Alteromonas macleodii (DSM 6062, ATCC 27126, CCUG 16128)

Name: Alteromonas macleodii (DSM 6062, ATCC 27126, CCUG 16128)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 444

Type strain

Strain Designation 107

Culture col. no. DSM 6062 ATCC 27126 CCUG 16128 CIP 103198 JCM 20772 5 more

NCBI tax ID(s) 529120 28108

Special Collections DSMZ CCUG JCM CIP

Links

Alteromonas macleodii 107 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from seawater.

Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 870

LMG 2843,ATCC 27126,CCUG 16128,NCMB 1963,CIP 103198,IAM 12920,NCIMB 1963,CIP 74.03,CECT 4189,CIP 74.3,KCTC 2957,KCTC 12170,NBRC 102226,JCM 20772,DSM 6062

@ref 20215

Last LPSN update 2025-12-16 09:46:51

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Alteromonadaceae

Genus Alteromonas

Species Alteromonas macleodii

Full scientific name Alteromonas macleodii Baumann et al. 1972 (Approved Lists 1980)

BacDive ID	Other strains from **Alteromonas macleodii** (13)	Type strain
23554	A. macleodii AMUM8, AMISUM8, Ionian Sea UM8, DSM 26490
23558	A. macleodii AMBLS11, Black Sea 11, BS11, DSM 26494
23559	A. macleodii AD45, AMBAS45, Balearic Sea AD45, DSM 26495
23561	A. macleodii AMU12, AMISU12, Ionian Sea U12, DSM 26497
23562	A. macleodii AMBLS7, Black Sea 7, BS7, DSM 26498
23564	A. macleodii AMBLS8, Black Sea 8, BS8, DSM 26500
23566	A. macleodii AMBLSH84-3, Black Sea H84-3, DSM 26502
23567	A. macleodii AMBLSH94-8, Black Sea H94-8, DSM 26503
23568	A. macleodii AM673, AMEC673, English Channel 673, DSM ...
23569	A. macleodii AMAND7, Andaman Sea 7, DSM 26505
132690	A. macleodii AD006, DSM 100460
132691	A. macleodii AD037, DSM 100461
174855	A. macleodii Te101, DSM 104636

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
120737	negative	rod-shaped
125438	negative

Colony morphology

46448

Incubation period2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2425	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
40559	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
120737	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
2425	positive	growth	26	mesophilic
40559	positive	growth	25	mesophilic
46448	positive	growth	20-30
67770	positive	growth	25	mesophilic
120737	positive	growth	10-41
120737	negative	growth	5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
46448	aerobe
125439	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125438		91.83
125439		90.5

Halophily

@ref	Salt	Growth	Tested relation	Concentration
120737	NaCl	positive	growth	2-10 %
120737	NaCl		growth	0 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
120737	17632 ChEBI	nitrate	-	reduction
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
120737	16301 ChEBI	nitrite	-	reduction
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
120737	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
120737	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
120737	15688 ChEBI	acetoin	-
120737	17234 ChEBI	glucose
68369	35581 ChEBI	indole		from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120737	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120737	amylase	+
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
120737	beta-galactosidase	+	3.2.1.23
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120737	caseinase	+	3.4.21.50
120737	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
120737	DNase	+
68382	esterase lipase (C 8)	+		from API zym
120737	gelatinase	+
68369	gelatinase	+		from API 20NE
120737	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
120737	lipase	-
120737	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
120737	ornithine decarboxylase	-	4.1.1.17
120737	oxidase	+
120737	phenylalanine ammonia-lyase	+	4.3.1.24
120737	protease	-
68382	trypsin	-	3.4.21.4	from API zym
120737	tryptophan deaminase	-
120737	tween esterase	+
120737	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
46448	-	+	-	+	-	+	+	-	-	-	+	-	-	-	-	-	-	-	-	-
120737	-	+	+	+	+	+	+	-	-	-	+	+	-	-	-	+	+	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
46448	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
120737	not determinedn.d.	-	-	-	-	-	+/-	-	-	-	+/-	+/-	+/-	-	-	-	-	-	+/-	-	-	+/-	-	-	+/-	+	+/-	+/-	+/-	+/-	+/-	+/-	+/-	-	-	-	-	+/-	-	+/-	+/-	-	-	-	-	-	-	-	+/-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120737	not determinedn.d.	+	+	+	+	-	-	+	+	-	+	+	+	+	+	-	+	+	+	+	-	-	+	+	-	-	+	-	-	-	-	-	+	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	+	+	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type
2425	seawater
46448	Seawater
67770	Seawater
120737	Environment, Sea water

