Name: Lysobacter erysipheiresistens RS-LYSO-3
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133170

Type strain:

Species: Lysobacter erysipheiresistens

Strain Designation: RS-LYSO-3

Culture col. no.: CCIC 23922, JCM 31042, CICC 23922

Strain history: X. Bing; Yunnan Reascend Tob. Technol. Group Co., Ltd., China; RS-LYSO-3.

NCBI tax ID(s): 1749332 (species)

Special Collections

Section

Lysobacter erysipheiresistens RS-LYSO-3 is a Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from tobacco-cultivated soil.

colony-forming
Gram-negative
rod-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Lysobacter*
	Species	**Lysobacter erysipheiresistens**
	Full Scientific Name (LPSN)	Lysobacter erysipheiresistens Xie et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #24945]	Gram stain	negative

[Ref.: #24945]	Cell length	1.0-2.0 µm

[Ref.: #24945]	Cell width	0.2-0.5 µm

[Ref.: #24945]	Cell shape	rod-shaped

[Ref.: #24945]	Colony size	<0.5 mm
[Ref.: #24945]	Colony color	pale yellow
[Ref.: #24945]	Colony shape	circular
[Ref.: #24945]	Incubation period	4 days
[Ref.: #24945]	Cultivation medium used	2216E medium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24945]

Culture medium

2216E medium

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Culture medium growth

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Culture medium

LB medium (lysogeny broth)

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Culture medium growth

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24945]			growth	10.0-35.0 °C
[Ref.: #67770]			growth	30 °C

