Name: Bacillus mesophilus SA4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132541

Type strain:

Species: Bacillus mesophilus

Strain Designation: SA4

Culture col. no.: DSM 101000, CCTCC AB 2015209

Strain history: <- G. Liu, Fujian Academy of Agricultural Sciences, Fuzhou, China; SA4

NCBI tax ID(s): 1808955 (species)

SI-ID 402642

DSM 101000

Special Collections

DSMZ

Section

Bacillus mesophilus SA4 is a spore-forming, motile bacterium that was isolated from soil from an abandoned marine solar saltern.

motile
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Bacillus*
	Species	**Bacillus mesophilus**
	Full Scientific Name (LPSN)	Bacillus mesophilus Zhou et al. 2017

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24330]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #24330]

Culture medium growth

[Ref.: #24330]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24330]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24330]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %95.029
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24330]	Sample type/isolated from	soil from an abandoned marine solar saltern
[Ref.: #24330]	Geographic location (country and/or sea, region)	Shandong Province, Wendeng (122° 0' 21.59'' E, 36° 69' 52.82'' N)
[Ref.: #24330]	Country	China
[Ref.: #24330]	Country ISO 3 Code	CHN
[Ref.: #24330]	Continent	Asia
[Ref.: #24330]	Geographic location	38.6172°/122.6000°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24330]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24330]	Bacillus mesophilus strain SA4 16S ribosomal RNA gene, partial sequence	KU324461	1501	GenBank ENA	1808955 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus mesophilus DSM 101000	GCA_016908955	contig	GenBank ENA	1808955 tax ID	*
[Ref.: #66792]	Bacillus mesophilus SA4	GCA_011008845	contig	GenBank ENA	1808955 tax ID	*
[Ref.: #66792]	Bacillus mesophilus strain DSM 101000	1808955.6	wgs	PATRIC	1808955 tax ID	*
[Ref.: #66792]	Bacillus mesophilus DSM 101000	2901236122	draft	JGI IMG/M	1808955 tax ID	*

[Ref.: #24330]

GC-content

42.4 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Bacillus mesophilus strain DSM 101000 PATRIC: 1808955.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus mesophilus strain DSM 101000 PATRIC: 1808955.6
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	72.227	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.363	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	95.029	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	66.18	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	89.268	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	88.117	no

Availability in culture collections External links

[Ref.: #24330]

Culture collection no.

DSM 101000, CCTCC AB 2015209

[Ref.: #90866]

SI-ID 402642

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Bacillus mesophilus sp. nov., an alginate-degrading bacterium isolated from a soil sample collected from an abandoned marine solar saltern.	Zhou YX, Liu GH, Liu B, Chen GJ, Du ZJ	Antonie Van Leeuwenhoek	10.1007/s10482-016-0692-7	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24330

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101000

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#90866

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402642.1 )

* These data were automatically processed and therefore are not curated

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Bacillus mesophilus strain DSM 101000

Bacillus mesophilus strain DSM 101000

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