Alteromonas macleodii (DSM 100460, AD006)

Name: Alteromonas macleodii (DSM 100460, AD006)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132690

Type strain

Strain Designation AD006

Culture col. no. DSM 100460 AD006

NCBI tax ID(s) 28108

Special Collections DSMZ

Links

Alteromonas macleodii AD006 is a mesophilic prokaryote that was isolated from coastal marine waters.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 396972

DSM 100460

@ref 20215

Last LPSN update 2025-12-16 10:01:35

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Alteromonadaceae

Genus Alteromonas

Species Alteromonas macleodii

Full scientific name Alteromonas macleodii Baumann et al. 1972 (Approved Lists 1980)

BacDive ID	Other strains from **Alteromonas macleodii** (13)	Type strain
444	A. macleodii 107, DSM 6062, ATCC 27126, CCUG 16128, CIP ... (type strain)
23554	A. macleodii AMUM8, AMISUM8, Ionian Sea UM8, DSM 26490
23558	A. macleodii AMBLS11, Black Sea 11, BS11, DSM 26494
23559	A. macleodii AD45, AMBAS45, Balearic Sea AD45, DSM 26495
23561	A. macleodii AMU12, AMISU12, Ionian Sea U12, DSM 26497
23562	A. macleodii AMBLS7, Black Sea 7, BS7, DSM 26498
23564	A. macleodii AMBLS8, Black Sea 8, BS8, DSM 26500
23566	A. macleodii AMBLSH84-3, Black Sea H84-3, DSM 26502
23567	A. macleodii AMBLSH94-8, Black Sea H94-8, DSM 26503
23568	A. macleodii AM673, AMEC673, English Channel 673, DSM ...
23569	A. macleodii AMAND7, Andaman Sea 7, DSM 26505
132691	A. macleodii AD037, DSM 100461
174855	A. macleodii Te101, DSM 104636

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	97.5
125438	negative	100

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24480	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24480	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.1

Spore formation

@ref	Spore formation	Confidence
125439		96
125438		91.315

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Latitude	Longitude
24480	coastal marine waters	Malaysia	MYS	Asia	2.52	101.8 2.52/101.8

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24480	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM80859v1 assembly for Alteromonas macleodii AD006	contig	GCA_000808595	28108.21	2982957949	28108	72.2

Genome browser: GCA_000808595

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Alteromonas macleodii AD006
NCBI: GCA_000808595

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.00	no
125439	motility	BacteriaNetⓘ	yes	65.00	no
125439	gram_stain	BacteriaNetⓘ	negative	97.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alteromonas macleodii AD006
PATRIC: 28108.21

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	96.69	no
125438	spore-forming	spore-formingⓘ	no	91.32	no
125438	thermophilic	thermophileⓘ	no	97.48	yes
125438	aerobic	aerobicⓘ	yes	76.63	no
125438	flagellated	motile2+ⓘ	yes	85.11	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24480	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100460
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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