Name: Streptomyces cyslabdanicus K04-0144
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130712

Type strain:

Species: Streptomyces cyslabdanicus

Strain Designation: K04-0144

Culture col. no.: DSM 42135, NBRC 110081

Strain history: <- A. Matsumoto, Kitasato Universitiy. Tokyo; K04-0144

NCBI tax ID(s): 1470456 (species)

SI-ID 404779

DSM 42135

Section

Streptomyces cyslabdanicus K04-0144 is a mesophilic bacterium that was isolated from soil collected under a tree.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces cyslabdanicus**
	Full Scientific Name (LPSN)	Streptomyces cyslabdanicus Také et al. 2015

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21945]			growth	28 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

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Name of produced compound

cyslabdan

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21945]	Sample type/isolated from	soil collected under a tree
[Ref.: #21945]	Geographic location (country and/or sea, region)	Okinawa prefecture, Ishigaki Island
[Ref.: #21945]	Country	Japan
[Ref.: #21945]	Country ISO 3 Code	JPN
[Ref.: #21945]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Tree

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21945]	Streptomyces cyslabdanicus gene for 16S ribosomal RNA, partial sequence	AB915216	1484	ENA	1470456 tax ID

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GC-content

73 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

DSM 42135, NBRC 110081

[Ref.: #89219]

SI-ID 404779

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Biosynthesis of mercapturic acid derivative of the labdane-type diterpene, cyslabdan that potentiates imipenem activity against methicillin-resistant Staphylococcus aureus: cyslabdan is generated by mycothiol-mediated xenobiotic detoxification.	Ikeda H, Shin-Ya K, Nagamitsu T, Tomoda H	J Ind Microbiol Biotechnol	10.1007/s10295-015-1694-6	2015	*
Pathogenicity	New Approaches to Drug Discovery for Combating MRSA.	Tomoda H	Chem Pharm Bull (Tokyo)	10.1248/cpb.c15-00743	2016	*
Phylogeny	Streptomyces lactacystinicus sp. nov. and Streptomyces cyslabdanicus sp. nov., producing lactacystin and cyslabdan, respectively.	Take A, Matsumoto A, Omura S, Takahashi Y	J Antibiot (Tokyo)	10.1038/ja.2014.162	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21945

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42135

#89219

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404779.1 )

* These data were automatically processed and therefore are not curated

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