Haemophilus aegyptius 180-a is a microaerophile bacterium that was isolated from human conjunctiva.
microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pasteurellales |
| Family Pasteurellaceae |
| Genus Haemophilus |
| Species Haemophilus aegyptius |
| Full scientific name Haemophilus aegyptius corrig. (Trevisan 1889) Pittman and Davis 1950 (Approved Lists 1980) |
| Synonyms (2) |
| BacDive ID | Other strains from Haemophilus aegyptius (4) | Type strain |
|---|---|---|
| 136076 | H. aegyptius 128a, CIP 52.130, NCTC 8134, CCUG 26840 | |
| 138626 | H. aegyptius 898.84, CIP 101256 | |
| 138710 | H. aegyptius 181a, CIP 52.128 | |
| 141284 | H. aegyptius CCUG 628 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_21187_1.jpg |
| multimedia.multimedia content: | EM_DSM_21187_1.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_21187_2.jpg |
| multimedia.multimedia content: | EM_DSM_21187_2.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_21187_3.jpg |
| multimedia.multimedia content: | EM_DSM_21187_3.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_21187_4.jpg |
| multimedia.multimedia content: | EM_DSM_21187_4.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_21187_5.jpg |
| multimedia.multimedia content: | EM_DSM_21187_5.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 15433 | HAEMOPHILUS MEDIUM (DSMZ Medium 804) | Medium recipe at MediaDive | Name: HAEMOPHILUS MEDIUM (DSMZ Medium 804) Composition: Mueller-Hinton broth 21.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 37737 | MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml) | |||
| 116054 | CIP Medium 10 | Medium recipe at CIP |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||||||||||||||
| @ref | 48252 | |||||||||||||||||||||||||||||||||||||||||||||
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| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host Body-Site | #Organ | #Eye | |
| #Infection | #Patient | - | |
| #Host | #Human | - | |
| #Infection | #Inflammation | - |
Global distribution of 16S sequence AY362905 (>99% sequence identity) for Haemophilus influenzae from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Haemophilus aegyptius strain FDAARGOS_1478 | complete | 197575 | 99.25 | ||||
| 66792 | Haemophilus aegyptius strain FDAARGOS_1478 | complete | 197575 | 99.25 | ||||
| 66792 | Haemophilus aegyptius strain FDAARGOS_1478 | complete | 197575 | 99.25 | ||||
| 66792 | 49595_C01 assembly for Haemophilus aegyptius NCTC8502 | complete | 197575 | 99.09 | ||||
| 124043 | ASM1993090v1 assembly for Haemophilus aegyptius FDAARGOS_1478 | complete | 197575 | 99.06 | ||||
| 66792 | ASM19500v1 assembly for Haemophilus aegyptius ATCC 11116 | scaffold | 888728 | 41.02 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Haemophilus aegyptius strain NCTC 8502 16S ribosomal RNA gene, partial sequence | M75044 | 1476 | 197575 | ||
| 15433 | Haemophilus aegyptius ATCC 11116 strain CCUG 25716 16S ribosomal RNA gene, partial sequence | AY362905 | 1362 | 888728 | ||
| 124043 | Haemophilus aegyptius CCUG 25716 gene for 16S rRNA, partial sequence. | LC752344 | 586 | 888728 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.30 | no |
| 125439 | motility | BacteriaNetⓘ | no | 68.80 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.90 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 89.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.31 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.54 | yes |
| 125438 | aerobic | aerobicⓘ | no | 92.14 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 91.83 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 96.06 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Glycoengineering with neuraminic acid analogs to label lipooligosaccharides and detect native sialyltransferase activity in gram-negative bacteria. | Alvarado-Melendez EI, de Jong H, Hartman JEM, Ong JY, Wosten MMSM, Wennekes T. | Glycobiology | 10.1093/glycob/cwae071 | 2024 | ||
| Complete Whole-Genome Sequence of Haemophilus haemolyticus NCTC 10839. | Fazal MA, Alexander S, Grayson NE, Deheer-Graham A, Oliver K, Holroyd N, Parkhill J, Russell JE. | Microbiol Resour Announc | 10.1128/mra.00232-19 | 2019 | ||
