Xylella fastidiosa (DSM 103417, ATCC 35870, LMG 15099)

Name: Xylella fastidiosa (DSM 103417, ATCC 35870, LMG 15099)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132106

Type strain

Strain Designation ALS-BC

Culture col. no. DSM 103417 ATCC 35870 LMG 15099 ALS-BC

NCBI tax ID(s) 2371

Special Collections DSMZ

History <- BCCM/LMG <- J. Hartung, Fruit Laboratory, Agricultural Research Service, USDA, Beltsville Agricultural Research Center, USA <- ATCC <- J. Wells, J. M. Wells, Agricultural Research Service, USDA, Rutgers University New Brunswick, USA; <- B. C. Raju

Links

Xylella fastidiosa ALS-BC is a plant pathogen that was isolated from almond plant.

plant pathogen 16S sequence Bacteria

Name and taxonomic classification

SI-ID 10389

LMG 9064,ATCC 35876,ICMP 8745,LMG 15099,ATCC 35870,CFBP 8082,DSM 103417

@ref 20215

Last LPSN update 2026-02-09 11:31:38

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Lysobacterales

Family Lysobacteraceae

Genus Xylella

Species Xylella fastidiosa

Full scientific name Xylella fastidiosa Wells et al. 1987

Synonyms (1)

"Xylella fastidiosa subsp. piercei"

BacDive ID	Other strains from **Xylella fastidiosa** (2)	Type strain
17622	X. fastidiosa 2683 PCE-RR, DSM 10026, ATCC 35879, CFBP ... (type strain)
132105	X. fastidiosa Wells 2691, DSM 103369, ATCC 35869, CFBP ...

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
23896	BOSEA MEDIUM (DSMZ Medium 1052)		Medium recipe at MediaDive	Name: BOSEA MEDIUM (DSMZ Medium 1052) Composition: Agar 15.0 g/l ACES 10.0 g/l Yeast extract 10.0 g/l Activated charcoal 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
23896	positive	growth	28

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	+	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
23896	-	-	+	-	+/-	+/-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Tree

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
23896	almond (Prunus dulcis) plant	Prunus dulcis	California	USA	USA	North America

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
23896		1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Xylella fastidiosa isolate 6746 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile, and tRNA-Ala genes, complete sequence.	AY388465	510		2371
124043	Xylella fastidiosa isolate ALS-BC 16S ribosomal gene, partial sequence.	AF536770	1454		2371

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	New Coffee Plant-Infecting Xylella fastidiosa Variants Derived via Homologous Recombination.	Jacques MA, Denance N, Legendre B, Morel E, Briand M, Mississipi S, Durand K, Olivier V, Portier P, Poliakoff F, Crouzillat D.	Appl Environ Microbiol	10.1128/aem.03299-15	2015
Enzymology	Detection and diversity assessment of Xylella fastidiosa in field-collected plant and insect samples by using 16S rRNA and gyrB sequences.	Rodrigues JL, Silva-Stenico ME, Gomes JE, Lopes JR, Tsai SM.	Appl Environ Microbiol	10.1128/aem.69.7.4249-4255.2003	2003
Genetics	Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.	Van Sluys MA, de Oliveira MC, Monteiro-Vitorello CB, Miyaki CY, Furlan LR, Camargo LE, da Silva AC, Moon DH, Takita MA, Lemos EG, Machado MA, Ferro MI, da Silva FR, Goldman MH, Goldman GH, Lemos MV, El-Dorry H, Tsai SM, Carrer H, Carraro DM, de Oliveira RC, Nunes LR, Siqueira WJ, Coutinho LL, Kimura ET, Ferro ES, Harakava R, Kuramae EE, Marino CL, Giglioti E, Abreu IL, Alves LM, do Amaral AM, Baia GS, Blanco SR, Brito MS, Cannavan FS, Celestino AV, da Cunha AF, Fenille RC, Ferro JA, Formighieri EF, Kishi LT, Leoni SG, Oliveira AR, Rosa VE, Sassaki FT, Sena JA, de Souza AA, Truffi D, Tsukumo F, Yanai GM, Zaros LG, Civerolo EL, Simpson AJ, Almeida NF, Setubal JC, Kitajima JP.	J Bacteriol	10.1128/jb.185.3.1018-1026.2003	2003

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23896	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103417
#68369	Automatically annotated from API 20NE .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Xylella fastidiosa (DSM 103417, ATCC 35870, LMG 15099)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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