Nocardioides marmoraquaticus (DSM 28169, CBMAI 1089, JCM 31977)

Name: Nocardioides marmoraquaticus (DSM 28169, CBMAI 1089, JCM 31977)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131355

Type strain

Strain Designation B374

Culture col. no. DSM 28169 CBMAI 1089 JCM 31977 B374

NCBI tax ID(s) 1087253

Special Collections DSMZ JCM

Links

Nocardioides marmoraquaticus B374 is a mesophilic prokaryote that was isolated from marine sponge Glodia corticostylifera.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 401035

JCM 31977,CBMAI 1089,DSM 28169

@ref 20215

Last LPSN update 2025-12-16 10:01:13

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Nocardioidaceae

Genus Nocardioides

Species Nocardioides marmoraquaticus

Full scientific name Nocardioides marmoraquaticus Wang et al. 2023

Synonyms (1)

Marmoricola aquaticus

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
22582	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
22582	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
22582	GLYCEROL-YEAST EXTRACT-PEPTONE MEDIUM (DSMZ Medium 1484)	Medium recipe at MediaDive	Name: Glycerol-Yeast extract-Peptone Medium (DSMZ Medium 1484) Composition: Agar 15.0 g/l Yeast extract 5.0 g/l Bacto peptone 3.0 g/l Betaine 1.25 g/l Sodium pyruvate 1.25 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l MnSO4 x H2O 0.005 g/l ZnSO4 x 7 H2O 0.0018 g/l CoSO4 x 7 H2O 0.0018 g/l FeSO4 x 7 H2O 0.001 g/l CaCl2 x 2 H2O 0.001 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l Pyridoxine hydrochloride 0.0001 g/l Na2MoO4 x 2 H2O 0.0001 g/l H3BO3 0.0001 g/l CuSO4 x 5 H2O 0.0001 g/l (DL)-alpha-Lipoic acid 5e-05 g/l p-Aminobenzoic acid 5e-05 g/l Calcium D-(+)-pantothenate 5e-05 g/l Nicotinic acid 5e-05 g/l Riboflavin 5e-05 g/l Thiamine HCl 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l Vitamin B12 1e-06 g/l Glycerol Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
22582	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Observation

67770

Observationquinones: MK-8(H₄)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Porifera (Sponges)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
22582	marine sponge Glodia corticostylifera	Glodia corticostylifera	Sao Paulo	Brazil	BRA	Middle and South America
67770	Marine sponge, Glodia corticostylifera	Glodia corticostylifera	São Paulo	Brazil	BRA	Middle and South America

Taxonmaps

69479

Global distribution of 16S sequence JN615437 (>99% sequence identity) for Marmoricola from Microbeatlas

Aquatic Samples	109
Soil Samples	279
Animal Samples	599
Plant Samples	40
Total Samples	1027

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22582	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22582	Nocardioides marmoraquaticus strain B374 16S ribosomal RNA gene, partial sequence	JN615437	1428		1087253

GC content

@ref	GC-content (mol%)	Method
22582	74.3	fluorimetric
67770	74.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marmoricola aquaticus sp. nov., an actinomycete isolated from a marine sponge.	de Menezes CBA, Tonin MF, Silva LJ, de Souza WR, Parma M, de Melo IS, Zucchi TD, Destefano SAL, Fantinatti-Garboggini F	Int J Syst Evol Microbiol	10.1099/ijs.0.000254	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22582	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28169
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Nocardioides marmoraquaticus (DSM 28169, CBMAI 1089, JCM 31977)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media