Name: Streptomyces hyaluromycini MB-PO13
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132567

Type strain:

Species: Streptomyces hyaluromycini

Strain Designation: MB-PO13, TP-A0894

Culture col. no.: DSM 100105, NBRC 110483

Strain history: <- M. Hamada, National Institute of Technology and Evaluation, Chiba, Japan; NBRC 110483 <- C. Imada, Tokyo University of Marine Science and Technology, Japan

NCBI tax ID(s): 1377993 (species)

SI-ID 399784

DSM 100105

Section

Streptomyces hyaluromycini MB-PO13 is a spore-forming, mesophilic bacterium that was isolated from tunicate Molgula manhattensis.

spore-forming
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces hyaluromycini**
	Full Scientific Name (LPSN)	Streptomyces hyaluromycini Harunari et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %90.769

Multimedia content

[Ref.: #24356]

Caption:

Medium 65 28°C

[Ref.: #24356]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24356]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #24356]

Culture medium growth

[Ref.: #24356]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24356]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24356]			growth	28 °C

[Ref.: #24356]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %97
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24356]	Sample type/isolated from	tunicate Molgula manhattensis
[Ref.: #24356]	Host species	Molgula manhattensis
[Ref.: #24356]	Geographic location (country and/or sea, region)	Minato-ku, Tokyo Bay
[Ref.: #24356]	Country	Japan
[Ref.: #24356]	Country ISO 3 Code	JPN
[Ref.: #24356]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Tunicata

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24356]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces hyaluromycini NBRC 110483	GCA_002217755	scaffold	GenBank	1377993 tax ID	*
[Ref.: #66792]	Streptomyces hyaluromycini strain NBRC 110483	1377993.3	wgs	PATRIC	1377993 tax ID	*
[Ref.: #66792]	Streptomyces hyaluromycini NBRC 110483	2791355430	draft	JGI IMG/M	1377993 tax ID	*

[Ref.: #24356]

GC-content

73.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces hyaluromycini NBRC 110483 NCBI: GCA_002217755.1
[Ref.: #69481]	spore-forming	yes	97	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces hyaluromycini NBRC 110483 NCBI: GCA_002217755.1
[Ref.: #69480]	flagellated	no	98.095	no
[Ref.: #69480]	gram-positive	yes	84.988	no
[Ref.: #69480]	anaerobic	no	99.253	no
[Ref.: #69480]	aerobic	yes	92.336	no
[Ref.: #69480]	halophile	no	95.741	no
[Ref.: #69480]	spore-forming	yes	91.912	no
[Ref.: #69480]	thermophile	no	98.897	yes
[Ref.: #69480]	glucose-util	yes	89.302	no
[Ref.: #69480]	motile	no	94.444	no
[Ref.: #69480]	glucose-ferment	no	87.743	no

Availability in culture collections External links

[Ref.: #24356]

Culture collection no.

DSM 100105, NBRC 110483

[Ref.: #90884]

SI-ID 399784

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Konamycins A and B and Rubromycins CA1 and CA2, Aromatic Polyketides from the Tunicate-Derived Streptomyces hyaluromycini MB-PO13(T).	Harunari E, Imada C, Igarashi Y	J Nat Prod	10.1021/acs.jnatprod.9b00107	2019	*
Genetics	Draft genome sequence of Streptomyces hyaluromycini MB-PO13(T), a hyaluromycin producer.	Harunari E, Komaki H, Ichikawa N, Hosoyama A, Kimura A, Hamada M, Igarashi Y	Stand Genomic Sci	10.1186/s40793-017-0286-7	2018	*
Phylogeny	Streptomyces hyaluromycini sp. nov., isolated from a tunicate (Molgula manhattensis).	Harunari E, Hamada M, Shibata C, Tamura T, Komaki H, Imada C, Igarashi Y	J Antibiot (Tokyo)	10.1038/ja.2015.110	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24356

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100105

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#90884

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399784.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces hyaluromycini in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Streptomyces hyaluromycini NBRC 110483

Streptomyces hyaluromycini NBRC 110483

Change proposal

Change proposal