Name: Lysobacter capsici strain 10.4.5
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17494

Type strain:

Species: Lysobacter capsici

Strain Designation: strain 10.4.5, 10.4.5

Culture col. no.: DSM 23109

Strain history: <- A. F. Yassin, Inst. Med. Mikrobiol., Univ. Bonn, Germany; strain 10.4.5 <- J. Postma, Plant Res. International, Wageningen, Netherlands

NCBI tax ID(s): 435897 (species)

SI-ID 400448

DSM 23109

Other strains from Lysobacter capsici

L. capsici YC5194, DSM 19286, KCTC 22007 (type strain)
L. capsici 55, DSM 23110
L. capsici 1.3.3, DSM 23114
L. capsici 6.2.3, DSM 23113

Section

Lysobacter capsici strain 10.4.5 is a mesophilic bacterium that was isolated from clay soil of a grass.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Lysobacter*
	Species	**Lysobacter capsici**
	Full Scientific Name (LPSN)	Lysobacter capsici Park et al. 2008

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #16701]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16701]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16701]			growth	28 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16701]	Sample type/isolated from	clay soil of a grass
[Ref.: #16701]	Geographic location (country and/or sea, region)	Marknesse
[Ref.: #16701]	Country	Netherlands
[Ref.: #16701]	Country ISO 3 Code	NLD
[Ref.: #16701]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

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Global distribution of 16S sequence FN357197 (>99% sequence identity) for Lysobacter from Microbeatlas

Aquatic Samples	1340
Soil Samples	9924
Animal Samples	1424
Plant Samples	3890
Total Samples	16578

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16701]	Lysobacter capsici partial 16S rRNA gene, strain 10.4.5	FN357197	1485	ENA	435897 tax ID

Availability in culture collections External links

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Culture collection no.

DSM 23109

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SI-ID 400448

References

#16701

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23109

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86491

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400448.1 )

* These data were automatically processed and therefore are not curated

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