Name: Thermobifida alba T-3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11253

Type strain:

Species: Thermobifida alba

Strain Designation: T-3

Culture col. no.: DSM 43185, ATCC 27644, KCC A-0169, JCM 3169, BCRC 13447, CBS 601.73, IFO 14178, IFO 16097, IMSNU 22190, KACC 20102, NBRC 14178, NBRC 16097, NCIMB 11543

Strain history: KCC A-0169 <-- H. Nonomura T-3.

NCBI tax ID(s): 53522 (species)

SI-ID 39104

ATCC 27644, DSM 43185, JCM 3169, CCRC 13447, IFO 14178, IFO 16097, NCIMB 11543, CBS 601.73, NBRC 14178, NBRC 16097, BCRC 13447, KACC 20102

Other strains from Thermobifida alba

T. alba A-0077, 1900, DSM 43795, CECT 3324, ... (type strain)

Section

Thermobifida alba T-3 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Thermobifida*
	Species	**Thermobifida alba**
	Full Scientific Name (LPSN)	Thermobifida alba (Locci et al. 1967) Zhang et al. 1998

	Synonym	"Actinobifida* alba"*
	Synonym	Thermomonospora mesouviformis
	Synonym	Thermomonospora alba

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10852]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #10852]

Culture medium growth

[Ref.: #10852]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #10852]

Culture medium

GYM+S MEDIUM (DSMZ Medium 214)

[Ref.: #10852]

Culture medium growth

[Ref.: #10852]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #10852]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #10852]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-10(H₆), MK-10(H₈), MK-10(H₁₀)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10852]	Sample type/isolated from	soil
[Ref.: #10852]	Geographic location (country and/or sea, region)	Nagano Pref., Takato
[Ref.: #10852]	Country	Japan
[Ref.: #10852]	Country ISO 3 Code	JPN
[Ref.: #10852]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Dry-heated soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Takato, Nagano Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF028247 (>99% sequence identity) for Thermobifida from Microbeatlas

Aquatic Samples	61
Soil Samples	751
Animal Samples	298
Plant Samples	159
Total Samples	1269

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10852]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Thermomonospora mesouviformis 16S ribosomal RNA gene, partial sequence	AF028247	1513	ENA	53522 tax ID	*

Availability in culture collections External links

[Ref.: #10852]

Culture collection no.

DSM 43185, ATCC 27644, KCC A-0169, JCM 3169, BCRC 13447, CBS 601.73, IFO 14178, IFO 16097, IMSNU 22190, KACC 20102, NBRC 14178, NBRC 16097, NCIMB 11543

[Ref.: #80487]

SI-ID 39104

References

#10852

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43185

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80487

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39104.1 )

* These data were automatically processed and therefore are not curated

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