Taxonmaps

69479

Global distribution of 16S sequence Y18228 (>99% sequence identity) for Alteromonas from Microbeatlas

Aquatic Samples	5573
Soil Samples	47
Animal Samples	164
Plant Samples	28
Total Samples	5812

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2425	1	Risk group (German classification) According to TRBA 466
120737	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	FeSOD_KO assembly for Alteromonas macleodii	complete	GCA_051058425	28108	97.96
124043	ASM5050032v1 assembly for Alteromonas macleodii ATCC 27126	complete	GCA_050500325	529120	97.91
124043	NiSOD_KO assembly for Alteromonas macleodii	complete	GCA_051058755	28108	97.17
66792	ASM17263v2 assembly for Alteromonas macleodii ATCC 27126	complete	GCA_000172635	529120	96.61
124043	ASM4090770v1 assembly for Alteromonas macleodii NBRC 102226	contig	GCA_040907705	28108	73.46

Genome browser: GCA_051058425

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Alteromonas macleodii strain ATCC 27126 16S-23S ribosomal RNA intergenic spacer, partial sequence	AY831613	275	529120
20218	Alteromonas macleodii strain ATCC 27126 16S ribosomal RNA gene, partial sequence	AY831617	433	529120
20218	Alteromonas sp. CFW-5 16S ribosomal RNA, partial sequence	AF123063	160	93658
20218	Alteromonas sp. CFS-3 16S ribosomal RNA, partial sequence	AF123068	160	93664
20218	A.macleodii 16S rRNA gene (IAM 12920T)	X82145	1432	28108
20218	Alteromonas macleodii gene for 16S rRNA, partial sequence, strain: NBRC 102226	AB681740	1458	28108
2425	Alteromonas macleodii 16S rRNA gene, strain DSM 6062, partial	Y18228	1492	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831615	433	233316
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831616	434	304754
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831618	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831619	432	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831620	432	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831621	431	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831622	432	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831623	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831624	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831625	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831626	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831627	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831628	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831629	434	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831630	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831631	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831632	433	28108
124043	Alteromonas macleodii strain Adriatic_2 16S ribosomal RNA gene, partial sequence.	AY831633	432	28108
124043	Alteromonas macleodii ATCC 27126 16S ribosomal RNA gene, partial sequence.	MN901177	596	529120
124043	Alteromonas macleodii ATCC 27126 16S ribosomal RNA gene, partial sequence.	MN905344	639	529120
124043	Alteromonas macleodii ATCC 27126 16S ribosomal RNA gene, partial sequence.	MW111186	449	529120
124043	Alteromonas macleodii ATCC 27126 16S ribosomal RNA gene, partial sequence.	MW198102	601	529120

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Alteromonas macleodii ATCC 27126
PATRIC: 529120.14

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	90.50	no
125439	motility	BacteriaNetⓘ	yes	61.50	no
125439	gram_stain	BacteriaNetⓘ	negative	89.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alteromonas macleodii ATCC 27126 ATCC 27126
NCBI: GCA_000172635.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	97.26	yes
125438	aerobic	aerobicⓘ	yes	76.84	yes
125438	spore-forming	spore-formingⓘ	no	91.83	no
125438	thermophilic	thermophileⓘ	no	97.98	yes
125438	flagellated	motile2+ⓘ	yes	85.91	no

