Name: Lysobacter capsici 6.2.3
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130777

Type strain:

Species: Lysobacter capsici

Strain Designation: 6.2.3

Culture col. no.: DSM 23113

Strain history: <- A. F. Yassin, Inst. Med. Mikrobiol., Univ. Bonn, Germany; 6.2.3 <- J. Postma, Plant Res. International, Wageningen, Netherlands

NCBI tax ID(s): 435897 (species)

SI-ID 398849

DSM 23113

Special Collections

DSMZ

Other strains from Lysobacter capsici

Section

Lysobacter capsici 6.2.3 is a bacterium that was isolated from clay soil of grassland.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Lysobacter*
	Species	**Lysobacter capsici**
	Full Scientific Name (LPSN)	Lysobacter capsici Park et al. 2008

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #21644]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21644]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #21644]

Culture medium growth

[Ref.: #21644]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21644]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21644]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21644]	Sample type/isolated from	clay soil of grassland
[Ref.: #21644]	Geographic location (country and/or sea, region)	Hensbroek
[Ref.: #21644]	Country	Netherlands
[Ref.: #21644]	Country ISO 3 Code	NLD
[Ref.: #21644]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Grassland
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FN357196 (>99% sequence identity) for Lysobacter from Microbeatlas

Aquatic Samples	1340
Soil Samples	9924
Animal Samples	1424
Plant Samples	3890
Total Samples	16578

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21644]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21644]	Lysobacter capsici partial 16S rRNA gene, strain 6.2.3	FN357196	1510	GenBank ENA	435897 tax ID

Availability in culture collections External links

[Ref.: #21644]

Culture collection no.

DSM 23113

[Ref.: #89273]

SI-ID 398849

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21644

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23113

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89273

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398849.1 )

* These data were automatically processed and therefore are not curated

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