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| rRNA gene restriction patterns of Haemophilus influenzae biogroup aegyptius strains associated with Brazilian purpuric fever. | Irino K, Grimont F, Casin I, Grimont PA. | J Clin Microbiol | 10.1128/jcm.26.8.1535-1538.1988 | 1988 | ||
| Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors for Fimbrial Adhesins of Enterotoxigenic Escherichia coli. | Lonardi E, Moonens K, Buts L, de Boer AR, Olsson JD, Weiss MS, Fabre E, Guerardel Y, Deelder AM, Oscarson S, Wuhrer M, Bouckaert J. | Biology (Basel) | 10.3390/biology2030894 | 2013 | ||
| Metabolism | Promiscuous methylation of non-canonical DNA sites by HaeIII methyltransferase. | Cohen HM, Tawfik DS, Griffiths AD. | Nucleic Acids Res | 10.1093/nar/gkf507 | 2002 | |
| N4-methylcytosine as a minor base in bacterial DNA. | Ehrlich M, Wilson GG, Kuo KC, Gehrke CW. | J Bacteriol | 10.1128/jb.169.3.939-943.1987 | 1987 | ||
| Enzymology | Analysis of simian virus 40 DNA with the restriction enzyme of Haemophilus aegyptius, endonuclease Z. | Huang ES, Newbold JE, Pagano JS. | J Virol | 10.1128/jvi.11.4.508-514.1973 | 1973 | |
| Enzymology | Specific fragments of phi X174 deoxyribonucleic acid produced by a restriction enzyme from Haemophilus aegyptius, endonuclease Z. | Middleton JH, Edgell MH, Hutchison CA. | J Virol | 10.1128/jvi.10.1.42-50.1972 | 1972 | |
| Nucleotide sequences of genes coding for fimbrial proteins in a cryptic genospecies of Haemophilus spp. isolated from neonatal and genital tract infections. | Gousset N, Rosenau A, Sizaret PY, Quentin R. | Infect Immun | 10.1128/iai.67.1.8-15.1999 | 1999 | ||
| Phylogeny | Serology of oral Actinobacillus actinomycetemcomitans and serotype distribution in human periodontal disease. | Zambon JJ, Slots J, Genco RJ. | Infect Immun | 10.1128/iai.41.1.19-27.1983 | 1983 | |
| Genetics | A severe asthma phenotype of excessive airway Haemophilus influenzae relative abundance associated with sputum neutrophilia. | Versi A, Azim A, Ivan FX, Abdel-Aziz MI, Bates S, Riley J, Uddin M, Zounemat Kermani N, Maitland-Van Der Zee AH, Dahlen SE, Djukanovic R, Chotirmall SH, Howarth P, Adcock IM, Chung KF, U-BIOPRED study group. | Clin Transl Med | 10.1002/ctm2.70007 | 2024 | |
| Comprehensive Profile of Pathogens and Antimicrobial Resistance in Conjunctivitis Cases from Niger. | Amza A, Nassirou B, Kadri B, Ali S, Mariama B, Ibrahim CM, Roufaye LA, Lebas E, Colby E, Zhong L, Chen C, Ruder K, Yu D, Liu Y, Abraham T, Chang A, Mai L, Hinterwirth A, Seitzman GD, Lietman TM, Doan T. | Am J Trop Med Hyg | 10.4269/ajtmh.23-0498 | 2023 | ||
| Tracheal microbiome and metabolome profiling in iatrogenic subglottic tracheal stenosis. | Fan Z, Zhang L, Wei L, Huang X, Yang M, Xing X. | BMC Pulm Med | 10.1186/s12890-023-02654-7 | 2023 | ||
| Genetics | Genome Characterisation of Invasive Haemophilus influenzae in Pregnancy: The Noticeable Placental Tissue Tropism Is Distributed across the Species Rather Than Linked with Capsulation or Particular Clones. | Norskov-Lauritsen N, Mohey R, Hansen DS, Duus L, Khalil MR, Wilfred SJ, Nielsen SY. | Pathogens | 10.3390/pathogens12111345 | 2023 | |
| Evaluation of Breeding Values and Variance Components of Birth and Weaning Weights in the Holstein Cows Herd Based on Genetic Information. | Hamad Senkal R, Al-Jubori OS, Al-Waith HK. | Arch Razi Inst | 10.22092/ari.2022.357808.2105 | 2022 | ||
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| Tumor protein 53 gene polymorphism, demographic attributes and associated risk factors among liver cancer patients in Calabar, Nigeria. | Ekpenyong BB, Ubi GM, Kooffreh ME, Umoyen AJ, James CS, Ettah IA, Etangetuk NA, Effiom BE, Okpechi PA, Ejue BP, Ambo OA. | BMC Cancer | 10.1186/s12885-025-13803-y | 2025 | ||
| VL-HIV co-infection with Leishmania containing skin lesions resembling para-kala-azar dermal leishmaniasis. | Alves NO, Oshiro JA, Silva YC, Pacher GC, Casaril AE, Rizk YS, Uehara SNO, Paniago AMM, Andrade ILX, Arruda CCP, Oliveira AG. | PLoS Negl Trop Dis | 10.1371/journal.pntd.0012438 | 2024 | ||