Literature

Title	Authors	Journal	DOI	Year
Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces.	Frias-Lopez J, Zerkle AL, Bonheyo GT, Fouke BW.	Appl Environ Microbiol	10.1128/aem.68.5.2214-2228.2002	2002
Collaborative metabolic curation of an emerging model marine bacterium, Alteromonas macleodii ATCC 27126.	Sher D, George EE, Wietz M, Gifford S, Zoccarato L, Weissberg O, Koedooder C, Valiya Kalladi WB, Barreto Filho MM, Mireles R, Malavin S, Liddor Naim M, Idan T, Shrivastava V, Itelson L, Sade D, Abu Hamoud A, Soussan-Farhat Y, Barak N, Karp P, Moore LR.	PLoS One	10.1371/journal.pone.0321141	2025
Bottom-up and top-down controls on Alteromonas macleodii lead to different dissolved organic matter compositions.	Chen Q, Lonborg C, Chen F, Zhang R, Cai R, Li Y, He C, Shi Q, Jiao N, Zheng Q.	ISME Commun	10.1093/ismeco/ycae010	2024
Draft Genome Sequences of Four Bacterial Strains of Heterotrophic Alteromonas macleodii and Marinobacter, Isolated from a Nonaxenic Culture of Two Marine Synechococcus Strains.	Arias-Orozco P, Yi Y, Kuipers OP.	Microbiol Resour Announc	10.1128/mra.00116-21	2021
Biogel scavenging slows the sinking of organic particles to the ocean depths.	Alcolombri U, Nissan A, Slomka J, Charlton S, Secchi E, Short I, Lee KS, Peaudecerf FJ, Baumgartner DA, Sichert A, Sauer U, Sengupta A, Stocker R.	Nat Commun	10.1038/s41467-025-57982-5	2025
Abundant Sulfitobacter marine bacteria protect Emiliania huxleyi algae from pathogenic bacteria.	Beiralas R, Ozer N, Segev E.	ISME Commun	10.1038/s43705-023-00311-y	2023
Nutrient-dependent interactions between a marine copiotroph Alteromonas and a diatom Thalassiosira pseudonana.	Cai G, Yu X, Wang H, Zheng T, Azam F.	mBio	10.1128/mbio.00940-23	2023
Complete Genome Sequence of Alteromonas sp. Strain I4, Isolated from the Japan Sea.	Miyazaki K, Izumi K.	Microbiol Resour Announc	10.1128/mra.01277-19	2019
Draft Genome Sequences of Four Alteromonas macleodii Strains Isolated from Copper Coupons and Grown Long-Term at Elevated Copper Levels.	Cusick KD, Dale JR, Little BJ, Biffinger JC.	Genome Announc	10.1128/genomea.01311-16	2016
Draft Genome Sequence of Alteromonas macleodii Strain MIT1002, Isolated from an Enrichment Culture of the Marine Cyanobacterium Prochlorococcus.	Biller SJ, Coe A, Martin-Cuadrado AB, Chisholm SW.	Genome Announc	10.1128/genomea.00967-15	2015
A Novel Alginate Lyase: Identification, Characterization, and Potential Application in Alginate Trisaccharide Preparation.	Xue Z, Sun XM, Chen C, Zhang XY, Chen XL, Zhang YZ, Fan SJ, Xu F.	Mar Drugs	10.3390/md20030159	2022
Why Close a Bacterial Genome? The Plasmid of Alteromonas Macleodii HOT1A3 is a Vector for Inter-Specific Transfer of a Flexible Genomic Island.	Fadeev E, De Pascale F, Vezzi A, Hubner S, Aharonovich D, Sher D.	Front Microbiol	10.3389/fmicb.2016.00248	2016
Characterization and genomic analysis of phage vB_ValR_NF, representing a new viral family prevalent in the Ulva prolifera blooms.	Zhang X, Liang Y, Zheng K, Wang Z, Dong Y, Liu Y, Ren L, Wang H, Han Y, McMinn A, Sung YY, Mok WJ, Wong LL, He J, Wang M.	Front Microbiol	10.3389/fmicb.2023.1161265	2023
