Name: Xylella fastidiosa ALS-BC
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132106

Type strain:

Species: Xylella fastidiosa

Strain Designation: ALS-BC

Culture col. no.: DSM 103417, ATCC 35870, LMG 15099

Strain history: <- BCCM/LMG <- J. Hartung, Fruit Laboratory, Agricultural Research Service, USDA, Beltsville Agricultural Research Center, USA <- ATCC <- J. Wells, J. M. Wells, Agricultural Research Service, USDA, Rutgers University New Brunswick, USA; <- B. C. Raju

NCBI tax ID(s): 2371 (species)

SI-ID 10389

LMG 9064, ATCC 35876, ICMP 8745, LMG 15099, ATCC 35870, CFBP 8082, DSM 103417

Special Collections

DSMZ

Other strains from Xylella fastidiosa

Section

Xylella fastidiosa ALS-BC is a plant pathogen that was isolated from almond plant.

plant pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Xylella*
	Species	**Xylella fastidiosa**
	Full Scientific Name (LPSN)	Xylella fastidiosa Wells et al. 1987

Synonym

"Xylella fastidiosa subsp. piercei"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23896]

Culture medium

BOSEA MEDIUM (DSMZ Medium 1052)

[Ref.: #23896]

Culture medium growth

[Ref.: #23896]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23896]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23896]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	fermentation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #23896]	25217	-	-	+	-	+/-	+/-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23896]	Sample type/isolated from	almond (Prunus dulcis) plant
[Ref.: #23896]	Host species	Prunus dulcis
[Ref.: #23896]	Geographic location (country and/or sea, region)	California
[Ref.: #23896]	Country	USA
[Ref.: #23896]	Country ISO 3 Code	USA
[Ref.: #23896]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host

#Plants

#Tree

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #23896]	Pathogenicity (plant)	yes
[Ref.: #23896]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	Xylella fastidiosa isolate 6746 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile, and tRNA-Ala genes, complete sequence.	AY388465	510	GenBank ENA	2371 tax ID	*

Availability in culture collections External links

[Ref.: #23896]

Culture collection no.

DSM 103417, ATCC 35870, LMG 15099

[Ref.: #90462]

SI-ID 10389

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23896

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103417

#68369

Automatically annotated from API 20NE .

#90462

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID10389.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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