Name: Alteromonas macleodii AD037
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132691

Type strain:

Species: Alteromonas macleodii

Strain Designation: AD037

Culture col. no.: DSM 100461

Strain history: <- T.G.S. Adrian, Univ. of Malaya, Kuala Lumpur, Malaysia; AD037

NCBI tax ID(s): 28108 (species)

SI-ID 408371

DSM 100461

Special Collections

DSMZ

Other strains from Alteromonas macleodii

Section

When using BacDive for research please cite our paper

Alteromonas macleodii AD037 is a mesophilic bacterium that was isolated from coastal marine waters.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Alteromonas*
	Species	**Alteromonas macleodii**
	Full Scientific Name (LPSN)	Alteromonas macleodii Baumann et al. 1972 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #125438]	Gram stain	negative Confidence in %100
[Ref.: #125439]	Gram stain	negative Confidence in %99.2

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24481]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #24481]

Culture medium growth

[Ref.: #24481]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24481]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24481]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #125439]

Oxygen tolerance

obligate aerobe Confidence in %98.9

[Ref.: #125438]	Ability of spore formation	no Confidence in %91.785
[Ref.: #125439]	Ability of spore formation	no Confidence in %98.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24481]	Sample type/isolated from	coastal marine waters
[Ref.: #24481]	Country	Malaysia
[Ref.: #24481]	Country ISO 3 Code	MYS
[Ref.: #24481]	Continent	Asia
[Ref.: #24481]	Geographic location	2.5200°/101.8000°
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24481]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Alteromonas macleodii AD037	GCA_000808635	contig	GenBank ENA	28108 tax ID	*
[Ref.: #66792]	Alteromonas macleodii AD037	28108.22	wgs	PATRIC	28108 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %	In training data
	Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alteromonas macleodii AD037 PATRIC: 28108.22
[Ref.: #125438]	gram-positive	gram-positiveⓘ	no	100	no
[Ref.: #125438]	anaerobic	anaerobicⓘ	no	97.316	no
[Ref.: #125438]	spore-forming	spore-formingⓘ	no	91.785	no
[Ref.: #125438]	thermophile	thermophilicⓘ	no	99.481	no
[Ref.: #125438]	aerobic	aerobicⓘ	yes	77.208	no
[Ref.: #125438]	motile2+	flagellatedⓘ	yes	85.218	no

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Alteromonas macleodii AD037 NCBI: GCA_000808635
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	98.1
[Ref.: #125439]	BacteriaNet	motilityⓘ	yes	56.3
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	99.2
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	98.9

Availability in culture collections External links

[Ref.: #24481]

Culture collection no.

DSM 100461

[Ref.: #90999]

SI-ID 408371

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24481

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100461

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90999

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408371.1 )

#125438

Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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