84 µm

[Ref.: #24946]	Cell shape	coccus-shaped

[Ref.: #24946]	Motility	no

[Ref.: #24946]	Colony size	0.5-1.0 mm
[Ref.: #24946]	Colony color	pale pink
[Ref.: #24946]	Incubation period	5 days
[Ref.: #24946]	Cultivation medium used	R2A agar medium

[Ref.: #24946]	Pigment production	yes
[Ref.: #24946]	Pigment name	Carotenoid pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24946]

Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #24946]			growth	10-37 °C
[Ref.: #24946]			optimum	25-30 °C

[Ref.: #24946]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #24946]			optimum	8
[Ref.: #24946]			growth	5.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #24946]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #24946]		NaCl		growth	0-2.0	%(w/v)
[Ref.: #24946]		NaCl		maximum	2	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #24946]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #24946]	casein	-	hydrolysis
[Ref.: #24946]	dna ChEBI	-	hydrolysis
[Ref.: #24946]	gelatin ChEBI	-	hydrolysis
[Ref.: #24946]	glucose ChEBI	-	fermentation
[Ref.: #24946]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #24946]	nitrate ChEBI	+	reduction
[Ref.: #24946]	starch ChEBI	-	hydrolysis
[Ref.: #24946]	tryptophan ChEBI	+	energy source
[Ref.: #24946]	tween 20 ChEBI	-	hydrolysis
[Ref.: #24946]	tween 40 ChEBI	-	hydrolysis
[Ref.: #24946]	tween 60 ChEBI	-	hydrolysis
[Ref.: #24946]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #24946]	cefotaxime ChEBI	yes
[Ref.: #24946]	ceftazidime ChEBI		yes
[Ref.: #24946]	chloramphenicol ChEBI	yes
[Ref.: #24946]	fosfomycin ChEBI	yes
[Ref.: #24946]	gentamicin ChEBI		yes
[Ref.: #24946]	kanamycin ChEBI	yes
[Ref.: #24946]	minocycline ChEBI	yes
[Ref.: #24946]	ofloxacin ChEBI	yes
[Ref.: #24946]	penicillin g ChEBI	yes
[Ref.: #24946]	polymyxin b ChEBI		yes
[Ref.: #24946]	rifampicin ChEBI	yes
[Ref.: #24946]	streptomycin ChEBI	yes
[Ref.: #24946]	tetracycline ChEBI	yes
[Ref.: #24946]	vancomycin ChEBI		yes
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #24946]		acetoin ChEBI	no
[Ref.: #24946]		indole ChEBI	yes

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #24946]		acetoin ChEBI	-
[Ref.: #24946]		indole ChEBI		+

	Enzyme	Enzyme activity	EC number
[Ref.: #24946]	acid phosphatase	+	3.1.3.2
[Ref.: #24946]	alkaline phosphatase	+	3.1.3.1
[Ref.: #24946]	alpha-fucosidase	+	3.2.1.51
[Ref.: #24946]	alpha-mannosidase	+	3.2.1.24
[Ref.: #24946]	arginine dihydrolase	-	3.5.3.6
[Ref.: #24946]	beta-galactosidase	-	3.2.1.23
[Ref.: #24946]	beta-glucosidase	+	3.2.1.21
[Ref.: #24946]	catalase	-	1.11.1.6
[Ref.: #24946]	cytochrome oxidase	+	1.9.3.1
[Ref.: #24946]	esterase (C 4)	+
[Ref.: #24946]	esterase lipase (C 8)	+
[Ref.: #24946]	leucine arylamidase	+	3.4.11.1
[Ref.: #24946]	lipase (C 14)	+
[Ref.: #24946]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #24946]	tryptophan deaminase	+	4.1.99.1
[Ref.: #24946]	urease	-	3.5.1.5
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24946]	Sample type/isolated from	high Arctic tundra
[Ref.: #24946]	Geographic location (country and/or sea, region)	Ny-Ålesund, Svalbard Archipelago
[Ref.: #24946]	Country	Norway
[Ref.: #24946]	Country ISO 3 Code	NOR
[Ref.: #24946]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Climate

#Cold

#Tundra

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KP274055 (>99% sequence identity) for Roseomonas arcticisoli subclade from Microbeatlas

Aquatic Samples	1686
Soil Samples	643
Animal Samples	173
Plant Samples	152
Total Samples	2654

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24946]	Roseomonas arcticisoli strain MC 3624 16S ribosomal RNA gene, partial sequence	KP274055	1419	GenBank	1597968 tax ID

[Ref.: #24946]

GC-content

68.9 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24946]

Culture collection no.

CCTCC AB 2014278, LMG 28637

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas terricola sp. nov., isolated from agricultural soil.	Kim DU, Lee H, Kim SG, Ka JO	Int J Syst Evol Microbiol	10.1099/ijsem.0.002389	2017	*
Phylogeny	Roseomonas arcticisoli sp. nov., isolated from Arctic tundra soil.	Kim MC, Rim S, Pak S, Ren L, Zhang Y, Chang X, Li X, Fang C, Zheng C, Peng F	Int J Syst Evol Microbiol	10.1099/ijsem.0.001310	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24946

M. C. R. Kim, Songguk,Pak, Sehong,Ren, Lvzhi,Zhang, Yumin,Chang, Xulu,Li, Xuhuan,Fang, Chengxiang,Zheng, Congyi,Peng, Fang: Roseomonas arcticisoli sp. nov., isolated from Arctic tundra soil. IJSEM 66: 4057 - 4064 2016 ( DOI 10.1099/ijsem.0.001310 , PubMed 27412604 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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