Pseudoalteromonas lipolytica (DSM 22356, CGMCC 1.8499, JCM 15903)

Name: Pseudoalteromonas lipolytica (DSM 22356, CGMCC 1.8499, JCM 15903)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12702

Type strain

Culture col. no. DSM 22356 CGMCC 1.8499 JCM 15903 LMEB 39

NCBI tax ID(s) 1315275 570156

Special Collections DSMZ JCM Literature strains

History <- Y.-H. Wu, Zhejiang Univ., Zijingang Campus, P.R. China; LMEB39 X.-W. Xu LMEB 39.

Links

Pseudoalteromonas lipolytica DSM 22356 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from sea water.

Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 401772

JCM 15903,DSM 22356

@ref 20215

Last LPSN update 2026-02-09 11:20:55

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Pseudoalteromonadaceae

Genus Pseudoalteromonas

Species Pseudoalteromonas lipolytica

Full scientific name Pseudoalteromonas lipolytica Xu et al. 2010

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
29639	negative	01-02 µm	0.5-0.8 µm	rod-shaped
125438					91.4
125438	negative				100
125439	negative				99.2

Pigmentation

29639

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16180	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
16180	positive	growth	28	mesophilic
29639	positive	growth	15-37
29639	positive	optimum	25	mesophilic
67770	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
29639	positive	optimum	07-08
29639	positive	growth	5.5-9.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
29639	aerobe
125439	obligate aerobe	98.6

Spore formation

@ref	Spore formation	Confidence
125439		99.2

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29639	NaCl	positive	growth	0.5-15 %
29639	NaCl	positive	optimum	3 %

Observation

@ref	Observation
29639	aggregates in chains
67770	quinones: Q-8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29639	17128 ChEBI	adipate	+	carbon source
29639	22599 ChEBI	arabinose	+	carbon source
29639	27689 ChEBI	decanoate	+	carbon source
29639	4853 ChEBI	esculin	+	hydrolysis
29639	25115 ChEBI	malate	+	carbon source
29639	17306 ChEBI	maltose	+	carbon source
29639	17632 ChEBI	nitrate	+	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
29639	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
29639	catalase	+	1.11.1.6
29639	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
16180	sea water	Yangtze River estuary near East China Sea, (31° 00' 04'' N 122° 37' 26'' E)	China	CHN	Asia	31.0011	122.624 31.0011/122.624
67770	Seawater sample collected from the Yangtze River estuary near the East China Sea

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16180	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1492528v1 assembly for Pseudoalteromonas lipolytica LMEB 39	chromosome	GCA_014925285	1315275.3	8117223981	1315275	82.32
66792	IMG-taxon 2617270886 annotated assembly for Pseudoalteromonas lipolytica CGMCC 1.8499	scaffold	GCA_900116435	570156.7	2617270886	570156	67.17

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16180	Pseudoalteromonas lipolytica strain LMEB 39 16S ribosomal RNA gene, partial sequence	FJ404721	1503		1315275
124043	Pseudoalteromonas lipolytica LMEB 39 16S ribosomal RNA gene, partial sequence.	MG722649	400		1315275

GC content

@ref	GC-content (mol%)	Method
16180	42.3	thermal denaturation, midpoint method (Tm)
29639	42.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Pseudoalteromonas lipolytica CGMCC 1.8499
NCBI: GCA_900116435

