Rhodococcus ruber (DSM 46852, CECT 8555, EE1)

Name: Rhodococcus ruber (DSM 46852, CECT 8555, EE1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130483

Type strain

Strain Designation EE1

Culture col. no. DSM 46852 CECT 8555 EE1

NCBI tax ID(s) 1830

Special Collections DSMZ

History DSMZ <- C. Pozo-Llorente, Univ. of Granada, Spain; EE1 <- J. Purswani, Univ. of Granada, Spain

Links

Rhodococcus ruber EE1 is a bacterium that was isolated from MTBE remediating biofilter groundwater.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 394871

DSM 46852,CECT 8555

@ref 20215

Last LPSN update 2026-05-29 08:37:23

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Rhodococcus

Species Rhodococcus ruber

Full scientific name Rhodococcus ruber (Kruse 1896) Goodfellow and Alderson 1977 (Approved Lists 1980)

Synonyms (2)

"Streptothrix rubra"
Rhodococcus electrodiphilus

BacDive ID	Other strains from **Rhodococcus ruber** (72)	Type strain
10927	R. ruber M-1, N361, A-0205, CCUG 51069, DSM 43338, ... (type strain)
10921	R. ruber An213, DSM 6264, IMET 7643
10922	R. ruber Sm-1, DSM 7511, ATCC 51239
10923	R. ruber Wrink, DSM 7512
10924	R. ruber Propb, DSM 8425
10925	R. ruber Pellegrino 327, DSM 43232, SN 5101
10926	R. ruber N324, DSM 43335, ATCC 15998, CCUG 23602, ...
10928	R. ruber Pellegrino 330, DSM 43560, SN 5102
10929	R. ruber DSM 43561, SN 5108
10930	R. ruber DSM 43562, SN 5109
10931	R. ruber DSM 43563, SN 5110
10932	R. ruber DSM 43564, SN 5202
10933	R. ruber DSM 43565, SN 5203
10934	R. ruber DSM 43566, SN 5204
10935	R. ruber DSM 43567, SN 5205
10936	R. ruber DSM 43571, CBS 245.53, SN 6000
10937	R. ruber 81 N grün, DSM 43588
10938	R. ruber 81 N Mo, DSM 43589
10939	R. ruber NI, N_I, DSM 43594
10940	R. ruber NIIa, N_I_I_a, ...
10941	R. ruber N453, DSM 43961
10942	R. ruber 219, DSM 44190
10943	R. ruber S679, ES3-T, FH2170, FERM-P 3374, DSM 44319, ...
10944	R. ruber CD4=CD+1-4II, CD4=CD⁺₁-4II, ...
10945	R. ruber CD4, DSM 44495
10946	R. ruber SM 1790, TB1, DSM 44539
10947	R. ruber EH1, SM1789, DSM 44540
10949	R. ruber ES 1-T, FERM-P 2882, DSM 44755, ATCC 31191, ...
10950	R. ruber DSM 44758
10951	R. ruber 373, N 123, DSM 46008, CBS 334.51, CCM 198, ...
10952	R. ruber 906B, Casenuovo, Inst. Sup, Gdf N325, Casenuovo, ...
10953	R. ruber McClung M-122, DSM 46043, CIP 104660, IMET ...
10954	R. ruber B113, DSM 46646, IMET 7358
10955	R. ruber Chol-4, DSM 45280
10956	R. ruber C208, DSM 45332
127724	R. ruber STI07438(IMET), M-192, 23024,
127725	R. ruber STI07608(IMET), 23022, M-122,
127726	R. ruber STH00026, HKI 0026
127727	R. ruber STH00027, HKI 0027
127728	R. ruber STI07296(IMET), N73,
127729	R. ruber STI07334(IMET), SR,
127730	R. ruber STI07335(IMET), MordarskaSO,
127731	R. ruber STI07339(IMET), Mordarska330,
127732	R. ruber STI07340(IMET), Mordarska906B,
127733	R. ruber STI07341(IMET), Mordarska906,
127734	R. ruber STI07342(IMET), Budapest,
127735	R. ruber STI07345(IMET), Praga II,
127738	R. ruber STI07350, SN 5105
127739	R. ruber STI07353, SN 5107
127743	R. ruber STI07357, SN 5111
127744	R. ruber STI07286(IMET), N28,
127746	R. ruber STI07310(IMET), N363,
127747	R. ruber STI07337(IMET), N422, IMET 7337
127748	R. ruber STI07338(IMET), Mordarska327,
127749	R. ruber STI07343(IMET), Rokitnica,
127750	R. ruber STI07344(IMET), IG,
127751	R. ruber STI07351, SN 5106
127752	R. ruber STI07352, SN 5106
127754	R. ruber ST004880, IMET 07000
127755	R. ruber STH00025, HKI 0025
127756	R. ruber STI07348, SN 5103
127757	R. ruber STI07349, SN 5104
130482	R. ruber A5, DSM 46851, CECT 8556
130484	R. ruber EE6, DSM 46853, CECT 8612
136328	R. ruber CIP 104637, CCUG 23577, PCM 2171
136331	R. ruber CIP 104640, CCUG 20988
151928	R. ruber CCUG 45236
178958	R. ruber IMET 07346, STI07346
178960	R. ruber IMET 07354, STI07354
178959	R. ruber IMET 07347, STI07347
178961	R. ruber IMET 07355, STI07355
178962	R. ruber IMET 07356, STI07356

Morphology

Multimedia

@ref:	21690
multimedia content:	DSM_46852.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_46852.jpg
caption:	Medium 535 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21690	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
21690	positive	growth	28

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Bioremediation	#Biofilter
#Environmental	#Aquatic	#Groundwater

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21690	MTBE remediating biofilter groundwater	Granada	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence KC625549 (>99% sequence identity) for Rhodococcus from Microbeatlas

Aquatic Samples	725
Soil Samples	1219
Animal Samples	950
Plant Samples	247
Total Samples	3141

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21690	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21690	Rhodococcus ruber strain EE1 16S ribosomal RNA gene, partial sequence	KC625549	1435		1830

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Cultivation	Toxicity and biofilm-based selection for methyl tert-butyl ether bioremediation technology.	Guisado IM, Purswani J, Caton-Alcubierre L, Gonzalez-Lopez J, Pozo C	Water Sci Technol	10.2166/wst.2016.461	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21690	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46852
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Rhodococcus ruber (DSM 46852, CECT 8555, EE1)

Name and taxonomic classification

Morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

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