| New molecular diagnostic targets for Avibacterium paragallinarum and a set of single-plex and multiplex qPCR methods for the rapid differential diagnosis of Mycoplasma gallisepticum, Mycoplasma synoviae, and Avibacterium paragallinarum. | Xu B, Wang S, Yao W, Ni B, Yuan T, Liu B, Yuan L, Wei Y, Ma S, Lyu L, Wang X, Ouyang W, Zhang Z, Feng Z. | Poult Sci | 10.1016/j.psj.2025.105665 | 2025 | ||
| Adaptation to Host-Specific Bacterial Pathogens Drives Rapid Evolution of a Human Innate Immune Receptor. | Adrian J, Bonsignore P, Hammer S, Frickey T, Hauck CR. | Curr Biol | 10.1016/j.cub.2019.01.058 | 2019 | ||
| PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil. | Pradella GD, Escobar TA, Santos TPD, Vargas RC, Goss GC, Ferrareze PAG, Rosa E Silva LK, Zuravski L, Pereira KB, Duarte CA, Lubeck I. | Rev Bras Parasitol Vet | 10.1590/s1984-29612022035 | 2022 | ||
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| Succession of the multi-site microbiome along pancreatic ductal adenocarcinoma tumorigenesis. | Zhu Y, Liang X, Zhi M, Li L, Zhang G, Chen C, Wang L, Wang P, Zhong N, Feng Q, Li Z. | Front Immunol | 10.3389/fimmu.2024.1487242 | 2024 | ||
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| Exploring the presence of oral bacteria in non-oral sites of patients with cardiovascular diseases using whole metagenomic data. | Chopra A, Franco-Duarte R, Rajagopal A, Choowong P, Soares P, Rito T, Eberhard J, Jayasinghe TN. | Sci Rep | 10.1038/s41598-023-50891-x | 2024 | ||
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| Transcriptome | Placental TLR recognition of salivary and subgingival microbiota is associated with pregnancy complications. | Pax K, Buduneli N, Alan M, Meric P, Gurlek O, Dabdoub SM, Kumar PS. | Microbiome | 10.1186/s40168-024-01761-9 | 2024 | |
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| Tissue Adhesives for the Management of Corneal Perforations and Challenging Corneal Conditions. | Sharma A, Sharma N, Basu S, Sharma R, Aggarwal S, Gupta PC, Ram J, Nirankari VS. | Clin Ophthalmol | 10.2147/opth.s394454 | 2023 | ||
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| Sustained Drug Treatment Alters the Gut Microbiota in Rheumatoid Arthritis. | Mei L, Yang Z, Zhang X, Liu Z, Wang M, Wu X, Chen X, Huang Q, Huang R. | Front Immunol | 10.3389/fimmu.2021.704089 | 2021 | ||
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| Evolution of the paralogous hap and iga genes in Haemophilus influenzae: evidence for a conserved hap pseudogene associated with microcolony formation in the recently diverged Haemophilus aegyptius and H. influenzae biogroup aegyptius. | Kilian M, Poulsen K, Lomholt H. | Mol Microbiol | 10.1046/j.1365-2958.2002.03254.x | 2002 | ||
| Listeria monocytogenes endophthalmitis following keratoconjunctivitis. | Shoughy SS, Tabbara KF. | Clin Ophthalmol | 10.2147/opth.s55710 | 2014 | ||
| Genetics | Whole genome sequencing-based classification of human-related Haemophilus species and detection of antimicrobial resistance genes. | Diricks M, Kohl TA, Kading N, Leshchinskiy V, Hauswaldt S, Jimenez Vazquez O, Utpatel C, Niemann S, Rupp J, Merker M. | Genome Med | 10.1186/s13073-022-01017-x | 2022 | |
| Pathogenicity | Hfe Permease and Haemophilus influenzae Manganese Homeostasis. | Ganio K, Nasreen M, Yang Z, Maunders EA, Luo Z, Hossain SI, Ngu DHY, Ellis D, Gu J, Neville SL, Wilksch J, Gunn AP, Whittall JJ, Kobe B, Deplazes E, Kappler U, McDevitt CA. | ACS Infect Dis | 10.1021/acsinfecdis.3c00407 | 2024 | |
| The etymology of microbial nomenclature and the diseases these cause in a historical perspective. | Yousaf Kazmi S. | Saudi J Biol Sci | 10.1016/j.sjbs.2022.103454 | 2022 | ||
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| A clinical note on Haemophilus aegyptius infection in sheep in Nigeria. | Akpavie SO, Ajuwape AT, Ikheloa JO. | Rev Elev Med Vet Pays Trop | 10.19182/remvt.9104 | 1994 | ||
| Phylogeny | Outer membrane protein profiling to distinguish between Haemophilus aegyptius and non-capsulate Haemophilus influenzae biotype III. | Leaves NI, Anderson EC, Toy SJ. | Br J Biomed Sci | 1994 | ||