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.20	no
125439	motility	BacteriaNetⓘ	yes	75.80	no
125439	gram_stain	BacteriaNetⓘ	negative	99.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudoalteromonas lipolytica LMEB 39
PATRIC: 1315275.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	95.44	no
125438	spore-forming	spore-formingⓘ	no	88.23	no
125438	aerobic	aerobicⓘ	yes	70.16	no
125438	thermophilic	thermophileⓘ	no	99.94	yes
125438	flagellated	motile2+ⓘ	yes	91.40	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Increased secretion of bacterial pyomelanin caused by light accelerates corrosion of low alloy steel.	Guo Z, Feng Q, Mao X, Guo N, Yin Y, Liu T.	Chemosphere	10.1016/j.chemosphere.2024.142353	2024
	Biodegradation of polystyrene (PS) and polypropylene (PP) by deep-sea psychrophilic bacteria of Pseudoalteromonas in accompany with simultaneous release of microplastics and nanoplastics.	Lv S, Wang Q, Li Y, Gu L, Hu R, Chen Z, Shao Z.	Sci Total Environ	10.1016/j.scitotenv.2024.174857	2024
	A point mutation in a wspF-like gene in Pseudoalteromonas lipolytica enhances the anticorrosion activity.	Zeng Z, He D, Zhao Z, He T, Li Q, Wang Y.	Appl Environ Microbiol	10.1128/aem.02154-24	2025
	Impact of phosphate concentration on the metabolome of biofilms of the marine bacterium Pseudoalteromonas lipolytica.	Carriot N, Barry-Martinet R, Briand JF, Ortalo-Magne A, Culioli G.	Metabolomics	10.1007/s11306-022-01875-x	2022
	Diversity and Potential Metabolic Characteristics of Culturable Copiotrophic Bacteria That Can Grow on Low-Nutrient Medium in Zhenbei Seamount in the South China Sea.	Zhao Z, Liu S, Jiang S, Zhang D, Sha Z.	Microb Ecol	10.1007/s00248-024-02475-z	2024
Genetics	Molecular basis of the phenotypic variants arising from a Pseudoalteromonas lipolytica mutator.	Zeng Z, Gu J, Lin S, Li Q, Wang W, Guo Y.	Microb Genom	10.1099/mgen.0.001118	2023
	Positive effects of molybdenum on the biomineralization process on the surface of low-alloy steel catalyzed by Bacillus subtilis.	Guo Z, Feng Q, Guo N, Yin Y, Liu T.	Front Microbiol	10.3389/fmicb.2024.1428286	2024
	Metabolomic and proteomic changes induced by growth inhibitory concentrations of copper in the biofilm-forming marine bacterium Pseudoalteromonas lipolytica.	Favre L, Ortalo-Magne A, Kerloch L, Pichereaux C, Misson B, Briand JF, Garnier C, Culioli G.	Metallomics	10.1039/c9mt00184k	2019
Metabolism	Biofilm formation in Pseudoalteromonas lipolytica is related to IS5-like insertions in the capsular polysaccharide operon.	Zeng Z, Zhan W, Wang W, Wang P, Tang K, Wang X.	FEMS Microbiol Ecol	10.1093/femsec/fiz065	2019
	Marine Bacteria Provide Lasting Anticorrosion Activity for Steel via Biofilm-Induced Mineralization.	Liu T, Guo Z, Zeng Z, Guo N, Lei Y, Liu T, Sun S, Chang X, Yin Y, Wang X.	ACS Appl Mater Interfaces	10.1021/acsami.8b14991	2018
	Comparative Genomic Insights into Bacterial Induction of Larval Settlement and Metamorphosis in the Upside-Down Jellyfish Cassiopea.	Ohdera A, Attarwala K, Wu V, Henry R, Laird H, Hofmann DK, Fitt WK, Medina M.	mSphere	10.1128/msphere.00315-22	2023
	Molecular Basis of Wrinkled Variants Isolated From Pseudoalteromonas lipolytica Biofilms.	Zeng Z, Lin S, Li Q, Wang W, Wang Y, Xiao T, Guo Y.	Front Microbiol	10.3389/fmicb.2022.797197	2022
	Adhesion of Bacillus subtilis and Pseudoalteromonas lipolytica to steel in a seawater environment and their effects on corrosion.	Guo Z, Liu T, Cheng YF, Guo N, Yin Y.	Colloids Surf B Biointerfaces	10.1016/j.colsurfb.2017.05.045	2017
