Name: Curtobacterium flaccumfaciens UCD-AKU
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130404

Type strain:

Species: Curtobacterium flaccumfaciens

Strain Designation: UCD-AKU

Culture col. no.: DSM 29247

Strain history: <- D. A. Coil, Univ. of California, USA; UCD-AKU <- H. Holland-Moritz

NCBI tax ID(s): 2035 (species)

SI-ID 404453

DSM 29247

Special Collections

DSMZ

Other strains from Curtobacterium flaccumfaciens

Section

Curtobacterium flaccumfaciens UCD-AKU is a Gram-positive plant pathogen that was isolated from residential carpet.

Gram-positive
plant pathogen
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Curtobacterium*
	Species	**Curtobacterium flaccumfaciens**
	Full Scientific Name (LPSN)	Curtobacterium flaccumfaciens (Hedges 1922) Collins and Jones 1984

	Synonym	Corynebacterium flaccumfaciens
	Synonym	"Bacterium* flaccumfaciens"*
	Synonym	"Phytomonas* poinsettiae"*
	Synonym	Corynebacterium betae
	Synonym	Corynebacterium poinsettiae
	Synonym	Corynebacterium flaccumfaciens subsp. poinsettiae
	Synonym	Corynebacterium oortii
	Synonym	Corynebacterium flaccumfaciens subsp. oortii
	Synonym	Corynebacterium flaccumfaciens subsp. betae

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21556]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #21556]

Culture medium growth

[Ref.: #21556]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21556]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21556]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21556]	Sample type/isolated from	residential carpet
[Ref.: #21556]	Geographic location (country and/or sea, region)	Davis
[Ref.: #21556]	Country	USA
[Ref.: #21556]	Country ISO 3 Code	USA
[Ref.: #21556]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered

#Industrial

#Engineered product

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21556]	Pathogenicity (plant)	yes
[Ref.: #21556]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Curtobacterium flaccumfaciens UCD-AKU	GCA_000349565	scaffold	GenBank ENA	1292022 tax ID	*
[Ref.: #66792]	Curtobacterium flaccumfaciens UCD-AKU	1292022.3	wgs	PATRIC	1292022 tax ID	*
[Ref.: #66792]	Curtobacterium flaccumfaciens UCD-AKU	2547132189	draft	JGI IMG/M	1292022 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Curtobacterium flaccumfaciens UCD-AKU UCD-AKU NCBI: GCA_000349565.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	86.686	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.907	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	80.898	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	73.11	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.433	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	78	no

Availability in culture collections External links

[Ref.: #21556]

Culture collection no.

DSM 29247

[Ref.: #88936]

SI-ID 404453

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequence of Curtobacterium flaccumfaciens Strain UCD-AKU (Phylum Actinobacteria).	Flanagan JC, Lang JM, Darling AE, Eisen JA, Coil DA	Genome Announc	10.1128/genomeA.00244-13	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21556

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29247

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#88936

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404453.1 )

* These data were automatically processed and therefore are not curated

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Curtobacterium flaccumfaciens UCD-AKU UCD-AKU

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