Multiple Megaplasmids Confer Extremely High Levels of Metal Tolerance in Alteromonas Strains.	Cusick KD, Polson SW, Duran G, Hill RT.	Appl Environ Microbiol	10.1128/aem.01831-19	2020
Genome and Ecology of a Novel Alteromonas Podovirus, ZP6, Representing a New Viral Genus, Mareflavirus.	Wang Z, Zhang F, Liang Y, Zheng K, Gu C, Zhang W, Liu Y, Zhang X, Shao H, Jiang Y, Jiang Y, Guo C, He H, Wang H, Sung YY, Mok WJ, Wong LL, He J, McMinn A, Wang M.	Microbiol Spectr	10.1128/spectrum.00463-21	2021
Production and Reutilization of Fluorescent Dissolved Organic Matter by a Marine Bacterial Strain, Alteromonas macleodii.	Goto S, Tada Y, Suzuki K, Yamashita Y.	Front Microbiol	10.3389/fmicb.2017.00507	2017
Marine bacteria Alteromonas spp. require UDP-glucose-4-epimerase for aggregation and production of sticky exopolymer.	Robertson JM, Garza EA, Stubbusch AKM, Dupont CL, Hwa T, Held NA.	mBio	10.1128/mbio.00038-24	2024
Adaptation to Varying Salinity in Halomonas elongata: Much More Than Ectoine Accumulation.	Hobmeier K, Cantone M, Nguyen QA, Pfluger-Grau K, Kremling A, Kunte HJ, Pfeiffer F, Marin-Sanguino A.	Front Microbiol	10.3389/fmicb.2022.846677	2022
Genomic diversity of "deep ecotype" Alteromonas macleodii isolates: evidence for Pan-Mediterranean clonal frames.	Lopez-Perez M, Gonzaga A, Rodriguez-Valera F.	Genome Biol Evol	10.1093/gbe/evt089	2013
Distantly related Alteromonas bacteriophages share tail fibers exhibiting properties of transient chaperone caps.	Gonzalez-Serrano R, Rosselli R, Roda-Garcia JJ, Martin-Cuadrado AB, Rodriguez-Valera F, Dunne M.	Nat Commun	10.1038/s41467-023-42114-8	2023
Phylogenomics of SAR116 Clade Reveals Two Subclades with Different Evolutionary Trajectories and an Important Role in the Ocean Sulfur Cycle.	Roda-Garcia JJ, Haro-Moreno JM, Huschet LA, Rodriguez-Valera F, Lopez-Perez M.	mSystems	10.1128/msystems.00944-21	2021
Pangenome Evolution in the Marine Bacterium Alteromonas.	Lopez-Perez M, Rodriguez-Valera F.	Genome Biol Evol	10.1093/gbe/evw098	2016
Polyclonality of concurrent natural populations of Alteromonas macleodii.	Gonzaga A, Martin-Cuadrado AB, Lopez-Perez M, Megumi Mizuno C, Garcia-Heredia I, Kimes NE, Lopez-Garcia P, Moreira D, Ussery D, Zaballos M, Ghai R, Rodriguez-Valera F.	Genome Biol Evol	10.1093/gbe/evs112	2012
Pseudoalteromonas piratica strain OCN003 is a coral pathogen that causes a switch from chronic to acute Montipora white syndrome in Montipora capitata.	Beurmann S, Ushijima B, Videau P, Svoboda CM, Smith AM, Rivers OS, Aeby GS, Callahan SM.	PLoS One	10.1371/journal.pone.0188319	2017
A method for molecular analysis of catalase gene diversity in seawater.	Wang W, Ji X, Yuan C, Dai F, Zhu J, Sun M.	Indian J Microbiol	10.1007/s12088-013-0404-1	2013
The presence and absence of periplasmic rings in bacterial flagellar motors correlates with stator type.	Kaplan M, Ghosal D, Subramanian P, Oikonomou CM, Kjaer A, Kjaer A, Pirbadian S, Ortega DR, Briegel A, El-Naggar MY, Jensen GJ.	Elife	10.7554/elife.43487	2019
Single-cell genome sequencing at ultra-high-throughput with microfluidic droplet barcoding.	Lan F, Demaree B, Ahmed N, Abate AR.	Nat Biotechnol	10.1038/nbt.3880	2017
[NiFe] hydrogenase from Alteromonas macleodii with unusual stability in the presence of oxygen and high temperature.	Vargas WA, Weyman PD, Tong Y, Smith HO, Xu Q.	Appl Environ Microbiol	10.1128/aem.01559-10	2011
