Name: Oceanobacillus endoradicis py1294
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132542

Type strain:

Species: Oceanobacillus endoradicis

Strain Designation: py1294

Culture col. no.: DSM 100726

Strain history: <- S.-K. Tang, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; py1294 <- L.-L. Yang

NCBI tax ID(s): 1805671 (species)

SI-ID 400718

DSM 100726

Special Collections

DSMZ

Section

Oceanobacillus endoradicis py1294 is a bacterium that was isolated from roots of Paris polyphylla var. yunnanensis.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Oceanobacillus*
	Species	**Oceanobacillus endoradicis**
	Full Scientific Name (LPSN)	Oceanobacillus endoradicis Yang et al. 2021

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24331]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #24331]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24331]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24331]	Sample type/isolated from	roots of Paris polyphylla var. yunnanensis
[Ref.: #24331]	Host species	Paris polyphylla var. yunnanensis
[Ref.: #24331]	Geographic location (country and/or sea, region)	Yunnan province
[Ref.: #24331]	Country	China
[Ref.: #24331]	Country ISO 3 Code	CHN
[Ref.: #24331]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KU189324 (>99% sequence identity) for Oceanobacillus endoradicis subclade from Microbeatlas

Aquatic Samples	5
Soil Samples	18
Animal Samples	5
Plant Samples	1
Total Samples	29

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24331]	Oceanobacillus endoradicis 16S ribosomal RNA gene, partial sequence	KU189324	1492	GenBank ENA	1805671 tax ID

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GC-content

42.3 mol%

Availability in culture collections External links

[Ref.: #24331]

Culture collection no.

DSM 100726

[Ref.: #90867]

SI-ID 400718

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Oceanobacillus endoradicis sp. nov., an endophytic bacterial species isolated from the root of Paris polyphylla Smith var. yunnanensis.	Yang LL, Tang SK, Chu X, Jiang Z, Xu LH, Zhi XY	Antonie Van Leeuwenhoek	10.1007/s10482-016-0695-4	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24331

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100726

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90867

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400718.1 )

* These data were automatically processed and therefore are not curated

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