Name: Lederbergia wuyishanensis FJAT-17212
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131356

Type strain:

Species: Lederbergia wuyishanensis

Strain Designation: FJAT-17212

Culture col. no.: DSM 27848, CGMCC 1.12709

Strain history: <- G. Liu, Fujian Academy of Agricultural Sciences, Fuzhou, China; FJAT-17212

NCBI tax ID(s): 1347903 (species)

SI-ID 405323

DSM 27848

Special Collections

DSMZ

Section

Lederbergia wuyishanensis FJAT-17212 is a bacterium that was isolated from rhizosphere soil of the medical plant Prunella vulgaris .

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Lederbergia*
	Species	**Lederbergia wuyishanensis**
	Full Scientific Name (LPSN)	Lederbergia wuyishanensis (Liu et al. 2015) Gupta et al. 2020

Synonym

Bacillus wuyishanensis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22583]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #22583]

Culture medium growth

[Ref.: #22583]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22583]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22583]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22583]	Sample type/isolated from	rhizosphere soil of the medical plant Prunella vulgaris (common selfheal)
[Ref.: #22583]	Host species	Prunella vulgaris
[Ref.: #22583]	Geographic location (country and/or sea, region)	Wuyishan mountain, Fujian Province (27° 44' 4.27'' N, 117° 38' 8.11'' E, at an altitude of 1147 m)
[Ref.: #22583]	Country	China
[Ref.: #22583]	Country ISO 3 Code	CHN
[Ref.: #22583]	Continent	Asia
[Ref.: #22583]	Geographic location	27.7345°/117.6360°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF040589 (>99% sequence identity) for Lederbergia wuyishanensis from Microbeatlas

Aquatic Samples	56
Soil Samples	233
Animal Samples	42
Plant Samples	16
Total Samples	347

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22583]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22583]	Lederbergia wuyishanensis strain FJAT-17212 16S ribosomal RNA gene, partial sequence	KF040589	1440	GenBank ENA	1347903 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus wuyishanensis DSM 27848	2926597067	draft	JGI IMG/M	1347903 tax ID	*
[Ref.: #66792]	Lederbergia wuyishanensis CGMCC 1.12709	GCA_022900255	contig	GenBank ENA	1347903 tax ID	*

[Ref.: #22583]

GC-content

39.8 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #22583]

Culture collection no.

DSM 27848, CGMCC 1.12709

[Ref.: #89796]

SI-ID 405323

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus wuyishanensis sp. nov., isolated from rhizosphere soil of a medical plant, Prunella vulgaris.	Liu B, Liu GH, Sengonca C, Schumann P, Che JM, Zhu YJ, Wang JP	Int J Syst Evol Microbiol	10.1099/ijs.0.000215	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22583

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27848

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89796

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405323.1 )

* These data were automatically processed and therefore are not curated

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