Name: Desulfuromonas carbonis ICBM
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130287

Type strain:

Species: Desulfuromonas carbonis

Strain Designation: ICBM

Culture col. no.: DSM 29759, JCM 30471

Strain history: T. T. An and F. W. Picardal; Indiana Univ., USA; ICBM.

NCBI tax ID(s): 1523623 (species)

SI-ID 399672

DSM 29759

Special Collections

DSMZ
JCM

Section

Desulfuromonas carbonis ICBM is an anaerobe bacterium that was isolated from water extracted from an active coalbed methane gas well.

anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfuromonadales*
	Family	*Desulfuromonadaceae*
	Genus	*Desulfuromonas*
	Species	**Desulfuromonas carbonis**
	Full Scientific Name (LPSN)	Desulfuromonas carbonis An and Picardal 2015

Information on morphological and physiological properties Morphology

[Ref.: #21890]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21890]

Culture medium

DESULFUROMONAS CARBONIS MEDIUM (DSMZ Medium 1584)

[Ref.: #21890]

Culture medium growth

[Ref.: #21890]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21890]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21890]			growth	30 °C
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #21890]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21890]	Sample type/isolated from	water extracted from an active coalbed methane gas well
[Ref.: #21890]	Geographic location (country and/or sea, region)	Indiana, Sullivan County, New Lebanon
[Ref.: #21890]	Country	USA
[Ref.: #21890]	Country ISO 3 Code	USA
[Ref.: #21890]	Continent	North America
[Ref.: #21890]	Geographic location	39.0240°/-87.4470°

[Ref.: #67770]	Sample type/isolated from	Active coalbed methane gas well
[Ref.: #67770]	Geographic location (country and/or sea, region)	IN
[Ref.: #67770]	Country	USA
[Ref.: #67770]	Country ISO 3 Code	USA
[Ref.: #67770]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KJ776405 (>99% sequence identity) for Desulfuromonas carbonis subclade from Microbeatlas

Aquatic Samples	367
Soil Samples	104
Animal Samples	13
Plant Samples	12
Total Samples	496

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21890]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21890]	Desulfuromonas carbonis strain ICBM 16S ribosomal RNA gene, partial sequence	KJ776405	1547	GenBank ENA	1523623 tax ID

[Ref.: #21890]

GC-content

61.2 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #21890]

Culture collection no.

DSM 29759, JCM 30471

[Ref.: #88822]

SI-ID 399672

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Desulfuromonas carbonis sp. nov., an Fe(III)-, S0- and Mn(IV)-reducing bacterium isolated from an active coalbed methane gas well.	An TT, Picardal FW	Int J Syst Evol Microbiol	10.1099/ijs.0.000159	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21890

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29759

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88822

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399672.1 )

* These data were automatically processed and therefore are not curated

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