Name: Luteolibacter arcticus MC 3726
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132211

Type strain:

Species: Luteolibacter arcticus

Strain Designation: MC 3726

Culture col. no.: DSM 102244, CCTCC AB 2014275

Strain history: <- M. Kim, CCTCC; CCTCC AB2014275

NCBI tax ID(s): 1581411 (species)

SI-ID 396955

DSM 102244

Special Collections

DSMZ

Section

Luteolibacter arcticus MC 3726 is a bacterium that was isolated from high Arctic tundra near the settlement Ny-A°lesund.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Verrucomicrobiota*
	Class	*Verrucomicrobiia*
	Order	*Verrucomicrobiales*
	Family	*Verrucomicrobiaceae*
	Genus	*Luteolibacter*
	Species	**Luteolibacter arcticus**
	Full Scientific Name (LPSN)	Luteolibacter arcticus Kim et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %91.995

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24000]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #24000]

Culture medium growth

[Ref.: #24000]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24000]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24000]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24000]	Sample type/isolated from	high Arctic tundra near the settlement Ny-A°lesund
[Ref.: #24000]	Geographic location (country and/or sea, region)	Svalbard Archipelago
[Ref.: #24000]	Country	Norway
[Ref.: #24000]	Country ISO 3 Code	NOR
[Ref.: #24000]	Continent	Europe
[Ref.: #24000]	Geographic location	78.8833°/12.1500°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Tundra
#Climate	#Cold	#Polar

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KP101281 (>99% sequence identity) for Luteolibacter arcticus subclade from Microbeatlas

Aquatic Samples	79
Soil Samples	41
Animal Samples	4
Plant Samples	24
Total Samples	148

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24000]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24000]	Luteolibacter arcticus strain MC 3726 16S ribosomal RNA gene, partial sequence	KP101281	1443	GenBank ENA	1581411 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Luteolibacter arcticus CCTCC AB 2014275	GCA_025950235	contig	GenBank ENA	1581411 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Luteolibacter arcticus CCTCC AB 2014275 NCBI: GCA_025950235.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	91.995	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	92.348	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	77.837	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	82.533	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.427	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	74.935	no

Availability in culture collections External links

[Ref.: #24000]

Culture collection no.

DSM 102244, CCTCC AB 2014275

[Ref.: #90564]

SI-ID 396955

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteolibacter luteus sp. nov., isolated from stream bank soil.	Dahal RH, Chaudhary DK, Kim DU, Kim J	Arch Microbiol	10.1007/s00203-020-02048-x	2020	*
Phylogeny	Luteolibacter flavescens sp. nov., isolated from deep seawater.	Zhang C, Dong B, Wang R, Su Y, Han S, Yu X, Zhao Z, Fu G, Sun C, Wu M	Int J Syst Evol Microbiol	10.1099/ijsem.0.001713	2017	*
Phylogeny	Luteolibacter arcticus sp. nov., isolated from high Arctic tundra soil, and emended description of the genus Luteolibacter.	Kim M, Pak S, Rim S, Ren L, Jiang F, Chang X, Liu P, Zhang Y, Fang C, Zheng C, Peng F	Int J Syst Evol Microbiol	10.1099/ijs.0.000202	2015	*
Phylogeny	Luteolibacter marinus sp. nov., a novel bacterium in the family Verrucomicrobiaceae, isolated from marine sediment.	Xie F, Zhu S, Guo C, Liu X, He S, Zhang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.005544	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24000

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102244

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90564

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396955.1 )

* These data were automatically processed and therefore are not curated

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Luteolibacter arcticus CCTCC AB 2014275

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