Planococcus psychrophilus (DSM 14507, MTCC 3812, CMS 53or)

Name: Planococcus psychrophilus (DSM 14507, MTCC 3812, CMS 53or)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11969

Type strain

Culture col. no. DSM 14507 MTCC 3812 CMS 53or CIP 107727

NCBI tax ID(s) 161361

Special Collections DSMZ CIP

History DSMZ <- S. Shivaji; CMS 53or CIP <- 2002, S. Shivaji, Hyderabad, India: strain CMS 53or CIP <- 2002, S. Shivaji, CCMB, Hyderabad, India: strain CMS 53or

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Planococcus psychrophilus DSM 14507 is an obligate aerobe, Gram-positive, coccus-shaped bacterium that was isolated from cyanobacterial mat sample.

Gram-positive coccus-shaped obligate aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 93336

MTCC 3812,DSM 14507,CIP 107727

@ref 20215

Last LPSN update 2026-05-29 08:27:41

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Caryophanaceae

Genus Planococcus

Species Planococcus psychrophilus

Full scientific name Planococcus psychrophilus Reddy et al. 2002

Synonyms (1)

Planomicrobium psychrophilum

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
122027	positive	coccus-shaped

Colony morphology

122027

Hemolysis ability0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5273	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
40571	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
122027	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
5273	positive	growth	25
40571	positive	growth	22
122027	positive	growth	22-30
122027	negative	growth	10
122027	negative	growth	37
122027	negative	growth	41
122027	negative	growth	45

Physiology and metabolism

Oxygen tolerance

122027

Oxygen toleranceobligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
122027	NaCl	positive	growth	0-10 %

Murein

@ref	Murein short key	Type
5273	A11.33	A4alpha L-Lys-D-Glu

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
122027	606565 ChEBI	hippurate	-	hydrolysis
122027	17632 ChEBI	nitrate	+	reduction
122027	16301 ChEBI	nitrite	-	reduction
122027	35020 ChEBI	tributyrin	-	hydrolysis

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
122027	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122027	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
122027	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
122027	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122027	amylase	-
68382	beta-galactosidase	+	3.2.1.23	from API zym
122027	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
122027	caseinase	+	3.4.21.50
122027	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
122027	DNase	+/-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
122027	gamma-glutamyltransferase	-	2.3.2.2
122027	gelatinase	-
122027	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
122027	lipase	-
68382	lipase (C 14)	-		from API zym
122027	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
122027	ornithine decarboxylase	-	4.1.1.17
122027	oxidase	-
122027	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
122027	tryptophan deaminase	-
122027	tween esterase	-
122027	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
122027	-	-	+	+	-	+	-	-	-	-	-	-	-	+	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Microbial community	#Microbial mat
#Host	#Microbial	#Bacteria

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Geographic location
5273	cyanobacterial mat sample			Australia and Oceania	McMurdo Dry Valleys
122027	Cyanobacterial material	Antarctica	ATA	Antarctica

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5273	1	Risk group (German classification) According to TRBA 466
122027	1	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5273	Planococcus psychrophilus partial 16S rRNA gene, strain CMS 53or	AJ314746	1480		161361

GC content

5273

GC-content (mol%)44.5

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Robust Demarcation of the Family Caryophanaceae (Planococcaceae) and Its Different Genera Including Three Novel Genera Based on Phylogenomics and Highly Specific Molecular Signatures.	Gupta RS, Patel S.	Front Microbiol	10.3389/fmicb.2019.02821	2019
Phylogeny	Planococcus antarcticus and Planococcus psychrophilus spp. nov. isolated from cyanobacterial mat samples collected from ponds in Antarctica.	Reddy GS, Prakash JS, Vairamani M, Prabhakar S, Matsumoto GI, Shivaji S	Extremophiles	10.1007/s00792-001-0250-7	2002
Phylogeny	Planococcus maritimus sp. nov., isolated from sea water of a tidal flat in Korea.	Yoon JH, Weiss N, Kang KH, Oh TK, Park YH.	Int J Syst Evol Microbiol	10.1099/ijs.0.02557-0	2003
Phylogeny	Planomicrobium chinense sp. nov., isolated from coastal sediment, and transfer of Planococcus psychrophilus and Planococcus alkanoclasticus to Planomicrobium as Planomicrobium psychrophilum comb. nov. and Planomicrobium alkanoclasticum comb. nov.	Dai X, Wang YN, Wang BJ, Liu SJ, Zhou YG	Int J Syst Evol Microbiol	10.1099/ijs.0.63340-0	2005
Phylogeny	Planococcus stackebrandtii sp. nov., isolated from a cold desert of the Himalayas, India.	Mayilraj S, Prasad GS, Suresh K, Saini HS, Shivaji S, Chakrabarti T	Int J Syst Evol Microbiol	10.1099/ijs.0.63290-0	2005

References

#5273	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14507
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#40571	; Curators of the CIP;
#68382	Automatically annotated from API zym .
#122027	Collection of Institut Pasteur ; Curators of the CIP; CIP 107727
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Planococcus psychrophilus (DSM 14507, MTCC 3812, CMS 53or)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Murein

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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