Name: Azorhizophilus paspali Ax-8
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 12707

Type strain:

Species: Azorhizophilus paspali

Strain Designation: Ax-8, WR-129

Culture col. no.: DSM 2283, ATCC 23833, CCUG 53674, CECT 4095, LMG 3864, IAM 12667, ICMP 7469, JCM 20726, NBRC 102228, NCIMB 12095

Strain history: IAM 12667 <-- ATCC 23833 <-- D. B. Johnstone <-- J. Döbereiner Ax-8.

NCBI tax ID(s): 69963 (species)

SI-ID 1025

LMG 3864, ATCC 23833, NCIB 12095, DSM 2283, NCIMB 12095, IAM12667, CECT 4095, ICMP 7469, NCAIM B.01794, NRRL B-14628, CCUG 53674, NBRC 102228, JCM 20726

Special Collections

Other strains from Azorhizophilus paspali

Section

Azorhizophilus paspali Ax-8 is a bacterium that was isolated from rhizosphere soil of Paspalum notatum.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Azorhizophilus*
	Species	**Azorhizophilus paspali**
	Full Scientific Name (LPSN)	Azorhizophilus paspali (Döbereiner 1966) Thompson and Skerman 1981

Synonym

Azotobacter paspali

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1017]

Culture medium

DIAZOTROPHIC MEDIUM (RBA) (DSMZ Medium 441)

[Ref.: #1017]

Culture medium growth

[Ref.: #1017]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1017]

Culture medium composition

expand / minimize

[Ref.: #1017]

Culture medium

AZOTOBACTER MEDIUM (DSMZ Medium 3)

[Ref.: #1017]

Culture medium growth

[Ref.: #1017]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1017]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1017]			growth	30 °C
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1017]	Sample type/isolated from	rhizosphere soil of Paspalum notatum
[Ref.: #1017]	Host species	Paspalum notatum
[Ref.: #1017]	Country	Brazil
[Ref.: #1017]	Country ISO 3 Code	BRA
[Ref.: #1017]	Continent	Middle and South America

[Ref.: #59973]	Sample type/isolated from	Soil,rhizosphere

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB681742 (>99% sequence identity) for Azotobacter from Microbeatlas

Aquatic Samples	10
Soil Samples	9
Animal Samples	15
Plant Samples	3
Total Samples	37

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1017]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Azorhizophilus paspali partial 16S rRNA gene, isolate ICMP 7469; ATCC 23833	AJ308318	1384	GenBank ENA	69963 tax ID	*
[Ref.: #20218]	Azorhizophilus paspali strain ICMP 7469 16S ribosomal RNA gene, partial sequence	EF100147	1371	GenBank ENA	69963 tax ID	*
[Ref.: #20218]	Azorhizophilus paspali gene for 16S rRNA, partial sequence, strain: NBRC 102228	AB681742	1461	GenBank ENA	69963 tax ID	*

Availability in culture collections External links

[Ref.: #1017]

Culture collection no.

DSM 2283, ATCC 23833, CCUG 53674, CECT 4095, LMG 3864, IAM 12667, ICMP 7469, JCM 20726, NBRC 102228, NCIMB 12095

[Ref.: #81917]

SI-ID 1025

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Detection of alternative nitrogenases in aerobic gram-negative nitrogen-fixing bacteria.	Fallik E, Chan YK, Robson RL	J Bacteriol	10.1128/jb.173.1.365-371.1991	1991	*

References

#1017

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2283

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#59973 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 53674
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#81917

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID1025.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Azorhizophilus paspali in external resources:
SILVA
BRENDA
PANGAEA
GBIF