Name: Curtobacterium flaccumfaciens DSM 20129
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7309

Type strain:

Species: Curtobacterium flaccumfaciens

Culture col. no.: DSM 20129, ATCC 6887, NCTC 4758

Strain history: <- ATCC <- NCTC <- W.J. Dowson

NCBI tax ID(s): 2035 (species)

SI-ID 265237

LMG 7242, ATCC 6887, DSM 20129, ICMP 2337, NCTC 4758, PDDCC 2337, JCM 1347, IFO 12156, NBRC 12156, NRRL B-729, CFBP 3405

Other strains from Curtobacterium flaccumfaciens

Section

Curtobacterium flaccumfaciens DSM 20129 is a mesophilic, Gram-positive plant pathogen that was isolated from bean blight.

Gram-positive
mesophilic
plant pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Curtobacterium*
	Species	**Curtobacterium flaccumfaciens**
	Full Scientific Name (LPSN)	Curtobacterium flaccumfaciens (Hedges 1922) Collins and Jones 1984

	Synonym	Corynebacterium flaccumfaciens
	Synonym	"Bacterium* flaccumfaciens"*
	Synonym	"Phytomonas* poinsettiae"*
	Synonym	Corynebacterium betae
	Synonym	Corynebacterium poinsettiae
	Synonym	Corynebacterium flaccumfaciens subsp. poinsettiae
	Synonym	Corynebacterium oortii
	Synonym	Corynebacterium flaccumfaciens subsp. oortii
	Synonym	Corynebacterium flaccumfaciens subsp. betae

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8554]

Culture medium

CORYNEBACTERIUM AGAR (DSMZ Medium 53)

[Ref.: #8554]

Culture medium growth

[Ref.: #8554]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8554]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8554]			growth	30 °C

[Ref.: #8554]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.999

[Ref.: #8554]	Murein short key	B05
[Ref.: #8554]	Murein types	B2ß {Gly} [L-Hsr] D-Glu-D-Orn

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8554]	Sample type/isolated from	bean blight
* marker position based on {}

Isolation sources categories

#Host	#Microbial	#Bacteria
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM410688 (>99% sequence identity) for Curtobacterium from Microbeatlas

Aquatic Samples	6793
Soil Samples	11124
Animal Samples	21247
Plant Samples	9659
Total Samples	48823

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8554]	Pathogenicity (plant)	yes
[Ref.: #8554]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Curtobacterium flaccumfaciens pv. flaccumfaciens partial 16S rRNA gene, type strain DSM 20129	AM410688	1514	ENA	138532 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Curtobacterium flaccumfaciens pv. flaccumfaciens DSM 20129	GCA_019448195	complete	GenBank	138532 tax ID	*
[Ref.: #66792]	Curtobacterium flaccumfaciens pv. flaccumfaciens strain DSM 20129	138532.41	complete	PATRIC	138532 tax ID	*

[Ref.: #8554]

GC-content

68.3 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Curtobacterium flaccumfaciens pv. flaccumfaciens strain DSM 20129 PATRIC: 138532.41
[Ref.: #69481]	spore-forming	no	65	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Curtobacterium flaccumfaciens pv. flaccumfaciens DSM 20129 NCBI: GCA_019448195.1
[Ref.: #69480]	flagellated	no	93.417	no
[Ref.: #69480]	gram-positive	yes	91.783	no
[Ref.: #69480]	anaerobic	no	99.49	no
[Ref.: #69480]	aerobic	yes	90.652	no
[Ref.: #69480]	halophile	no	86.619	no
[Ref.: #69480]	spore-forming	no	91.32	no
[Ref.: #69480]	motile	no	50	no
[Ref.: #69480]	thermophile	no	99.496	yes
[Ref.: #69480]	glucose-util	yes	86.198	no
[Ref.: #69480]	glucose-ferment	no	85.354	no

Availability in culture collections External links

[Ref.: #8554]

Culture collection no.

DSM 20129, ATCC 6887, NCTC 4758

[Ref.: #76759]

SI-ID 265237

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Development of an improved assay for purine nucleoside kinase activity in cell extracts and detection of inosine kinase activity in Brevibacterium acetylicum ATCC 953, related species, and Corynebacterium flaccumfaciens ATCC 6887.	Kawasaki H, Usuda Y, Shimaoka M, Utagawa T	Biosci Biotechnol Biochem	10.1271/bbb.64.761	2000	*
Phylogeny	Nucleic acid hybridization studies on Microbacterium, Curtobacterium, Agromyces and related taxa.	Dopfer H, Stackebrandt E, Fiedler F	J Gen Microbiol	10.1099/00221287-128-8-1697	1982	*
	First report of Curtobacterium flaccumfaciens pv. flaccumfaciens causing bacterial tan spot of soybean in Russia.	Tarakanov RI, Lukianova AA, Pilik RI, Evseev PV, Miroshnikov KA, Dzhalilov FS, Tesic S, Ignatov AN	Plant Dis	10.1094/PDIS-08-22-1778-PDN	2022	*
	First Report of Curtobacterium flaccumfaciens pv. flaccumfaciens Causing Bacterial Wilt and Blight on Sunflower in Russia.	Pilik RI, Tesic S, Ignatov AN, Tarakanov RI, Dorofeeva LV, Lukianova AA, Evseev PV, Dzhalilov FS, Miroshnikov KA	Plant Dis	10.1094/PDIS-05-22-1203-PDN	2022	*

References

#8554

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20129

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#76759

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265237.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Curtobacterium flaccumfaciens in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Curtobacterium flaccumfaciens pv. flaccumfaciens strain DSM 20129

Curtobacterium flaccumfaciens pv. flaccumfaciens DSM 20129

Change proposal

Change proposal