	Biofilm formation in marine bacteria and biocidal sensitivity: interplay between a potent antibiofilm compound (AS162) and quorum-sensing autoinducers.	Gozoua E, Koffi-Nevry R, Blache Y.	3 Biotech	10.1007/s13205-019-1866-6	2019
	Influence of calcium sources on the bio-mineralization behavior of Shewanella putrefaciens and induced microbiologically influenced corrosion inhibition.	Lou Y, Zhang H, Chang W, Yang J, Chen X, Hao X, Qian H, Zhang D.	Front Microbiol	10.3389/fmicb.2025.1532151	2025
	Draft Genome Sequences of Pseudoalteromonas tetraodonis CSB01KR and Pseudoalteromonas lipolytica CSB02KR, Isolated from the Gut of the Sea Cucumber Apostichopus japonicus.	Jo J, Choi H, Lee SG, Oh J, Lee HG, Park C.	Genome Announc	10.1128/genomea.00627-17	2017
	Sustainable and Reusable Modified Membrane Based on Green Gold Nanoparticles for Efficient Methylene Blue Water Decontamination by a Photocatalytic Process.	Mergola L, Carbone L, Bloise E, Lazzoi MR, Del Sole R.	Nanomaterials (Basel)	10.3390/nano14191611	2024
	Probiotics prevent mortality of thermal-sensitive corals exposed to short-term heat stress.	de Breuyn M, Ostendarp M, El-Khaled YC, Garcias-Bonet N, Carvalho S, Wild C, Peixoto RS.	ISME Commun	10.1093/ismeco/ycaf039	2025
Pathogenicity	Screening of bromotyramine analogues as antifouling compounds against marine bacteria.	Andjouh S, Blache Y.	Biofouling	10.1080/08927014.2016.1200562	2016
Enzymology	Isolation and Complete Genome Sequence of a Novel Pseudoalteromonas Phage PH357 from the Yangtze River Estuary.	Gong Z, Wang M, Yang Q, Li Z, Xia J, Gao Y, Jiang Y, Jiang Y, Meng X, Liu Z, Yang D, Zhang F, Shao H, Wang D.	Curr Microbiol	10.1007/s00284-017-1244-8	2017
	Genome sequences of two pseudoalteromonas strains isolated from the South china sea.	Zeng Z, Dai S, Xie Y, Tian X, Li J, Wang X.	Genome Announc	10.1128/genomea.00305-14	2014
	Draft Genome Sequences of Two Pseudoalteromonas Strains Isolated from Roots and Leaf Blades of the Seagrass Zostera marina.	Alexiev A, Krusor ML, Jospin G, Lang JM, Eisen JA, Coil DA.	Genome Announc	10.1128/genomea.00010-16	2016
	Design of Multi-Functional Superhydrophobic Coating via Bacterium-Induced Hierarchically Structured Minerals on Steel Surface.	Zhang Y, Liu T, Kang J, Guo N, Guo Z, Chen J, Yin Y.	Front Microbiol	10.3389/fmicb.2022.934966	2022
Metabolism	Pyomelanin from Pseudoalteromonas lipolytica reduces biofouling.	Zeng Z, Guo XP, Cai X, Wang P, Li B, Yang JL, Wang X.	Microb Biotechnol	10.1111/1751-7915.12773	2017
Metabolism	Pyomelanin produced by Streptomyces sp. ZL-24 and its protective effects against SH-SY5Y cells injury induced by hydrogen peroxide.	Li Y, Ye Z, Lu P, Lu L.	Sci Rep	10.1038/s41598-021-94598-3	2021
Phylogeny	Characterization of self-generated variants in Pseudoalteromonas lipolytica biofilm with increased antifouling activities.	Zeng Z, Guo XP, Li B, Wang P, Cai X, Tian X, Zhang S, Yang JL, Wang X.	Appl Microbiol Biotechnol	10.1007/s00253-015-6865-x	2015
	Copepod-Associated Gammaproteobacteria Respire Nitrate in the Open Ocean Surface Layers.	Moisander PH, Shoemaker KM, Daley MC, McCliment E, Larkum J, Altabet MA.	Front Microbiol	10.3389/fmicb.2018.02390	2018
	A redox switch regulates the assembly and anti-CRISPR activity of AcrIIC1.	Zhao Y, Hu J, Yang SS, Zhong J, Liu J, Wang S, Jiao Y, Jiang F, Zhai R, Ren B, Cong H, Zhu Y, Han F, Zhang J, Xu Y, Huang Z, Zhang S, Yang F.	Nat Commun	10.1038/s41467-022-34551-8	2022