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| Anterior Nares Diversity and Pathobionts Represent Sinus Microbiome in Chronic Rhinosinusitis. | De Boeck I, Wittouck S, Martens K, Claes J, Jorissen M, Steelant B, van den Broek MFL, Seys SF, Hellings PW, Vanderveken OM, Lebeer S. | mSphere | 10.1128/msphere.00532-19 | 2019 | ||
| Metabolism | Crystallization and preliminary crystallographic analysis of a DNA (cytosine-5)-methyltransferase from Haemophilus aegyptius bound covalently to DNA. | Reinisch KM, Chen L, Verdine GL, Lipscomb WN. | J Mol Biol | 10.1006/jmbi.1994.1319 | 1994 | |
| Phylogeny | 16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria. | Watts GS, Youens-Clark K, Slepian MJ, Wolk DM, Oshiro MM, Metzger GS, Dhingra D, Cranmer LD, Hurwitz BL. | J Appl Microbiol | 10.1111/jam.13590 | 2017 | |
| Gut Bacteria and Neuropsychiatric Disorders. | Dicks LMT, Hurn D, Hermanus D. | Microorganisms | 10.3390/microorganisms9122583 | 2021 | ||
| [Brazilian purpuric fever, virulence in an animal model of Haemophilus aegyptius (H. influenzae biogroup aegyptius). Grupo de Estudo da Febre Purpúrica Brasileira]. | Brandileone MC, Zanella RC, Tondella ML, Gheesling L, Vieira VS, Carlone GM. | Rev Inst Med Trop Sao Paulo | 1993 | |||
| Histopathological Studies on Rabbits Infected by Bacteria Causing Infectious Keratitis in Human through Eye Inoculation. | Aldebasi YH, Mohamed HA, Aly SM. | Int J Health Sci (Qassim) | 10.12816/0023978 | 2014 | ||
| Enzymology | Types and drug susceptibility patterns of bacterial isolates from eye discharge samples at Gondar University Hospital, Northwest Ethiopia. | Muluye D, Wondimeneh Y, Moges F, Nega T, Ferede G. | BMC Res Notes | 10.1186/1756-0500-7-292 | 2014 | |
| Enzymology | Leishmania amazonensis DNA in wild females of Lutzomyia cruzi (Diptera: Psychodidae) in the state of Mato Grosso do Sul, Brazil. | Oliveira EF, Casaril AE, Mateus NL, Murat PG, Fernandes WS, Oshiro ET, Oliveira AG, Galati EA. | Mem Inst Oswaldo Cruz | 10.1590/0074-02760150317 | 2015 | |
| Metabolism | Increased virulence of the oral microbiome in oral squamous cell carcinoma revealed by metatranscriptome analyses. | Yost S, Stashenko P, Choi Y, Kukuruzinska M, Genco CA, Salama A, Weinberg EO, Kramer CD, Frias-Lopez J. | Int J Oral Sci | 10.1038/s41368-018-0037-7 | 2018 | |
| Differences of lung microbiome in patients with clinically stable and exacerbated bronchiectasis. | Byun MK, Chang J, Kim HJ, Jeong SH. | PLoS One | 10.1371/journal.pone.0183553 | 2017 | ||
| Enzymology | Ecology and significance of Pasteurellaceae in man--an update. | Frederiksen W. | Zentralbl Bakteriol | 10.1016/s0934-8840(11)80488-3 | 1993 | |
| [Epidemiological study of Brazilian purpuric fever. Epidemic in a locality of São Paulo state (Brazil), 1986]. | Kerr-Pontes LR, Ruffino-Netto A. | Rev Saude Publica | 10.1590/s0034-89101991000500009 | 1991 | ||
| [Brazilian purpuric fever. Fast characterization of invasive strains of Haemophilus aegyptius]. | Brandileone MC, Vieira VS, Tondella ML, Sacchi CT, Landgraf IM, Zanella RC, Bibb WF, Irino K. | Rev Inst Med Trop Sao Paulo | 10.1590/s0036-46651989000400003 | 1989 | ||
| Phylogeny | Deoxyribonucleic acid relatedness between Haemophilus aegyptius and Haemophilus influenzae. | Casin I, Grimont F, Grimont PA. | Ann Inst Pasteur Microbiol | 10.1016/s0769-2609(86)80104-1 | 1986 | |
| Endocarditis caused by Haemophilus aegyptius. | Porath A, Wanderman K, Simu A, Vidne B, Alkan M. | Am J Med Sci | 10.1097/00000441-198608000-00009 | 1986 | ||
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| #15433 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21187 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #37737 | ; Curators of the CIP; |
| #48252 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 25716 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66793 | Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 ) |
| #68377 | Automatically annotated from API NH . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #116054 | Collection of Institut Pasteur ; Curators of the CIP; CIP 52.129 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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