Sporosarcina koreensis (DSM 16921, CIP 109817, KACC 11299)

Name: Sporosarcina koreensis (DSM 16921, CIP 109817, KACC 11299)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11996

Type strain

Strain Designation F73

Culture col. no. DSM 16921 CIP 109817 KACC 11299 F73 NBRC 106531 1 more

NCBI tax ID(s) 334735

Special Collections DSMZ JCM CIP Literature strains

Links

Sporosarcina koreensis F73 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from soil.

spore-forming Gram-positive motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 309504

DSM 16921,KACC 11299,CIP 109817,JCM 16400

@ref 20215

Last LPSN update 2025-12-16 09:49:44

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Caryophanaceae

Genus Sporosarcina

Species Sporosarcina koreensis

Full scientific name Sporosarcina koreensis Kwon et al. 2007

BacDive ID	Other strains from **Sporosarcina koreensis** (1)	Type strain
154983	S. koreensis CCUG 55952

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
31812	positive	2.8 µm	0.6 µm	rod-shaped
120488	positive			rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6643	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
37854	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
120488	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6643	positive	growth	30	mesophilic
31812	positive	growth	15-40
31812	positive	optimum	30	mesophilic
37854	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH
31812	positive	optimum	7
31812	positive	growth	6.0-9.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
31812	aerobe
120488	obligate aerobe

Spore formation

31812

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31812	NaCl	positive	growth	0.0-7.0 %
31812	NaCl	positive	optimum	3.5 %

Murein

@ref	Murein short key	Type
6643	A11.33	A4alpha L-Lys-D-Glu

Observation

67770

Observationquinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31812	16947 ChEBI	citrate	-	carbon source
120488	17632 ChEBI	nitrate	-	reduction
120488	16301 ChEBI	nitrite	-	reduction
31812	17272 ChEBI	propionate	-	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120488	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
31812	catalase	+	1.11.1.6
120488	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
31812	cytochrome oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
31812	gelatinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
120488	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
31812	urease	+	3.5.1.5
120488	urease	+	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120488	-	+	+	-	-	+	+	-	+	+	+	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6643	soil	Suwon	Republic of Korea	KOR	Asia
67770	Upland soil in Suwon		Republic of Korea	KOR	Asia
120488	Environment, Soil	Suwon	Republic of Korea	KOR	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6643	1	Risk group (German classification) According to TRBA 466
120488	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265582v1 assembly for Sporosarcina koreensis KACC 11299	contig	GCA_042655825	334735	62.09

Genome browser: GCA_042655825

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6643	Sporosarcina koreensis strain F73 16S ribosomal RNA gene, partial sequence	DQ073393	1498		334735
124043	Sporosarcina koreensis gene for 16S rRNA, partial sequence, strain: NBRC 106531.	AB682452	1477		334735

GC content

@ref	GC-content (mol%)
6643	46.5
67770	44.5

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sporosarcina koreensis sp. nov. and Sporosarcina soli sp. nov., isolated from soil in Korea.	Kwon SW, Kim BY, Song J, Weon HY, Schumann P, Tindall BJ, Stackebrandt E, Fritze D	Int J Syst Evol Microbiol	10.1099/ijs.0.64352-0	2007

References

#6643	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16921
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#31812	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28080 (see below)
#37854	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#120488	Collection of Institut Pasteur ; Curators of the CIP; CIP 109817
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sporosarcina koreensis (DSM 16921, CIP 109817, KACC 11299)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Murein

Observation

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042655825

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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