	New Biocalcifying Marine Bacterial Strains Isolated from Calcareous Deposits and Immediate Surroundings.	Vincent J, Colin B, Lanneluc I, Sabot R, Sopena V, Turcry P, Mahieux PY, Refait P, Jeannin M, Sable S.	Microorganisms	10.3390/microorganisms10010076	2021
	Electrochemical enrichment of haloalkaliphilic nitrate-reducing microbial biofilm at the cathode of bioelectrochemical systems.	Chaudhary S, Singh R, Yadav S, Patil SA.	iScience	10.1016/j.isci.2021.102682	2021
	Temporary Inhibition of the Corrosion of AZ31B Magnesium Alloy by Formation of Bacillus subtilis Biofilm in Artificial Seawater.	Kang Y, Li L, Li S, Zhou X, Xia K, Liu C, Qu Q.	Materials (Basel)	10.3390/ma12030523	2019
	Growth Substrate and Prophage Induction Collectively Influence Metabolite and Lipid Profiles in a Marine Bacterium.	Basso JTR, Jones KA, Jacobs KR, Christopher CJ, Fielland HB, Campagna SR, Buchan A.	mSystems	10.1128/msystems.00585-22	2022
	Production and properties of non-cytotoxic pyomelanin by laccase and comparison to bacterial and synthetic pigments.	Lorquin F, Ziarelli F, Amouric A, Di Giorgio C, Robin M, Piccerelle P, Lorquin J.	Sci Rep	10.1038/s41598-021-87328-2	2021
Metabolism	Molecular Characterization of the Bacterial Community in Biofilms for Degradation of Poly(3-Hydroxybutyrate-co-3-Hydroxyhexanoate) Films in Seawater.	Morohoshi T, Ogata K, Okura T, Sato S.	Microbes Environ	10.1264/jsme2.me17052	2018
	Biofilm Formation and Heat Stress Induce Pyomelanin Production in Deep-Sea Pseudoalteromonas sp. SM9913.	Zeng Z, Cai X, Wang P, Guo Y, Liu X, Li B, Wang X.	Front Microbiol	10.3389/fmicb.2017.01822	2017
Metabolism	Bioactive Compounds of Pseudoalteromonas sp. IBRL PD4.8 Inhibit Growth of Fouling Bacteria and Attenuate Biofilms of Vibrio alginolyticus FB3.	Supardy NA, Ibrahim D, Mat Nor SR, Noordin WNM.	Pol J Microbiol	10.21307/pjm-2019-003	2019
Phylogeny	High resolution profiling of coral-associated bacterial communities using full-length 16S rRNA sequence data from PacBio SMRT sequencing system.	Pootakham W, Mhuantong W, Yoocha T, Putchim L, Sonthirod C, Naktang C, Thongtham N, Tangphatsornruang S.	Sci Rep	10.1038/s41598-017-03139-4	2017
Phylogeny	Pseudoalteromonas profundi sp. nov., isolated from a deep-sea seamount.	Zhang DC, Liu YX, Huang HJ, Wu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001366	2016
Phylogeny	Pseudoalteromonas shioyasakiensis sp. nov., a marine polysaccharide-producing bacterium.	Matsuyama H, Sawazaki K, Minami H, Kasahara H, Horikawa K, Yumoto I	Int J Syst Evol Microbiol	10.1099/ijs.0.055558-0	2013
Phylogeny	Pseudoalteromonas arabiensis sp. nov., a marine polysaccharide-producing bacterium.	Matsuyama H, Minami H, Kasahara H, Kato Y, Murayama M, Yumoto I	Int J Syst Evol Microbiol	10.1099/ijs.0.043604-0	2012
Phylogeny	Pseudoalteromonas lipolytica sp. nov., isolated from the Yangtze River estuary.	Xu XW, Wu YH, Wang CS, Gao XH, Wang XG, Wu M	Int J Syst Evol Microbiol	10.1099/ijs.0.017673-0	2009

References

#16180	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22356
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26028	IJSEM 2176 2010 ( DOI 10.1099/ijs.0.017673-0 , PubMed 19897616 )
#29639	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26028
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudoalteromonas lipolytica (DSM 22356, CGMCC 1.8499, JCM 15903)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014925285

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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