Name: Desulfallas thermosapovorans MLF
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11817

Type strain:

Species: Desulfallas thermosapovorans

Strain Designation: MLF

Culture col. no.: DSM 6562, NBRC 112758

Strain history: <- J.-L. Garcia, Université de Provence, Marseille, France; MLF <- M.-L. Fardeau {1991}

NCBI tax ID(s): 1121431 (strain), 58137 (species)

SI-ID 48236

DSM 6562, NCIMB 13375

Special Collections

DSMZ

Section

Desulfallas thermosapovorans MLF is an anaerobe, spore-forming bacterium that was isolated from rice hulls and peanut shells compost.

spore-forming
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptococcaceae*
	Genus	*Desulfallas*
	Species	**Desulfallas thermosapovorans**
	Full Scientific Name (LPSN)	Desulfallas thermosapovorans (Fardeau et al. 1995) Watanabe et al. 2018

Synonym

Desulfotomaculum thermosapovorans

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2730]

Culture medium

DESULFALLAS THERMOSAPOVORANS MEDIUM (DSMZ Medium 667)

[Ref.: #2730]

Culture medium growth

[Ref.: #2730]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2730]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2730]			growth	50 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #2730]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2730]	Sample type/isolated from	rice hulls and peanut shells compost
[Ref.: #2730]	Geographic location (country and/or sea, region)	Africa, country of origin unknown
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Composting
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence Y11575 (>99% sequence identity) for Desulfallas thermosapovorans subclade from Microbeatlas

Aquatic Samples	15
Soil Samples	15
Animal Samples	1
Plant Samples	9
Total Samples	40

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2730]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2730]	Desulfotomaculum thermosapovorans ribosomal RNA	Z26315	1528	GenBank ENA	1121431 tax ID
[Ref.: #20218]	D.thermosapovorans 16S rRNA gene	Y11575	1450	GenBank ENA	58137 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Desulfallas thermosapovorans DSM 6562	GCA_008124625	contig	GenBank ENA	1121431 tax ID	*
[Ref.: #66792]	Desulfallas thermosapovorans DSM 6562	1121431.3	wgs	PATRIC	1121431 tax ID	*
[Ref.: #66792]	Desulfallas thermosapovorans DSM 6562	2599185175	draft	JGI IMG/M	1121431 tax ID	*

[Ref.: #2730]	GC-content	51.2 mol%	Buoyant density centrifugation (BD)
[Ref.: #2730]	GC-content	63.5 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Desulfallas thermosapovorans DSM 6562 PATRIC: 1121431.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	88	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Desulfallas thermosapovorans DSM 6562 PATRIC: 1121431.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	62.572	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	87.001	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	81.913	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	89.401	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	yes	68.922	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	68.335	no

Availability in culture collections External links

[Ref.: #2730]

Culture collection no.

DSM 6562, NBRC 112758

[Ref.: #81035]

SI-ID 48236

References

#2730

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6562

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81035

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48236.1 )

* These data were automatically processed and therefore are not curated

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Desulfallas thermosapovorans DSM 6562

Desulfallas thermosapovorans DSM 6562

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