Two Distinct Bacterial Biofilm Components Trigger Metamorphosis in the Colonial Hydrozoan Hydractinia echinata.	Guo H, Rischer M, Westermann M, Beemelmanns C.	mBio	10.1128/mbio.00401-21	2021
Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph.	Lopez-Perez M, Gonzaga A, Martin-Cuadrado AB, Onyshchenko O, Ghavidel A, Ghai R, Rodriguez-Valera F.	Sci Rep	10.1038/srep00696	2012
Genetic Manipulation of Competition for Nitrate between Heterotrophic Bacteria and Diatoms.	Diner RE, Schwenck SM, McCrow JP, Zheng H, Allen AE.	Front Microbiol	10.3389/fmicb.2016.00880	2016
Phasing of single DNA molecules by massively parallel barcoding.	Borgstrom E, Redin D, Lundin S, Berglund E, Andersson AF, Ahmadian A.	Nat Commun	10.1038/ncomms8173	2015
In silico characterization of pectate lyase protein sequences from different source organisms.	Dubey AK, Yadav S, Kumar M, Singh VK, Sarangi BK, Yadav D.	Enzyme Res	10.4061/2010/950230	2010
Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp.	Dong X, Kleiner M, Sharp CE, Thorson E, Li C, Liu D, Strous M.	Front Microbiol	10.3389/fmicb.2017.01461	2017
Characterization of a Metal-Resistant Bacillus Strain With a High Molybdate Affinity ModA From Contaminated Sediments at the Oak Ridge Reservation.	Ge X, Thorgersen MP, Poole FL, Deutschbauer AM, Chandonia JM, Novichkov PS, Gushgari-Doyle S, Lui LM, Nielsen T, Chakraborty R, Adams PD, Arkin AP, Hazen TC, Adams MWW.	Front Microbiol	10.3389/fmicb.2020.587127	2020
Environmental Breviatea harbour mutualistic Arcobacter epibionts.	Hamann E, Gruber-Vodicka H, Kleiner M, Tegetmeyer HE, Riedel D, Littmann S, Chen J, Milucka J, Viehweger B, Becker KW, Dong X, Stairs CW, Hinrichs KU, Brown MW, Roger AJ, Strous M.	Nature	10.1038/nature18297	2016
Syntrophic linkage between predatory Carpediemonas and specific prokaryotic populations.	Hamann E, Tegetmeyer HE, Riedel D, Littmann S, Ahmerkamp S, Chen J, Hach PF, Strous M.	ISME J	10.1038/ismej.2016.197	2017
Bacterial DNA sifted from the Trichoplax adhaerens (Animalia: Placozoa) genome project reveals a putative rickettsial endosymbiont.	Driscoll T, Gillespie JJ, Nordberg EK, Azad AF, Sobral BW.	Genome Biol Evol	10.1093/gbe/evt036	2013
Comparative in silico analysis of ftsZ gene from different bacteria reveals the preference for core set of codons in coding sequence structuring and secondary structural elements determination.	Pal A, Saha BK, Saha J.	PLoS One	10.1371/journal.pone.0219231	2019
Manganese uptake in marine bacteria; the novel MntX transporter is widespread in Roseobacters, Vibrios, Alteromonadales and the SAR11 and SAR116 clades.	Green RT, Todd JD, Johnston AW.	ISME J	10.1038/ismej.2012.140	2013
High-throughput isotopic analysis of RNA microarrays to quantify microbial resource use.	Mayali X, Weber PK, Brodie EL, Mabery S, Hoeprich PD, Pett-Ridge J.	ISME J	10.1038/ismej.2011.175	2012
Pa0148 from Pseudomonas aeruginosa catalyzes the deamination of adenine.	Goble AM, Zhang Z, Sauder JM, Burley SK, Swaminathan S, Raushel FM.	Biochemistry	10.1021/bi200868u	2011
Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913.	Qin QL, Li Y, Zhang YJ, Zhou ZM, Zhang WX, Chen XL, Zhang XY, Zhou BC, Wang L, Zhang YZ.	ISME J	10.1038/ismej.2010.103	2011
ANCHOR: a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples.	Gonzalez E, Pitre FE, Brereton NJB.	Environ Microbiol	10.1111/1462-2920.14632	2019
Comparison of a fluorogenic assay with a conventional method for rapid detection of Vibrio parahaemolyticus in seafoods.	Venkateswaran K, Kurusu T, Satake M, Shinoda S.	Appl Environ Microbiol	10.1128/aem.62.9.3516-3520.1996	1996
Absence of surface-associated microorganisms in adult oysters (Crassostrea gigas).	Garland CD, Nash GV, McMeekin TA.	Appl Environ Microbiol	10.1128/aem.44.5.1205-1211.1982	1982
Differential Effects of Dimethylsulfoniopropionate, Dimethylsulfonioacetate, and Other S-Methylated Compounds on the Growth of Sinorhizobium meliloti at Low and High Osmolarities.	Pichereau V, Pocard JA, Hamelin J, Blanco C, Bernard T.	Appl Environ Microbiol	10.1128/aem.64.4.1420-1429.1998	1998
Taxonomy of aerobic marine eubacteria.	Baumann L, Baumann P, Mandel M, Allen RD.	J Bacteriol	10.1128/jb.110.1.402-429.1972	1972
Isolation and characterization of polyhydroxyalkanoate-degrading bacteria in seawater at two different depths from Suruga Bay.	Hachisuka S-I, Sakurai T, Mizuno S, Kosuge K, Endo S, Ishii-Hyakutake M, Miyahara Y, Yamazaki M, Tsuge T.	Appl Environ Microbiol	10.1128/aem.01488-23	2023
Description of a new polymer-secreting bacterium from a deep-sea hydrothermal vent, Alteromonas macleodii subsp. fijiensis, and preliminary characterization of the polymer.	Raguenes G, Pignet P, Gauthier G, Peres A, Christen R, Rougeaux H, Barbier G, Guezennec J.	Appl Environ Microbiol	10.1128/aem.62.1.67-73.1996	1996
Extracellular polymeric substances (EPS) producing and oil degrading bacteria isolated from the northern Gulf of Mexico.	Bacosa HP, Bacosa HP, Kamalanathan M, Chiu MH, Tsai SM, Sun L, Labonte JM, Schwehr KA, Hala D, Santschi PH, Chin WC, Quigg A.	PLoS One	10.1371/journal.pone.0208406	2018
Phagocytosis-like cell engulfment by a planctomycete bacterium.	Shiratori T, Suzuki S, Kakizawa Y, Ishida KI.	Nat Commun	10.1038/s41467-019-13499-2	2019
Shallow-Water Hydrothermal Vents as Natural Accelerators of Bacterial Antibiotic Resistance in Marine Coastal Areas.	Arcadi E, Rastelli E, Tangherlini M, Rizzo C, Mancuso M, Sanfilippo M, Esposito V, Andaloro F, Romeo T.	Microorganisms	10.3390/microorganisms10020479	2022
Rapid, quantitative PCR monitoring of growth of Clostridium botulinum type E in modified-atmosphere-packaged fish.	Kimura B, Kawasaki S, Nakano H, Fujii T.	Appl Environ Microbiol	10.1128/aem.67.1.206-216.2001	2001
Microbes enriched in seawater after addition of coral mucus.	Allers E, Niesner C, Wild C, Pernthaler J.	Appl Environ Microbiol	10.1128/aem.01870-07	2008
Bacteria mediate methylation of iodine in marine and terrestrial environments.	Amachi S, Kamagata Y, Kanagawa T, Muramatsu Y.	Appl Environ Microbiol	10.1128/aem.67.6.2718-2722.2001	2001
Structural activity relationship studies of zebra mussel antifouling and antimicrobial agents from verongid sponges.	Diers JA, Pennaka HK, Peng J, Bowling JJ, Duke SO, Hamann MT.	J Nat Prod	10.1021/np040097t	2004
