Name: Sinomonas susongensis A31
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130438

Type strain:

Species: Sinomonas susongensis

Strain Designation: A31

Culture col. no.: DSM 28245, CCTCC AB 2014068, JCM 31752

Strain history: CCTCC AB 2014068 <-- Z. Huang; Nanjing Agric. Univ., China; A31.

NCBI tax ID(s): 1324851 (species)

SI-ID 404603

DSM 28245

Special Collections

DSMZ
JCM

Section

Sinomonas susongensis A31 is a bacterium that was isolated from surface of weathered biotite.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Sinomonas*
	Species	**Sinomonas susongensis**
	Full Scientific Name (LPSN)	Sinomonas susongensis Bao et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22069]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #22069]

Culture medium growth

[Ref.: #22069]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22069]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22069]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

no Confidence in %98

[Ref.: #67770]

Observation

quinones: MK-9(H₂), MK-10(H₂)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22069]	Sample type/isolated from	surface of weathered biotite
[Ref.: #22069]	Geographic location (country and/or sea, region)	Anhui Province, Susong
[Ref.: #22069]	Country	China
[Ref.: #22069]	Country ISO 3 Code	CHN
[Ref.: #22069]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Surface of weathered biotite
[Ref.: #67770]	Geographic location (country and/or sea, region)	Susong, Anhui Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Geologic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC841860 (>99% sequence identity) for Sinomonas susongensis from Microbeatlas

Aquatic Samples	12
Soil Samples	255
Animal Samples	15
Plant Samples	9
Total Samples	291

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22069]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22069]	Sinomonas susongensis strain A31 16S ribosomal RNA gene, partial sequence	KC841860	1447	GenBank ENA	1324851 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Sinomonas susongensis A31	GCA_005877005	scaffold	GenBank ENA	1324851 tax ID	*
[Ref.: #66792]	Sinomonas susongensis A31	2890423931	draft	JGI IMG/M	1324851 tax ID	*

[Ref.: #22069]

GC-content

70.8 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Sinomonas susongensis A31 NCBI: GCA_005877005.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	98	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Sinomonas susongensis A31 NCBI: GCA_005877005.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.494	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.912	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	86.468	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	74.272	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	73.5	no

Availability in culture collections External links

[Ref.: #22069]

Culture collection no.

DSM 28245, CCTCC AB 2014068, JCM 31752

[Ref.: #88968]

SI-ID 404603

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sinomonas susongensis sp. nov., isolated from the surface of weathered biotite.	Bao YY, Huang Z, Mao DM, Sheng XF, He LY	Int J Syst Evol Microbiol	10.1099/ijs.0.000064	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22069

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28245

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#88968

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404603.1 )

* These data were automatically processed and therefore are not curated

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