	pH	Kind of pH		pH
[Ref.: #24945]			growth	6.0-8.0

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #24945]		NaCl		growth	0.0-5.0	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #24945]	2-dehydro-D-gluconate ChEBI	-	carbon source
[Ref.: #24945]	5-dehydro-D-gluconate ChEBI	-	carbon source
[Ref.: #24945]	adenine ChEBI	-	hydrolysis
[Ref.: #24945]	adipate ChEBI	-	carbon source
[Ref.: #24945]	amygdalin ChEBI	-	carbon source
[Ref.: #24945]	arbutin ChEBI	-	carbon source
[Ref.: #24945]	casein	-	hydrolysis
[Ref.: #24945]	cellobiose ChEBI	-	carbon source
[Ref.: #24945]	chitin ChEBI	-	hydrolysis
[Ref.: #24945]	D-arabinose ChEBI	-	carbon source
[Ref.: #24945]	D-arabitol ChEBI	-	carbon source
[Ref.: #24945]	D-fructose ChEBI	-	carbon source
[Ref.: #24945]	D-fucose ChEBI	-	carbon source
[Ref.: #24945]	D-galactose ChEBI	+	growth
[Ref.: #24945]	D-galactose ChEBI	+	carbon source
[Ref.: #24945]	D-glucose ChEBI	+	growth
[Ref.: #24945]	D-glucose ChEBI	+	carbon source
[Ref.: #24945]	D-lyxose ChEBI	-	carbon source
[Ref.: #24945]	D-mannose ChEBI	-	growth
[Ref.: #24945]	D-mannose ChEBI	-	carbon source
[Ref.: #24945]	D-ribose ChEBI	-	carbon source
[Ref.: #24945]	D-tagatose ChEBI	-	carbon source
[Ref.: #24945]	D-xylose ChEBI	-	carbon source
[Ref.: #24945]	decanoate ChEBI	-	carbon source
[Ref.: #24945]	erythritol ChEBI	-	carbon source
[Ref.: #24945]	esculin ChEBI	-	carbon source
[Ref.: #24945]	galactitol ChEBI	-	carbon source
[Ref.: #24945]	gelatin ChEBI	+	hydrolysis
[Ref.: #24945]	gentiobiose ChEBI	-	carbon source
[Ref.: #24945]	glycerol ChEBI	-	carbon source
[Ref.: #24945]	glycogen ChEBI	-	growth
[Ref.: #24945]	glycogen ChEBI	-	carbon source
[Ref.: #24945]	guanine ChEBI	-	hydrolysis
[Ref.: #24945]	L-arabinose ChEBI	-	growth
[Ref.: #24945]	L-arabinose ChEBI	-	carbon source
[Ref.: #24945]	L-arabitol ChEBI	-	carbon source
[Ref.: #24945]	L-fucose ChEBI	-	carbon source
[Ref.: #24945]	L-rhamnose ChEBI	-	carbon source
[Ref.: #24945]	L-sorbose ChEBI	-	carbon source
[Ref.: #24945]	L-xylose ChEBI	-	carbon source
[Ref.: #24945]	lactose ChEBI	-	carbon source
[Ref.: #24945]	maltose ChEBI	-	growth
[Ref.: #24945]	maltose ChEBI	-	carbon source
[Ref.: #24945]	mannitol ChEBI	-	carbon source
[Ref.: #24945]	melezitose ChEBI	-	carbon source
[Ref.: #24945]	melibiose ChEBI	-	growth
[Ref.: #24945]	melibiose ChEBI	-	carbon source
[Ref.: #24945]	methyl beta-D-xylopyranoside ChEBI	-	carbon source
[Ref.: #24945]	methyl D-glucoside ChEBI	-	carbon source
[Ref.: #24945]	myo-inositol ChEBI	-	growth
[Ref.: #24945]	myo-inositol ChEBI	-	carbon source
[Ref.: #24945]	N-acetylglucosamine ChEBI	-	carbon source
[Ref.: #24945]	nitrate ChEBI	-	reduction
[Ref.: #24945]	phenylacetate ChEBI	+	growth
[Ref.: #24945]	phenylacetate ChEBI	+	carbon source
[Ref.: #24945]	potassium gluconate ChEBI	-	carbon source
[Ref.: #24945]	raffinose ChEBI	-	carbon source
[Ref.: #24945]	ribitol ChEBI	-	carbon source
[Ref.: #24945]	salicin ChEBI	-	growth
[Ref.: #24945]	salicin ChEBI	-	carbon source
[Ref.: #24945]	sodium citrate ChEBI	-	growth
[Ref.: #24945]	sodium citrate ChEBI	-	carbon source
[Ref.: #24945]	sorbitol ChEBI	-	carbon source
[Ref.: #24945]	starch ChEBI	-	growth
[Ref.: #24945]	starch ChEBI	-	hydrolysis
[Ref.: #24945]	starch ChEBI	-	carbon source
[Ref.: #24945]	sucrose ChEBI	+	carbon source
[Ref.: #24945]	synanthrin	+	growth
[Ref.: #24945]	synanthrin	+	carbon source
[Ref.: #24945]	trehalose ChEBI	-	growth
[Ref.: #24945]	trehalose ChEBI	-	carbon source
[Ref.: #24945]	tryptophan ChEBI	-	energy source
[Ref.: #24945]	turanose ChEBI	-	carbon source
[Ref.: #24945]	tween 80 ChEBI	+	hydrolysis
[Ref.: #24945]	tyrosine ChEBI	-	hydrolysis
[Ref.: #24945]	xanthine ChEBI	-	hydrolysis
[Ref.: #24945]	xylitol ChEBI	-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #24945]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #24945]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #24945]	acid phosphatase	+	3.1.3.2
[Ref.: #24945]	alkaline phosphatase	+	3.1.3.1
[Ref.: #24945]	alpha-galactosidase	-	3.2.1.22
[Ref.: #24945]	alpha-glucosidase	-	3.2.1.20
[Ref.: #24945]	alpha-mannosidase	-	3.2.1.24
[Ref.: #24945]	arginine dihydrolase	-	3.5.3.6
[Ref.: #24945]	beta-D-fucosidase	-	3.2.1.38
[Ref.: #24945]	beta-galactosidase	-	3.2.1.23
[Ref.: #24945]	beta-glucosidase	-	3.2.1.21
[Ref.: #24945]	beta-glucuronidase	-	3.2.1.31
[Ref.: #24945]	catalase	+	1.11.1.6
[Ref.: #24945]	chymotrypsin	+	3.4.4.5
[Ref.: #24945]	cystine arylamidase	+	3.4.11.3
[Ref.: #24945]	cytochrome oxidase	+	1.9.3.1
[Ref.: #24945]	DNase	-
[Ref.: #24945]	esterase (C 4)	-
[Ref.: #24945]	esterase lipase (C 8)	+
[Ref.: #24945]	leucyl glycin arylamidase	+	3.4.11.1
[Ref.: #24945]	lipase (C 14)	-
[Ref.: #24945]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #24945]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #24945]	trypsin	+	3.4.21.4
[Ref.: #24945]	tryptophan deaminase	-	4.1.99.1
[Ref.: #24945]	urease	-	3.5.1.5
[Ref.: #24945]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24945]	Sample type/isolated from	tobacco-cultivated soil
[Ref.: #24945]	Geographic location (country and/or sea, region)	Chuxiong, Yunnan province
[Ref.: #24945]	Country	Republic of China
[Ref.: #24945]	Country ISO 3 Code	CHN
[Ref.: #24945]	Continent	Asia
[Ref.: #24945]	Enrichment culture	LB agar plates
[Ref.: #24945]	Enrichment culture composition	20 g LB broth (Beijing Aoboxing Bio-Tech)
[Ref.: #24945]	Enrichment culture duration	3 days
[Ref.: #24945]	Enrichment culture temperature	30 ̊C

[Ref.: #67770]	Sample type/isolated from	Tobacco-cultivated soil near Chuxiong
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24945]	Lysobacter erysipheiresistens strain RS-LYSO-3 16S ribosomal RNA gene, partial sequence	KT001243	1410	GenBank ENA	1749332 tax ID

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GC-content

68 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24945]

Culture collection no.

CCIC 23922, JCM 31042, CICC 23922

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lysobacter erysipheiresistens sp. nov., an antagonist of powdery mildew, isolated from tobacco-cultivated soil.	Xie B, Li T, Lin X, Wang CJ, Chen YJ, Liu WJ, Zhao ZW	Int J Syst Evol Microbiol	10.1099/ijsem.0.001303	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24945

B. L. Xie, Tao,Lin, Xin,Wang, Chao-Jun,Chen, Yun-Jiao,Liu, Wei-Juan,Zhao, Zhi-Wei: Lysobacter erysipheiresistens sp. nov., an antagonist of powdery mildew, isolated from tobacco-cultivated soil. IJSEM 66: 4016 - 4021 2016 ( DOI 10.1099/ijsem.0.001303 , PubMed 27411921 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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