Petrobactin, a siderophore produced by Alteromonas, mediates community iron acquisition in the global ocean.	Manck LE, Park J, Tully BJ, Poire AM, Bundy RM, Dupont CL, Barbeau KA	ISME J	10.1038/s41396-021-01065-y	2021
Transcriptomic Study of Substrate-Specific Transport Mechanisms for Iron and Carbon in the Marine Copiotroph Alteromonas macleodii.	Manck LE, Espinoza JL, Dupont CL, Barbeau KA	mSystems	10.1128/mSystems.00070-20	2020
Gene cloning and characterization of an alpha-amylase from Alteromonas macleodii B7 for Enteromorpha polysaccharide degradation.	Han X, Lin B, Ru G, Zhang Z, Liu Y, Hu Z	J Microbiol Biotechnol	10.4014/jmb.1304.04036	2014
Complete genome sequence of the copiotrophic marine bacterium Alteromonas macleodii strain ATCC 27126T.	Gonzaga A, Lopez-Perez M, Martin-Cuadrado AB, Ghai R, Rodriguez-Valera F	J Bacteriol	10.1128/JB.01565-12	2012
Comparative genomics reveals adaptation by Alteromonas sp. SN2 to marine tidal-flat conditions: cold tolerance and aromatic hydrocarbon metabolism.	Math RK, Jin HM, Kim JM, Hahn Y, Park W, Madsen EL, Jeon CO	PLoS One	10.1371/journal.pone.0035784	2012
Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter.	Ivars-Martinez E, Martin-Cuadrado AB, D'Auria G, Mira A, Ferriera S, Johnson J, Friedman R, Rodriguez-Valera F	ISME J	10.1038/ismej.2008.74	2008
A Novel Alteromonas Phage Lineage with a Broad Host Range and Small Burst Size.	Yang Y, Ma R, Yu C, Ye J, Chen X, Wang L, Jiao N, Zhang R	Microbiol Spectr	10.1128/spectrum.01499-22	2022
Alteromonas portus sp. nov., an alginate lyase-excreting marine bacterium.	Huang H, Mo K, Li S, Dongmei S, Zhu J, Zou X, Hu Y, Bao S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003884	2020
Description of Alteromonas abrolhosensis sp. nov., isolated from sea water of Abrolhos Bank, Brazil.	Nobrega MS, Silva BS, Leomil L, Tschoeke DA, Campeao ME, Garcia GD, Dias GA, Vieira VV, Thompson CC, Thompson FL	Antonie Van Leeuwenhoek	10.1007/s10482-018-1016-x	2018
Alteromonas gracilis sp. nov., a marine polysaccharide-producing bacterium.	Matsuyama H, Minami H, Sakaki T, Kasahara H, Baba S, Ishimaru S, Hirota K, Yumoto I	Int J Syst Evol Microbiol	10.1099/ijs.0.000127	2015
Ecophysiological diversity of a novel member of the genus Alteromonas, and description of Alteromonas mediterranea sp. nov.	Ivanova EP, Lopez-Perez M, Zabalos M, Nguyen SH, Webb HK, Ryan J, Lagutin K, Vyssotski M, Crawford RJ, Rodriguez-Valera F	Antonie Van Leeuwenhoek	10.1007/s10482-014-0309-y	2014
Alteromonas marina sp. nov., isolated from sea water of the East Sea in Korea.	Yoon JH, Kim IG, Kang KH, Oh TK, Park YH	Int J Syst Evol Microbiol	10.1099/ijs.0.02536-0	2003

References

#2425	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6062
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40559	; Curators of the CIP;
#46448	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 16128
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120737	Collection of Institut Pasteur ; Curators of the CIP; CIP 103198
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Alteromonas macleodii (DSM 6062, ATCC 27126, CCUG 16128)

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Halophily

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