Name: Micromonospora oryzae CP2R9-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132273

Type strain:

Species: Micromonospora oryzae

Strain Designation: CP2R9-1

Culture col. no.: DSM 102119, BCC 67266, NBRC 110007

Strain history: <- NBRC; NBRC 110007 <- BCC; BCC 67266 <- C. Thawai; CP2R9-1

NCBI tax ID(s): 1530046 (species)

SI-ID 400427

DSM 102119

Section

Micromonospora oryzae CP2R9-1 is a mesophilic bacterium that was isolated from Root internal tissues ,Oryza sativa.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Micromonospora*
	Species	**Micromonospora oryzae**
	Full Scientific Name (LPSN)	Micromonospora oryzae Kittiwongwattana et al. 2015

Information on morphological and physiological properties Morphology

Multimedia content

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Intellectual property rights:

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Caption:

Medium 554 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24062]			growth	28 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24062]	Sample type/isolated from	Root internal tissues ,Oryza sativa
[Ref.: #24062]	Host species	Oryza sativa
[Ref.: #24062]	Geographic location (country and/or sea, region)	Chumporn
[Ref.: #24062]	Country	Thailand
[Ref.: #24062]	Country ISO 3 Code	THA
[Ref.: #24062]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24062]	Micromonospora oryzae gene for 16S ribosomal RNA, partial sequence	AB981052	1502	ENA	1530046 tax ID

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GC-content

73.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24062]

Culture collection no.

DSM 102119, BCC 67266, NBRC 110007

[Ref.: #90620]

SI-ID 400427

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	In Silico Analysis of PKS and NRPS Gene Clusters in Arisostatin- and Kosinostatin-Producers and Description of Micromonospora okii sp. nov.	Komaki H, Ichikawa N, Hosoyama A, Hamada M, Igarashi Y	Antibiotics (Basel)	10.3390/antibiotics10121447	2021	*
Phylogeny	Micromonospora oryzae sp. nov., isolated from roots of upland rice.	Kittiwongwattana C, Thanaboripat D, Laosinwattana C, Koohakan P, Parinthawong N, Thawai C	Int J Syst Evol Microbiol	10.1099/ijsem.0.000500	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24062

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102119

#90620

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400427.1 )

* These data were automatically processed and therefore are not curated

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