Name: Caenibacillus caldisaponilyticus B157
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132575

Type strain:

Species: Caenibacillus caldisaponilyticus

Strain Designation: B157

Culture col. no.: DSM 101100, NBRC 111400

Strain history: <- M. Miyashita, NBRC, NITE (Natl. Inst. of Technol. and Evaluation), Kisarazu, Japan; NBRC 111400 <- K. Watanabe, Graduate School of Life Environmental Sciences, Kyoto, Japan

NCBI tax ID(s): 1674942 (species)

SI-ID 400695

DSM 101100

Special Collections

Section

Caenibacillus caldisaponilyticus B157 is an aerobe, spore-forming, Gram-positive bacterium that forms circular colonies and was isolated from garbage compost processed under acidic conditions .

colony-forming
Gram-positive
rod-shaped
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Sporolactobacillaceae*
	Genus	*Caenibacillus*
	Species	**Caenibacillus caldisaponilyticus**
	Full Scientific Name (LPSN)	Caenibacillus caldisaponilyticus Tsujimoto et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43606]	Gram stain	positive

[Ref.: #43606]	Cell length	3.5-7 µm

[Ref.: #43606]	Cell width	0.6-0.7 µm

[Ref.: #43606]	Cell shape	rod-shaped

[Ref.: #43606]	Motility	no

[Ref.: #43606]	Colony size	0.5-0.8 mm
[Ref.: #43606]	Colony color	white to cream
[Ref.: #43606]	Colony shape	circular
[Ref.: #43606]	Cultivation medium used	YC medium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43606]

Culture medium

YC medium

[Ref.: #43606]

Culture medium growth

[Ref.: #24364]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #24364]

Culture medium growth

[Ref.: #24364]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24364]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #24364]	growth	55 °C
[Ref.: #43606]	growth	40-65 °C
[Ref.: #43606]	optimum	50-60 °C

	pH	Kind of pH		pH
[Ref.: #43606]			optimum	6.2
[Ref.: #43606]			growth	4.8-8.1

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43606]

Oxygen tolerance

aerobe

[Ref.: #43606]	Spore description	ellipsoidal (1.2-1.5µm x 0.8-1µm), subterminal or terminal and formed in swollen sporangia
[Ref.: #43606]	Type of spore	spore
[Ref.: #43606]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43606]		NaCl		growth	0-1.5	%(w/v)
[Ref.: #43606]		NaCl		optimum	0-1	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43606]	casein	+/-	hydrolysis
[Ref.: #43606]	gelatin ChEBI	+	hydrolysis
[Ref.: #43606]	nitrate ChEBI	-	reduction
[Ref.: #43606]	starch ChEBI	-	hydrolysis

	Metabolite production	Metabolite	Production
[Ref.: #43606]		lactate ChEBI	no

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #43606]		catalase	+	1.11.1.6
[Ref.: #43606]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24364]	Sample type/isolated from	garbage compost processed under acidic conditions (acidulocompost)
[Ref.: #24364]	Geographic location (country and/or sea, region)	Ibaraki Prefectural Oarai Aquarium, Ibaraki
[Ref.: #24364]	Country	Japan
[Ref.: #24364]	Country ISO 3 Code	JPN
[Ref.: #24364]	Continent	Asia

[Ref.: #43606]	Sample type/isolated from	acidulocompost at Ibaraki Prefectural Oarai Aquarium
[Ref.: #43606]	Geographic location (country and/or sea, region)	Ibaraki Prefecture
[Ref.: #43606]	Country	Japan
[Ref.: #43606]	Country ISO 3 Code	JPN
[Ref.: #43606]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Condition	#Acidic	-
#Engineered	#Biodegradation	#Composting

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC062711 (>99% sequence identity) for Caenibacillus caldisaponilyticus subclade from Microbeatlas

Aquatic Samples	477
Soil Samples	2067
Animal Samples	729
Plant Samples	614
Total Samples	3887

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24364]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24364]	Caenibacillus caldisaponilyticus gene for 16S ribosomal RNA, partial sequence	LC062711	1490	GenBank ENA	1674942 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Caenibacillus caldisaponilyticus B157	GCA_002003465	contig	GenBank ENA	1674942 tax ID	*
[Ref.: #66792]	Caenibacillus caldisaponilyticus B157	2786546902	draft	JGI IMG/M	1674942 tax ID	*

[Ref.: #43606]

GC-content

51.8 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #24364]

Culture collection no.

DSM 101100, NBRC 111400

[Ref.: #90892]

SI-ID 400695

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Caenibacillus caldisaponilyticus gen. nov., sp. nov., a thermophilic, spore-forming and phospholipid-degrading bacterium isolated from acidulocompost.	Tsujimoto Y, Saito R, Furuya H, Ishihara D, Sahara T, Kimura N, Nishino T, Tsuruoka N, Shigeri Y, Watanabe K	Int J Syst Evol Microbiol	10.1099/ijsem.0.001108	2016	*
Genetics	Draft Genome Sequence of Caenibacillus caldisaponilyticus B157(T), a Thermophilic and Phospholipase-Producing Bacterium Isolated from Acidulocompost.	Tsujimoto Y, Saito R, Sahara T, Kimura N, Tsuruoka N, Shigeri Y, Watanabe K	Genome Announc	10.1128/genomeA.00089-17	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24364

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101100

#43606

Yoshiyuki Tsujimoto, Ryo Saito, Hiroto Furuya, Daisuke Ishihara, Takehiko Sahara, Nobutada Kimura, Tokuzo Nishino, Naoki Tsuruoka, Yasushi Shigeri, Kunihiko Watanabe: Caenibacillus caldisaponilyticus gen. nov., sp. nov., a thermophilic, spore-forming and phospholipid-degrading bacterium isolated from acidulocompost. IJSEM 66: 2684 - 2690 2016 ( DOI 10.1099/ijsem.0.001108 , PubMed 27117268 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90892

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400695.1 )

* These data were automatically processed and therefore are not curated

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